FFCP PHASE1:Hg19::chr14:80090211..80090214,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:80090211..80090214,+ | |||
|description=CAGE_peak_at_chr14:80090211..80090214,+ | |||
|id=chr14:80090211..80090214,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000632;1.71e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,1.83e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.92e-53;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;1.81e-40;1!DOID:3350;5.15e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,2.21e-40,1;DOID:3350,5.70e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.95e-31!57;UBERON:0005068!3.95e-31!57;UBERON:0006241!3.95e-31!57;UBERON:0007135!3.95e-31!57;UBERON:0002616!8.94e-30!59;UBERON:0002020!3.48e-27!34;UBERON:0003528!3.48e-27!34;UBERON:0001869!2.17e-26!32;UBERON:0000955!1.96e-25!69;UBERON:0006238!1.96e-25!69;UBERON:0005743!8.22e-25!86;UBERON:0001017!9.17e-25!82;UBERON:0000073!1.37e-24!94;UBERON:0001016!1.37e-24!94;UBERON:0001893!1.56e-24!34;UBERON:0002791!5.29e-23!33;UBERON:0002780!1.54e-21!41;UBERON:0001890!1.54e-21!41;UBERON:0006240!1.54e-21!41;UBERON:0003080!6.82e-21!42;UBERON:0003075!1.24e-20!86;UBERON:0007284!1.24e-20!86;UBERON:0002619!1.09e-19!22;UBERON:0000956!1.64e-19!25;UBERON:0000203!1.64e-19!25;UBERON:0002346!2.56e-19!90;UBERON:0001950!3.97e-19!20;UBERON:0000033!7.53e-16!123;UBERON:0000153!1.21e-15!129;UBERON:0007811!1.21e-15!129;UBERON:0003056!1.92e-15!61;UBERON:0007023!2.49e-15!115;UBERON:0000200!6.89e-14!6;UBERON:0004121!6.70e-12!169;UBERON:0004733!7.34e-12!12;UBERON:0002028!7.34e-12!12;UBERON:0007277!7.34e-12!12;UBERON:0003076!1.60e-11!15;UBERON:0003057!1.60e-11!15;UBERON:0000924!2.15e-11!173;UBERON:0006601!2.15e-11!173;UBERON:0004732!7.93e-11!13;UBERON:0000369!2.64e-10!4;UBERON:0002435!2.64e-10!4;UBERON:0000204!2.64e-10!4;UBERON:0010082!2.64e-10!4;UBERON:0002298!4.38e-10!8;UBERON:0002308!3.86e-09!9;UBERON:0000125!3.86e-09!9;UBERON:0000025!3.72e-08!194;UBERON:0005383!4.37e-08!3;UBERON:0005382!4.37e-08!3;UBERON:0001872!6.89e-08!5;UBERON:0002771!8.47e-08!3;UBERON:0001896!1.04e-07!3;UBERON:0005290!1.04e-07!3;UBERON:0010096!1.04e-07!3;UBERON:0000988!1.15e-07!3;UBERON:0000064!2.67e-07!219;UBERON:0002680!9.05e-07!9;UBERON:0001895!9.05e-07!9;UBERON:0010092!9.05e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.22e-27;6!UBERON:0002680;1.18e-18;9!UBERON:0001895;1.18e-18;9!UBERON:0004733;2.84e-14;12!UBERON:0002028;2.84e-14;12!UBERON:0004732;2.94e-13;13!UBERON:0001872;3.10e-09;5!UBERON:0000073;4.68e-07;53!UBERON:0002616;4.68e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.82e-27,6;UBERON:0006215,1.82e-27,6;UBERON:0002680,1.03e-18,9;UBERON:0001895,1.03e-18,9;UBERON:0010092,1.03e-18,9;UBERON:0004733,2.57e-14,12;UBERON:0002028,2.57e-14,12;UBERON:0007277,2.57e-14,12;UBERON:0004732,2.68e-13,13;UBERON:0003076,1.15e-11,15;UBERON:0003057,1.15e-11,15;UBERON:0001872,2.97e-09,5;UBERON:0000073,1.99e-07,53;UBERON:0002616,1.99e-07,53;UBERON:0001049,4.48e-07,56;UBERON:0005068,4.48e-07,56;UBERON:0006241,4.48e-07,56;UBERON:0007135,4.48e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0.689486746482929,0,0,0.885741385813839,0.120596438625408,0,2.32216445855572,1.77328571372128,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.247127877893006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0.160753148465019,0,0,0,0,0.364497339948148,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0.886068179966986,0.122026264901963,0.625954653532499,0.573409195690071,0.332787154610557,0.0620964029413835,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.53168342911599,1.04349012362347,0,0,0,0,0,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0.71635536432595,0,0,0,0.192914038270915,0,0,0,0,0.276516872303462,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0.385375350578757,0,0.798169295285756,0,0.252071696221718,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0.135075169236789,0,0.206686796501184,0.19024743058172,1.64092442705466,0,0,0,0,0,0,0,0,0,0,0,0.339848664884159,0.197318320688547,0,0.222462803784138,0,0.628462359664008,0,0,0.215927591218621,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0.5647304101948,0,0,0.154348316215889,0.218559560503957,0,0,0,0.196308467114945,0,0,0.169927114687817,0,0,0,0,0,0,0.730336388246517,0,0,0.946629373159108,0.135982980381829,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:80090211..80090214,+ | |||
}} |
Latest revision as of 23:10, 24 July 2015
Short description: | p@chr14:80090211..80090214, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:80090211..80090214, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 1.83e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.82e-27 | 6 |
rhombic lip | 1.82e-27 | 6 |
regional part of metencephalon | 1.03e-18 | 9 |
metencephalon | 1.03e-18 | 9 |
future metencephalon | 1.03e-18 | 9 |
segmental subdivision of hindbrain | 2.57e-14 | 12 |
hindbrain | 2.57e-14 | 12 |
presumptive hindbrain | 2.57e-14 | 12 |
segmental subdivision of nervous system | 2.68e-13 | 13 |
posterior neural tube | 1.15e-11 | 15 |
chordal neural plate | 1.15e-11 | 15 |
parietal lobe | 2.97e-09 | 5 |
regional part of nervous system | 1.99e-07 | 53 |
regional part of brain | 1.99e-07 | 53 |
neural tube | 4.48e-07 | 56 |
neural rod | 4.48e-07 | 56 |
future spinal cord | 4.48e-07 | 56 |
neural keel | 4.48e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 2.21e-40 | 1 |
mesenchymal cell neoplasm | 5.70e-21 | 2 |