FFCP PHASE1:Hg19::chr18:6729666..6729693,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79822 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25509 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-127bp_to_ENST00000400091_5end | |||
|cluster_id=chr18:6729666..6729693,+ | |||
|coexpression_cluster_id=C3738 | |||
|description=CAGE_peak_2_at_ARHGAP28_5end | |||
|id=chr18:6729666..6729693,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.60e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000188;1.87e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,3.14e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!6.45e-11!347;UBERON:0000468!2.83e-07!659;UBERON:0000922!4.30e-07!612;UBERON:0000475!7.81e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.94e-09;16!UBERON:0002036;1.94e-09;16!UBERON:0004905;6.51e-08;8!UBERON:0000982;6.51e-08;8!UBERON:0004770;6.51e-08;8!UBERON:0011135;4.69e-07;5!UBERON:0002216;4.69e-07;5!UBERON:0011134;4.69e-07;5!UBERON:0002209;4.69e-07;5!UBERON:0002213;4.69e-07;5!UBERON:0007844;4.69e-07;5!UBERON:0011138;4.69e-07;5!UBERON:0001130;4.69e-07;5!UBERON:0001066;4.69e-07;5!UBERON:0001468;4.69e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,6.63e-08,8;UBERON:0000982,6.63e-08,8;UBERON:0004770,6.63e-08,8;UBERON:0011135,4.69e-07,5;UBERON:0002216,4.69e-07,5;UBERON:0011134,4.69e-07,5;UBERON:0002209,4.69e-07,5;UBERON:0002213,4.69e-07,5;UBERON:0005856,4.69e-07,5;UBERON:0005866,4.69e-07,5;UBERON:0005863,4.69e-07,5;UBERON:0007844,4.69e-07,5;UBERON:0011138,4.69e-07,5;UBERON:0001130,4.69e-07,5;UBERON:0001066,4.69e-07,5;UBERON:0001468,4.69e-07,5 | |||
|phase1_expression=0.908391896352783,0.642301571672949,0.986680828671798,2.00146596706261,2.23480547213644,2.61701557230111,0,0.631719873426831,1.56711376919903,0.245733936501509,0,0.436882744260345,0,7.79728023648294,13.2558950291166,0,0,0,0,1.23121058076788,1.02000345622126,1.25381888591235,0.286235987131057,0.684372125364421,0.251085279189606,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.66221330396589,0.361439152384566,0.50133791063589,0.579386075843295,0.795285947051099,1.45990461090791,0.850813354476611,1.10864698731282,1.14185221401064,1.11332214173056,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,0.56530794192401,0.419499436209906,0,0.208994966536811,0,0.71153252537342,2.34304428935269,1.20848795132744,0.760272105718513,0.24406205754817,0.367663080345869,0,1.96459402224975,4.04152870727106,3.15312145353302,0,0.949265659568129,3.11442964681692,0,0,0,0,0,0.794455084879313,0,0.709336764396714,2.80338800071154,1.06748995729705,0,2.8008993185979,0.269421344139376,0.326923806226917,2.72443369760877,8.06646294271999,0.70296429550139,1.87296046098192,0.570471821544449,0.149448680551801,0.939475989150119,2.5899671098901,1.82586048712923,2.44985005505872,1.96534907698829,4.85631171526098,1.18800285728205,0.494533858557114,0,0,2.69337782326506,2.12701483782339,0.554128230968366,0.877955241761676,0,1.50238058906597,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0.515281080091258,0,0,0.194874010322397,0.757301322732344,0.460249493211497,1.93975268182574,0.355009592516614,0,0.508681776931463,0,0.272746120590835,0,0.975789649036763,0.927708378250397,2.78865462886844,2.48786532036889,1.26160425437814,2.91981887260664,0,2.57296375277154,0,0,0,0.709840800239063,1.34867752062481,0.964044119533928,0.992645754591546,0.653638332277218,1.18635309555548,1.34831308160164,0.98110732562673,0.38474715694639,0.738155454624648,0,1.2347220339942,1.47008711385542,0,0,0,0,2.95172252503473,0.343135620597051,0.109750285408626,0,0,0,0.651616610620649,0,0,0.463721619900307,0.70445216541493,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0.503946384596579,0.425325291727159,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0.285826432630578,0.560655421726804,1.74384027533312,0.95339771567235,0.258543431515556,0,0,0,0,1.28603687131071,0,0.799266537048298,0.714889968290738,0,0,0.65147236858747,0.710783897485092,0,0,0.871533458600294,0.899756920638513,0,0,0,0,2.29723871668228,1.42636905040718,0,0.61642896765115,1.07436577943937,0,0,0,0,0.508189248444927,0,1.54657762555539,0.502548796003046,0.637938751653163,0,0,0,6.74803204455269,5.50187573165645,7.86668568729233,1.03985430765404,0.713715955188647,0.473107245101804,0.234282829985426,3.31040709700491,2.27407504055985,0,1.32845119707087,2.39679919104214,1.39013783148933,1.95801157462741,2.05886054286514,0,0,0,0.303127571446259,1.66435439510497,0.907170879989041,1.48864684691266,1.38115775959256,0.841980283299221,1.02511319404561,1.02341449813341,0,0,0.154209693802656,0.532685175939381,1.06765302817952,0.519254429183621,0.929683027679674,3.14234568938218,0,0.460404944679482,0.918515585316854,1.45672934405374,1.70461739447251,0.451199612907412,0.385076685522074,0.784349769176855,0,0.211103257785751,0,0.340187410553031,1.0795795805107,0,0.541892875087706,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0.650756789328606,1.03041011647722,1.73981983154852,1.32015199872941,0,0,0,1.06337790121334,3.23502095940753,3.37708084397485,1.24052915236078,1.39646318328756,2.90033387828457,2.21589231281862,3.11612124763581,0,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,7.07100901783368,1.89827654831236,0.190630193923825,0.511795582622668,5.99114583247489,0.636406495851874,0,1.97859703341646,2.47083326762449,2.12062324222236,0,0,0,0.975267478179181,0,0,1.9109987597118,0,2.26016233240486,0,0,0,0,7.87073702455959,0,0.30982349809975,0.281695602532241,0.573645408816206,0.589494246078727,0,1.41904425628239,0.422215270595328,13.1717957183961,2.65631221636001,1.39973888097993,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,1.92495971052672,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0.121360521749513,2.45175445410452,0,0.71623345421307,2.96964680832639,2.15012491469462,0,0.422008249231538,0.333926115068718,0,0.211125408127993,0.796991953004279,0.552567831062295,0,0,0,0,0,0.358042349351218,0,0.690503839458535,0,1.11136990144637,0.969332746095218,0.463840490809256,0,0,0.437299999980979,0.724999575434793,0,0,3.30942754475111,2.41320361269025,1.16641845353302,0.347249989866585,0,0.723578631752448,0,1.21637185924347,0.295547618953547,0.219385397153973,0.10893846351899,0.139423744278603,4.92481654424301,0.227884111694002,1.38338342632836,1.6156375993759,0,0.957003479195758,0.824378340616761,0,0,0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| |||
|short_description=p2@ARHGAP28 | |||
}} |
Latest revision as of 06:33, 20 September 2015
Short description: | p2@ARHGAP28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARHGAP28_5end |
Coexpression cluster: | C3738_medulloblastoma_leiomyoblastoma_normal_tridermal_colon_synovial_rhabdomyosarcoma |
Association with transcript: | -127bp_to_ENST00000400091_5end |
EntrezGene: | ARHGAP28 |
HGNC: | 25509 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 3.14e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
articulation | 6.63e-08 | 8 |
skeletal joint | 6.63e-08 | 8 |
articular system | 6.63e-08 | 8 |
intervertebral cartilage | 4.69e-07 | 5 |
symphysis | 4.69e-07 | 5 |
nonsynovial joint | 4.69e-07 | 5 |
fibrous joint | 4.69e-07 | 5 |
cartilaginous joint | 4.69e-07 | 5 |
developing mesenchymal condensation | 4.69e-07 | 5 |
pre-cartilage condensation | 4.69e-07 | 5 |
cartilaginous condensation | 4.69e-07 | 5 |
cartilage element | 4.69e-07 | 5 |
post-cranial axial skeletal system | 4.69e-07 | 5 |
vertebral column | 4.69e-07 | 5 |
intervertebral disk | 4.69e-07 | 5 |
intervertebral joint | 4.69e-07 | 5 |