FFCP PHASE1:Hg19::chr15:43559113..43559131,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9333 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11781 | |||
|TSSclassifier=strong | |||
|UniProt=O43548,B4DPS8 | |||
|association_with_transcript=-58bp_to_ENST00000220420,ENST00000349114,NM_004245,NM_201631,uc001zrd.1,uc001zre.1_5end | |||
|cluster_id=chr15:43559113..43559131,- | |||
|coexpression_cluster_id=C1674 | |||
|description=CAGE_peak_2_at_TGM5_5end | |||
|id=chr15:43559113..43559131,- | |||
|ontology_enrichment_celltype=CL:0002541!7.55e-10!3;CL:0001014!9.26e-08!2;CL:0001016!9.26e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0001014;6.34e-22;2!CL:0001016;6.34e-22;2!CL:0002541;1.15e-14;3!CL:0000453;2.41e-09;5!CL:0000840;6.27e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,4.37e-22,2;CL:0001016,4.37e-22,2;CL:0002541,1.32e-14,3;CL:0000453,2.08e-09,5;CL:0000840,5.55e-08,5;CL:0001029,5.55e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0009143;4.53e-12;1!UBERON:0000358;6.97e-12;1!UBERON:0005754;1.25e-11;1!UBERON:0008814;8.93e-07;2!UBERON:0010056;8.93e-07;2 | |||
|ontology_enrichment_disease=DOID:8692!9.65e-08!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!7.55e-10!3;UBERON:0000920!7.55e-10!3;UBERON:0000161!2.42e-08!35;UBERON:0003124!4.04e-07!7;UBERON:0006562!4.65e-07!11;UBERON:0003127!5.34e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.63e-15;3!UBERON:0001033;1.63e-15;3!UBERON:0003124;1.15e-14;3!UBERON:0000920;1.15e-14;3!UBERON:0002372;4.53e-12;1!UBERON:0001961;4.53e-12;1!UBERON:0001744;4.53e-12;1!UBERON:0001042;4.53e-12;1!UBERON:0001735;4.53e-12;1!UBERON:0000998;1.25e-11;1!UBERON:0006868;1.25e-11;1!UBERON:0000002;6.27e-08;6!UBERON:0001560;6.27e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.69e-15,3;UBERON:0001033,1.69e-15,3;UBERON:0010056,1.69e-15,3;UBERON:0000920,1.32e-14,3;UBERON:0002372,3.65e-12,1;UBERON:0001961,3.65e-12,1;UBERON:0001744,3.65e-12,1;UBERON:0001735,3.65e-12,1;UBERON:0000998,1.32e-11,1;UBERON:0006868,1.32e-11,1;UBERON:0001042,2.34e-10,10;UBERON:0009145,2.34e-10,10;UBERON:0006562,1.84e-09,11;UBERON:0000166,4.05e-08,22;UBERON:0000002,7.58e-08,6;UBERON:0001560,7.58e-08,6;UBERON:0003124,9.10e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86101074534246,0,1.33029046061003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34053759092657,0.635020748171649,0,0,0,0.313359791546046,0,0,0.481764225311099,0,2.98092366383228,0,0.307240764308458,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0.724999575434793,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,3.34616986268648,1.00035336054936,0,0,0,0,1.27600463892768,0.0915975934018623,1.06606955203727,0,0,0.166211681900156,0,0,0,0,0,0,2.28525931422807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,3.87956065953678,0,0,0,0,0,0.195551382734803,0.240476460754601,0,0.39961921916426,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.799791132412,3.86900977278975,0,0.670869375198532,0,0,0,0.717149357331379,0,0,0,0,0,0,0,0,0.656740165994712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0.213383459388282,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.366857197043358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.511049710558381,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0.078493092850514,0,0,0,1.07963795609311,0,0,0,0,0,0,0.414432328326074,0,4.83881763269864,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0.198950775161368,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41174371041569,0,0,0.0620747142958579,0,0,0,5.660635445321,4.44903291410865,3.90641907484608,0.502055437748735,0.332660356546013,0,0,0,0,2.34640942403454,0.244482888365733,0.406896178315738,0.665756774185513,0,0 | |||
|short_description=p2@TGM5 | |||
}} |
Latest revision as of 17:12, 17 September 2015
Short description: | p2@TGM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TGM5_5end |
Coexpression cluster: | C1674_tongue_salivary_pagetoid_uterus_cervix_esophagus_skin |
Association with transcript: | -58bp_to_ENST00000220420, ENST00000349114, NM_004245, NM_201631, uc001zrd.1, uc001zre.1_5end |
EntrezGene: | TGM5 |
HGNC: | 11781 |
UniProt: | O43548B4DPS8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 4.37e-22 | 2 |
immature CD1a-positive Langerhans cell | 4.37e-22 | 2 |
chorionic membrane mesenchymal stem cell | 1.32e-14 | 3 |
Langerhans cell | 2.08e-09 | 5 |
immature conventional dendritic cell | 5.55e-08 | 5 |
common dendritic progenitor | 5.55e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
tongue | 1.69e-15 | 3 |
gustatory system | 1.69e-15 | 3 |
future tongue | 1.69e-15 | 3 |
egg chorion | 1.32e-14 | 3 |
tonsil | 3.65e-12 | 1 |
mucosa-associated lymphoid tissue | 3.65e-12 | 1 |
lymphoid tissue | 3.65e-12 | 1 |
tonsillar ring | 3.65e-12 | 1 |
seminal vesicle | 1.32e-11 | 1 |
seminal fluid secreting gland | 1.32e-11 | 1 |
chordate pharynx | 2.34e-10 | 10 |
pharyngeal region of foregut | 2.34e-10 | 10 |
pharynx | 1.84e-09 | 11 |
oral opening | 4.05e-08 | 22 |
uterine cervix | 7.58e-08 | 6 |
neck of organ | 7.58e-08 | 6 |
chorion | 9.10e-07 | 7 |