FFCP PHASE1:Hg19::chr17:41439056..41439060,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:41439056..41439060,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr17:41439056..41439060,+ | |||
|id=chr17:41439056..41439060,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;7.19e-23;3!CL:1000428;7.19e-23;3!CL:0000228;8.72e-18;1!CL:0002372;8.72e-18;1!CL:0002559;3.84e-14;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,5.15e-23,3;CL:1000428,5.15e-23,3;CL:0000228,7.37e-18,1;CL:0002372,7.37e-18,1;CL:0002559,3.15e-14,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.76e-51;3 | |||
|ontology_enrichment_disease=DOID:0050687!2.79e-17!143;DOID:14566!4.63e-12!239;DOID:162!8.77e-12!235;DOID:305!1.36e-11!106;DOID:7!6.34e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:1799;8.72e-18;1!DOID:10165;8.72e-18;1!DOID:1798;8.72e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.44e-17,1;DOID:10165,1.44e-17,1;DOID:1798,1.44e-17,1 | |||
|ontology_enrichment_uberon=UBERON:0000955!1.15e-12!69;UBERON:0006238!1.15e-12!69;UBERON:0000924!8.70e-12!173;UBERON:0006601!8.70e-12!173;UBERON:0002616!1.60e-11!59;UBERON:0001049!2.14e-11!57;UBERON:0005068!2.14e-11!57;UBERON:0006241!2.14e-11!57;UBERON:0007135!2.14e-11!57;UBERON:0004121!8.18e-11!169;UBERON:0000073!8.49e-11!94;UBERON:0001016!8.49e-11!94;UBERON:0001017!1.70e-10!82;UBERON:0002020!2.08e-10!34;UBERON:0003528!2.08e-10!34;UBERON:0001869!2.34e-10!32;UBERON:0001893!2.65e-10!34;UBERON:0002791!5.70e-10!33;UBERON:0005743!1.85e-09!86;UBERON:0002780!3.16e-09!41;UBERON:0001890!3.16e-09!41;UBERON:0006240!3.16e-09!41;UBERON:0003080!7.77e-09!42;UBERON:0002346!1.43e-08!90;UBERON:0000033!1.57e-08!123;UBERON:0000956!1.96e-08!25;UBERON:0000203!1.96e-08!25;UBERON:0002619!6.22e-08!22;UBERON:0001950!7.02e-08!20;UBERON:0003075!1.38e-07!86;UBERON:0007284!1.38e-07!86;UBERON:0000153!1.63e-07!129;UBERON:0007811!1.63e-07!129;UBERON:0003056!7.42e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;6.61e-26;6!UBERON:0000412;7.19e-23;3!UBERON:0001992;7.19e-23;3!UBERON:0002680;1.62e-17;9!UBERON:0001895;1.62e-17;9!UBERON:0002073;3.84e-14;5!UBERON:0004733;2.65e-13;12!UBERON:0002028;2.65e-13;12!UBERON:0004732;2.50e-12;13!UBERON:0001905;1.44e-09;2!UBERON:0002757;1.44e-09;2!UBERON:0010134;1.44e-09;2!UBERON:0005408;1.44e-09;2!UBERON:0001899;1.44e-09;2!UBERON:0002067;2.85e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.62e-26,6;UBERON:0006215,6.62e-26,6;UBERON:0000412,5.15e-23,3;UBERON:0001992,5.15e-23,3;UBERON:0002680,1.62e-17,9;UBERON:0001895,1.62e-17,9;UBERON:0010092,1.62e-17,9;UBERON:0002073,3.15e-14,5;UBERON:0005086,3.15e-14,5;UBERON:0004733,2.65e-13,12;UBERON:0002028,2.65e-13,12;UBERON:0007277,2.65e-13,12;UBERON:0004732,2.50e-12,13;UBERON:0003076,9.14e-11,15;UBERON:0003057,9.14e-11,15;UBERON:0001905,2.02e-09,2;UBERON:0002757,2.02e-09,2;UBERON:0010134,2.02e-09,2;UBERON:0005408,2.02e-09,2;UBERON:0001899,2.02e-09,2;UBERON:0002067,2.55e-08,9;UBERON:0004016,2.55e-08,9;UBERON:0010083,2.55e-08,9;UBERON:0000073,9.70e-08,53;UBERON:0002616,9.70e-08,53;UBERON:0010371,2.42e-07,104;UBERON:0001049,2.49e-07,56;UBERON:0005068,2.49e-07,56;UBERON:0006241,2.49e-07,56;UBERON:0007135,2.49e-07,56 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0.189069634328136,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0.300476117813194,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0.184099797284599,0,0,0.10075209822764,0.169560592310488,0,0,0,0.121973706129595,0,0,0,0,0,1.56449532329816,0,1.38134921352481,0.464367928031979,0,0.236613600079688,0.337169380156203,0,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,1.14861935834114,1.42636905040718,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0.500170521059677,0,0.207970861530807,0.356857977594324,0.630809660135739,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.164254312027618,0,0,0,0,0.0920809889358963,0,0.182091168006717,0.131124414959424,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0.354761064070598,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.490080431962063,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0.422250816255987,0.796991953004279,0,0.251932747854276,0.102268682502155,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0.689486746482929,0,0,0,0.361789315876224,9.15490417902499,7.07707263559838,2.06883333267483,0,0.21787692703798,0.139423744278603,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,0,0,0.971121518136371,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0.171986032471617,0.967563312890852,0.950161122120412,0.492692742319255,0,0,0.451961481561065,0.685209623233754,0.397429223405979,0.126621591911757,0,0.0801588202515337,0,0.19980960958213,0,0,0.171594997861965,0,0.248505071130865,0,0.543616824294456,0.209205692624666,0.305994652908965,0,0,0.958337652243951,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0.0671834724867263,0,0,0.236349546921671,0.0824158583811665,0.13480708770837,0.590564889088493,0.169346664131569,0,0.272406812223151,0,0,0,0,0,0,0.335434687599266,0.0788057072991982,0,0.211200673038813,0.35857467866569,0.191915197319445,0,0,0.5085370753095,0,0,0.326587360109409,0,0,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0.250381861413,0.573409195690071,0.998361463831671,0,0.138348634936231,0.249960815924213,0.758245587708239,0.856396000634902,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0.449803112163605,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0.244736704506468,0.358177682162975,0.617602894321944,0.219284049578707,0.176689145945881,0,0.337884881306145,0,0,0,0.829550616910385,0,0,0,0.655219697692825,0,0,0,0,0,0,0.184105950251841,0,0,0.511577485214607,0,0.314531883711793,0.327628914576042,0,1.91317428091515,0.123935764259002,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0.638535436228605,0.41023272848151,0.504143392443436,0.138314504928436,0.161475645631851,0,0,0,0.917142992608395,0.231051332300676,0,0,0,0.0752103283492573,0.60511520611056,0,1.04762677792569,0.818859587550484,0,0.0675375846183947,0.781078098613847,0.620060389503552,0.126831620387814,1.09394961803644,0,0,0.175871244359621,0.255524855279191,0,1.00885116665647,0,0,0,0.115233987555779,0.171488009437418,0,0.0657727735628491,0.472775363535873,0.333694205676207,0,0.942693539496011,0,0,0.215927591218621,1.43325506366115,0,0,0,0.347716544605159,0.801711364730253,0.414432328326074,0.3414369541879,0,0,0.236664001461131,0,0,0.22910686854405,0,0,0.111855431797792,0,0,0.647428837187895,0,0,0.971421986118279,0,0.198950775161368,0,0.11294608203896,0,0,0.0771741581079447,0.655678681511872,0,0.735444965261716,0.235676547101626,0,0.891139200981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| |||
|short_description=p@chr17:41439056..41439060,+ | |||
}} |
Latest revision as of 17:13, 25 July 2015
Short description: | p@chr17:41439056..41439060, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:41439056..41439060, + |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 5.15e-23 | 3 |
stem cell of epidermis | 5.15e-23 | 3 |
multinucleate cell | 7.37e-18 | 1 |
myotube | 7.37e-18 | 1 |
hair follicle cell | 3.15e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 6.62e-26 | 6 |
rhombic lip | 6.62e-26 | 6 |
dermal papilla | 5.15e-23 | 3 |
papillary layer of dermis | 5.15e-23 | 3 |
regional part of metencephalon | 1.62e-17 | 9 |
metencephalon | 1.62e-17 | 9 |
future metencephalon | 1.62e-17 | 9 |
hair follicle | 3.15e-14 | 5 |
hair follicle placode | 3.15e-14 | 5 |
segmental subdivision of hindbrain | 2.65e-13 | 12 |
hindbrain | 2.65e-13 | 12 |
presumptive hindbrain | 2.65e-13 | 12 |
segmental subdivision of nervous system | 2.50e-12 | 13 |
posterior neural tube | 9.14e-11 | 15 |
chordal neural plate | 9.14e-11 | 15 |
pineal body | 2.02e-09 | 2 |
regional part of epithalamus | 2.02e-09 | 2 |
secretory circumventricular organ | 2.02e-09 | 2 |
circumventricular organ | 2.02e-09 | 2 |
epithalamus | 2.02e-09 | 2 |
dermis | 2.55e-08 | 9 |
dermatome | 2.55e-08 | 9 |
future dermis | 2.55e-08 | 9 |
regional part of nervous system | 9.70e-08 | 53 |
regional part of brain | 9.70e-08 | 53 |
ecto-epithelium | 2.42e-07 | 104 |
neural tube | 2.49e-07 | 56 |
neural rod | 2.49e-07 | 56 |
future spinal cord | 2.49e-07 | 56 |
neural keel | 2.49e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.44e-17 | 1 |
endocrine pancreas cancer | 1.44e-17 | 1 |
pancreatic endocrine carcinoma | 1.44e-17 | 1 |