FFCP PHASE1:Hg19::chr8:48581816..48581820,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:48581816..48581820,-
|short_description=p@chr8:48581816..48581820,-
|description=CAGE_peak_at_chr8:48581816..48581820,-
|association_with_transcript=NA
|E...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:48581816..48581820,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr8:48581816..48581820,- | |||
|id=chr8:48581816..48581820,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;6.72e-26;1!CL:0002623;1.47e-09;3!CL:0000182;2.71e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,9.79e-26,1;CL:0002623,1.54e-09,3;CL:0000182,2.66e-09,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.92e-23!115;UBERON:0002780!1.93e-14!41;UBERON:0001890!1.93e-14!41;UBERON:0006240!1.93e-14!41;UBERON:0001869!2.00e-14!32;UBERON:0003080!5.16e-14!42;UBERON:0002791!6.64e-14!33;UBERON:0002020!2.05e-13!34;UBERON:0003528!2.05e-13!34;UBERON:0001893!2.05e-13!34;UBERON:0000955!3.03e-13!69;UBERON:0006238!3.03e-13!69;UBERON:0000153!4.60e-13!129;UBERON:0007811!4.60e-13!129;UBERON:0001049!2.61e-12!57;UBERON:0005068!2.61e-12!57;UBERON:0006241!2.61e-12!57;UBERON:0007135!2.61e-12!57;UBERON:0001950!2.93e-12!20;UBERON:0002616!9.37e-12!59;UBERON:0000033!1.07e-11!123;UBERON:0003075!2.93e-11!86;UBERON:0007284!2.93e-11!86;UBERON:0002619!5.09e-11!22;UBERON:0002346!1.57e-10!90;UBERON:0001017!2.09e-10!82;UBERON:0003056!6.75e-10!61;UBERON:0002771!7.23e-10!3;UBERON:0005743!1.05e-09!86;UBERON:0000956!1.61e-09!25;UBERON:0000203!1.61e-09!25;UBERON:0000481!1.00e-08!347;UBERON:0000073!2.35e-08!94;UBERON:0001016!2.35e-08!94;UBERON:0004111!4.73e-08!241;UBERON:0000025!5.45e-08!194;UBERON:0003127!1.71e-07!2;UBERON:0004121!1.86e-07!169;UBERON:0000477!3.19e-07!286;UBERON:0000924!3.86e-07!173;UBERON:0006601!3.86e-07!173;UBERON:0000369!4.41e-07!4;UBERON:0002435!4.41e-07!4;UBERON:0000204!4.41e-07!4;UBERON:0010082!4.41e-07!4;UBERON:0000475!4.70e-07!365;UBERON:0009663!5.17e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;1.13e-13;31!UBERON:0002330;1.13e-13;31!UBERON:0000078;1.14e-13;2!UBERON:0002012;1.14e-13;2!UBERON:0008886;1.14e-13;2!UBERON:0002107;1.84e-12;19!UBERON:0006925;1.84e-12;19!UBERON:0002423;1.24e-09;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,1.37e-13,2;UBERON:0007497,1.37e-13,2;UBERON:0003643,1.37e-13,2;UBERON:0003504,1.37e-13,2;UBERON:0003469,1.37e-13,2;UBERON:0003496,1.37e-13,2;UBERON:0002012,1.37e-13,2;UBERON:0008886,1.37e-13,2;UBERON:0007303,1.37e-13,2;UBERON:0002061,1.37e-13,2;UBERON:0005432,1.37e-13,2;UBERON:0004363,1.37e-13,2;UBERON:0002365,2.88e-13,31;UBERON:0002330,2.88e-13,31;UBERON:0002107,1.70e-12,19;UBERON:0006925,1.70e-12,19;UBERON:0008836,1.70e-12,19;UBERON:0008835,6.93e-11,22;UBERON:0003894,6.93e-11,22;UBERON:0009854,1.93e-10,23;UBERON:0007499,1.17e-09,25;UBERON:0009497,1.17e-09,25;UBERON:0000015,1.17e-09,25;UBERON:0002423,1.17e-09,25;UBERON:0006235,1.17e-09,25;UBERON:0004161,1.17e-09,25;UBERON:0004145,1.67e-09,3;UBERON:0009856,2.59e-09,26;UBERON:0003929,8.77e-08,54;UBERON:0001041,2.39e-07,87;UBERON:0002530,3.68e-07,59;UBERON:0002368,4.48e-07,35 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0,0,0,0,0,0.622422070799533,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,3.54473944008842,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.854738209659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2594512186427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0.279282401272254,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0,1.46552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.500763722825999,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413373593002368,0.126831620387814,0,0,0,0,0,0,0,0,0.682986574053893,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0.62164849248911,1.19502933965765,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0.639701945702943,0,0,0.31037357147929,0,0.318235791390825,0,0,0,0.0673520530145875,0.286888821570705,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0,0,0,0,0,0.622422070799533,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,3.54473944008842,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.854738209659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2594512186427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0.279282401272254,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0,1.46552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.500763722825999,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413373593002368,0.126831620387814,0,0,0,0,0,0,0,0,0.682986574053893,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0.62164849248911,1.19502933965765,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0.639701945702943,0,0,0.31037357147929,0,0.318235791390825,0,0,0,0.0673520530145875,0.286888821570705,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:48581816..48581820,- | |||
}} | }} |
Latest revision as of 18:42, 31 July 2015
Short description: | p@chr8:48581816..48581820, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:48581816..48581820, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 9.79e-26 | 1 |
acinar cell of salivary gland | 1.54e-09 | 3 |
hepatocyte | 2.66e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 1.37e-13 | 2 |
developing epithelial placode | 1.37e-13 | 2 |
respiratory system arterial blood vessel | 1.37e-13 | 2 |
respiratory system blood vessel | 1.37e-13 | 2 |
respiratory system artery | 1.37e-13 | 2 |
head blood vessel | 1.37e-13 | 2 |
pulmonary artery | 1.37e-13 | 2 |
pulmonary vascular system | 1.37e-13 | 2 |
pharyngeal vasculature | 1.37e-13 | 2 |
truncus arteriosus | 1.37e-13 | 2 |
aortic sac | 1.37e-13 | 2 |
pharyngeal arch artery | 1.37e-13 | 2 |
exocrine gland | 2.88e-13 | 31 |
exocrine system | 2.88e-13 | 31 |
liver | 1.70e-12 | 19 |
digestive gland | 1.70e-12 | 19 |
liver bud | 1.70e-12 | 19 |
hepatic diverticulum | 6.93e-11 | 22 |
liver primordium | 6.93e-11 | 22 |
digestive tract diverticulum | 1.93e-10 | 23 |
epithelial sac | 1.17e-09 | 25 |
epithelium of foregut-midgut junction | 1.17e-09 | 25 |
anatomical boundary | 1.17e-09 | 25 |
hepatobiliary system | 1.17e-09 | 25 |
foregut-midgut junction | 1.17e-09 | 25 |
septum transversum | 1.17e-09 | 25 |
outflow tract | 1.67e-09 | 3 |
sac | 2.59e-09 | 26 |
gut epithelium | 8.77e-08 | 54 |
foregut | 2.39e-07 | 87 |
gland | 3.68e-07 | 59 |
endocrine gland | 4.48e-07 | 35 |