FFCP PHASE1:Hg19::chr17:77030376..77030391,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114897 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14324 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BXJ1 | |||
|association_with_transcript=-80bp_to_ENST00000392444,NM_198593,uc002jws.2_5end | |||
|cluster_id=chr17:77030376..77030391,+ | |||
|description=CAGE_peak_9_at_C1QTNF1_5end | |||
|id=chr17:77030376..77030391,+ | |||
|ontology_enrichment_celltype=CL:0002159!2.14e-13!13;CL:0000346!1.66e-07!3;CL:1000428!1.66e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000346;2.00e-24;3!CL:1000428;2.00e-24;3!CL:0000317;4.07e-16;2!CL:1000448;4.07e-16;2!CL:0002308;4.07e-16;2!CL:0002140;4.07e-16;2!CL:0002559;6.73e-15;5!CL:0002621;4.65e-11;3!CL:0002159;7.44e-09;14!CL:0000362;3.96e-08;9!CL:0000622;5.64e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,2.26e-24,3;CL:1000428,2.26e-24,3;CL:0000317,2.37e-16,2;CL:1000448,2.37e-16,2;CL:0002308,2.37e-16,2;CL:0002140,2.37e-16,2;CL:0002559,7.24e-15,5;CL:0002621,6.65e-11,3;CL:0002159,7.60e-09,14;CL:0000362,3.55e-08,9;CL:0000221,4.39e-07,72;CL:0000622,4.56e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.49e-20;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!5.02e-19!9;UBERON:0001557!1.59e-15!19;UBERON:0001003!2.12e-15!14;UBERON:0007376!2.12e-15!14;UBERON:0007383!2.12e-15!14;UBERON:0004121!1.25e-13!169;UBERON:0000924!5.10e-13!173;UBERON:0006601!5.10e-13!173;UBERON:0000153!3.60e-09!129;UBERON:0007811!3.60e-09!129;UBERON:0000064!3.72e-09!219;UBERON:0000033!1.13e-08!123;UBERON:0000062!2.20e-08!511;UBERON:0005085!2.43e-08!29;UBERON:0001048!3.32e-08!168;UBERON:0000467!5.93e-08!625;UBERON:0000480!6.68e-08!626;UBERON:0000063!1.66e-07!97;UBERON:0000412!1.66e-07!3;UBERON:0001992!1.66e-07!3;UBERON:0000072!4.71e-07!46;UBERON:0000468!9.16e-07!659;UBERON:0007023!9.64e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.66e-68;9!UBERON:0001557;2.66e-68;9!UBERON:0000412;2.00e-24;3!UBERON:0001992;2.00e-24;3!UBERON:0000072;9.81e-19;37!UBERON:0001003;3.94e-18;15!UBERON:0007376;3.94e-18;15!UBERON:0002419;4.07e-16;2!UBERON:0007771;4.07e-16;2!UBERON:0003297;4.07e-16;2!UBERON:0001821;4.07e-16;2!UBERON:0003487;4.07e-16;2!UBERON:0001820;4.07e-16;2!UBERON:0000065;2.25e-15;44!UBERON:0002073;6.73e-15;5!UBERON:0010371;2.84e-14;31!UBERON:0001949;4.65e-11;3!UBERON:0001004;3.80e-09;65!UBERON:0002067;1.69e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.40e-69,9;UBERON:0001557,4.90e-32,19;UBERON:0000412,2.26e-24,3;UBERON:0001992,2.26e-24,3;UBERON:0008947,5.13e-19,38;UBERON:0003258,5.13e-19,38;UBERON:0001003,3.61e-18,15;UBERON:0007376,3.61e-18,15;UBERON:0007383,3.61e-18,15;UBERON:0002419,2.37e-16,2;UBERON:0007771,2.37e-16,2;UBERON:0003297,2.37e-16,2;UBERON:0001821,2.37e-16,2;UBERON:0003487,2.37e-16,2;UBERON:0001820,2.37e-16,2;UBERON:0005089,2.37e-16,2;UBERON:0005088,2.37e-16,2;UBERON:0000072,4.59e-15,47;UBERON:0002073,7.24e-15,5;UBERON:0005086,7.24e-15,5;UBERON:0001004,5.32e-13,74;UBERON:0000065,6.70e-13,54;UBERON:0001949,6.65e-11,3;UBERON:0001048,1.67e-09,160;UBERON:0005085,1.59e-08,31;UBERON:0002067,1.76e-08,9;UBERON:0004016,1.76e-08,9;UBERON:0010083,1.76e-08,9;UBERON:0001041,2.17e-07,87 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0,0,0,0,1.09288586487763,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0.605429710579726,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,1.09098448236334,1.43402297694502,0,0,0,0,0,0,6.25798129319264,5.14592750554308,1.38134921352481,0,0,2.24782920075703,1.85443159085912,1.44606617930089,2.31617342738027,1.96091499683166,2.60997681022206,2.02246962240247,1.96221465125346,2.30848294167834,0,0,0,0,0,0.982827216677626,0,0,0,0,1.31700342490351,0,0.100528972411631,0.185176890317059,0,0,0,0.115930404975077,0,0.288732895522148,0,1.14152491340759,0,0,0,0,0,0.93733833986777,0.16798212819886,0.708875486211932,0.0895585227028483,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587403472388222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,1.72279661398852,1.95018073810956,0,0.096670718292122,0,0,0,0,0,0,1.06838442776085,0.165284915360978,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0.21787692703798,0,0,0,0,0,0,0.31900115973192,0.457987967009312,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,0.695052375913368,0,0,1.99396161812156,0.330991955875499,0.941798755221676,1.19472429772959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,2.03856309110421,1.46443984837266,0,0,0,0,0,0,0,0.558564802544508,0,0.717873024576814,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.18628920882415,0,0,0.151649117541648,0.570930667089935,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0.591420599958536,0,0.449803112163605,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0.695433089210318,0,0,0,0,0,0,0,0.423387050190929,0,0.31020638566432,0,0,0,0,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917458566809082,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0.217716747896961,0,0.471464371102113,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p9@C1QTNF1 | |||
}} |
Latest revision as of 00:04, 18 September 2015
Short description: | p9@C1QTNF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_C1QTNF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -80bp_to_ENST00000392444, NM_198593, uc002jws.2_5end |
EntrezGene: | C1QTNF1 |
HGNC: | 14324 |
UniProt: | Q9BXJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 2.26e-24 | 3 |
stem cell of epidermis | 2.26e-24 | 3 |
sebum secreting cell | 2.37e-16 | 2 |
epithelial cell of sweat gland | 2.37e-16 | 2 |
epithelial cell of skin gland | 2.37e-16 | 2 |
acinar cell of sebaceous gland | 2.37e-16 | 2 |
hair follicle cell | 7.24e-15 | 5 |
gingival epithelial cell | 6.65e-11 | 3 |
general ecto-epithelial cell | 7.60e-09 | 14 |
epidermal cell | 3.55e-08 | 9 |
ectodermal cell | 4.39e-07 | 72 |
acinar cell | 4.56e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.40e-69 | 9 |
upper respiratory tract | 4.90e-32 | 19 |
dermal papilla | 2.26e-24 | 3 |
papillary layer of dermis | 2.26e-24 | 3 |
respiratory primordium | 5.13e-19 | 38 |
endoderm of foregut | 5.13e-19 | 38 |
skin epidermis | 3.61e-18 | 15 |
outer epithelium | 3.61e-18 | 15 |
enveloping layer of ectoderm | 3.61e-18 | 15 |
skin gland | 2.37e-16 | 2 |
epidermis gland | 2.37e-16 | 2 |
gland of integumental system | 2.37e-16 | 2 |
sebaceous gland | 2.37e-16 | 2 |
skin sebaceous gland | 2.37e-16 | 2 |
sweat gland | 2.37e-16 | 2 |
sweat gland placode | 2.37e-16 | 2 |
sebaceous gland placode | 2.37e-16 | 2 |
segment of respiratory tract | 4.59e-15 | 47 |
hair follicle | 7.24e-15 | 5 |
hair follicle placode | 7.24e-15 | 5 |
respiratory system | 5.32e-13 | 74 |
respiratory tract | 6.70e-13 | 54 |
gingival epithelium | 6.65e-11 | 3 |
primordium | 1.67e-09 | 160 |
ectodermal placode | 1.59e-08 | 31 |
dermis | 1.76e-08 | 9 |
dermatome | 1.76e-08 | 9 |
future dermis | 1.76e-08 | 9 |
foregut | 2.17e-07 | 87 |