FFCP PHASE1:Hg19::chr17:39659244..39659257,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3860 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6415 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-232bp_to_ENST00000464634_5end | |||
|cluster_id=chr17:39659244..39659257,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_13_at_KRT13_5end | |||
|id=chr17:39659244..39659257,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.16e-26;1!UBERON:0008814;8.28e-14;2!UBERON:0010056;8.28e-14;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!5.75e-17!3;UBERON:0001033!5.75e-17!3;UBERON:0010056!5.75e-17!3;UBERON:0002372!2.95e-13!1;UBERON:0001961!2.95e-13!1;UBERON:0001744!2.95e-13!1;UBERON:0001735!2.95e-13!1;UBERON:0000996!4.77e-13!1;UBERON:0005418!5.38e-13!1;UBERON:0001389!5.38e-13!1;UBERON:0000026!5.38e-13!1;UBERON:0008784!5.38e-13!1;UBERON:0006058!5.38e-13!1;UBERON:0003663!5.38e-13!1;UBERON:0001383!5.38e-13!1;UBERON:0004256!5.38e-13!1;UBERON:0002529!5.38e-13!1;UBERON:0004708!5.38e-13!1;UBERON:0002101!5.38e-13!1;UBERON:0004709!5.38e-13!1;UBERON:0003661!5.38e-13!1;UBERON:0002471!5.38e-13!1;UBERON:0004357!5.38e-13!1;UBERON:0009872!5.38e-13!1;UBERON:0004347!5.38e-13!1;UBERON:0005420!5.38e-13!1;UBERON:0005732!5.38e-13!1;UBERON:0006057!5.38e-13!1;UBERON:0000978!5.38e-13!1;UBERON:0002103!5.38e-13!1;UBERON:0001665!5.38e-13!1;UBERON:0003823!5.38e-13!1;UBERON:0000154!5.38e-13!1;UBERON:0005733!5.38e-13!1;UBERON:0005730!5.38e-13!1;UBERON:0006834!9.73e-13!1;UBERON:0000997!1.09e-12!1;UBERON:0005056!1.09e-12!1;UBERON:0001042!2.30e-11!10;UBERON:0009145!2.30e-11!10;UBERON:0006562!2.21e-10!11;UBERON:0000002!7.93e-09!6;UBERON:0001560!7.93e-09!6;UBERON:0005795!8.48e-09!22;UBERON:0003975!9.59e-09!22;UBERON:0003134!8.81e-08!37;UBERON:0000474!8.81e-08!37;UBERON:0004175!1.02e-07!25;UBERON:0000341!2.28e-07!2;UBERON:0007023!3.23e-07!115;UBERON:0001630!3.93e-07!2;UBERON:0005090!3.93e-07!2;UBERON:0003127!4.69e-07!2;UBERON:0003100!5.20e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;8.37e-34;3!UBERON:0001033;8.37e-34;3!UBERON:0005795;4.61e-26;1!UBERON:0002372;8.64e-26;1!UBERON:0001961;8.64e-26;1!UBERON:0001744;8.64e-26;1!UBERON:0001042;8.64e-26;1!UBERON:0001735;8.64e-26;1!UBERON:0000002;2.38e-17;6!UBERON:0001560;2.38e-17;6!UBERON:0000341;7.30e-14;2!UBERON:0006562;1.29e-13;2!UBERON:0001043;1.01e-09;3!UBERON:0000165;1.27e-08;28!UBERON:0000995;9.65e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,6.51e-34,3;UBERON:0001033,6.51e-34,3;UBERON:0010056,6.51e-34,3;UBERON:0002372,7.62e-26,1;UBERON:0001961,7.62e-26,1;UBERON:0001744,7.62e-26,1;UBERON:0001735,7.62e-26,1;UBERON:0001042,6.42e-23,10;UBERON:0009145,6.42e-23,10;UBERON:0006562,6.54e-21,11;UBERON:0000002,2.81e-17,6;UBERON:0001560,2.81e-17,6;UBERON:0000341,7.30e-14,2;UBERON:0001557,1.99e-12,19;UBERON:0000166,7.93e-11,22;UBERON:0005795,9.38e-11,22;UBERON:0001043,1.01e-09,3;UBERON:0009143,1.01e-09,3;UBERON:0000165,2.27e-08,29;UBERON:0000930,2.27e-08,29;UBERON:0000161,7.37e-07,36;UBERON:0000153,7.88e-07,62;UBERON:0007811,7.88e-07,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25481369850743,1.38510465306835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,11.1537368961682,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.18378547512845,0,0,0,0,0,0,5.660635445321,1.71116650542641,1.41439311330634,0.502055437748735,0,0,0,0,0,0,0.122241444182866,3.25516942652591,0.665756774185513,0,0 | |||
|short_description=p13@KRT13 | |||
}} |
Latest revision as of 05:27, 20 September 2015
Short description: | p13@KRT13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_KRT13_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -232bp_to_ENST00000464634_5end |
EntrezGene: | KRT13 |
HGNC: | 6415 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 6.51e-34 | 3 |
gustatory system | 6.51e-34 | 3 |
future tongue | 6.51e-34 | 3 |
tonsil | 7.62e-26 | 1 |
mucosa-associated lymphoid tissue | 7.62e-26 | 1 |
lymphoid tissue | 7.62e-26 | 1 |
tonsillar ring | 7.62e-26 | 1 |
chordate pharynx | 6.42e-23 | 10 |
pharyngeal region of foregut | 6.42e-23 | 10 |
pharynx | 6.54e-21 | 11 |
uterine cervix | 2.81e-17 | 6 |
neck of organ | 2.81e-17 | 6 |
throat | 7.30e-14 | 2 |
upper respiratory tract | 1.99e-12 | 19 |
oral opening | 7.93e-11 | 22 |
embryonic uterus | 9.38e-11 | 22 |
esophagus | 1.01e-09 | 3 |
esophageal region | 1.01e-09 | 3 |
mouth | 2.27e-08 | 29 |
stomodeum | 2.27e-08 | 29 |
orifice | 7.37e-07 | 36 |
anterior region of body | 7.88e-07 | 62 |
craniocervical region | 7.88e-07 | 62 |