FFCP PHASE1:Hg19::chr19:39390212..39390305,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22933 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10886 | |||
|TSSclassifier=strong | |||
|UniProt=F8WDM4,C9J3U7,F8WF57 | |||
|association_with_transcript=0bp_to_ENST00000423526,ENST00000437828,ENST00000451193,ENST00000481381,ENST00000491960_5end | |||
|cluster_id=chr19:39390212..39390305,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_SIRT2_5end | |||
|id=chr19:39390212..39390305,- | |||
|ontology_enrichment_celltype=CL:0000115!1.21e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000115;7.95e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,5.19e-08,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.24e-29!115;UBERON:0001049!6.82e-24!57;UBERON:0005068!6.82e-24!57;UBERON:0006241!6.82e-24!57;UBERON:0007135!6.82e-24!57;UBERON:0002616!3.76e-22!59;UBERON:0003075!2.35e-21!86;UBERON:0007284!2.35e-21!86;UBERON:0002346!1.97e-19!90;UBERON:0005743!3.06e-19!86;UBERON:0000955!7.28e-19!69;UBERON:0006238!7.28e-19!69;UBERON:0001017!2.11e-18!82;UBERON:0003080!3.94e-16!42;UBERON:0002780!9.65e-16!41;UBERON:0001890!9.65e-16!41;UBERON:0006240!9.65e-16!41;UBERON:0000153!1.84e-15!129;UBERON:0007811!1.84e-15!129;UBERON:0000073!7.49e-15!94;UBERON:0001016!7.49e-15!94;UBERON:0000033!7.61e-15!123;UBERON:0001893!9.27e-15!34;UBERON:0002020!9.72e-15!34;UBERON:0003528!9.72e-15!34;UBERON:0003056!1.09e-14!61;UBERON:0002791!3.56e-14!33;UBERON:0000119!1.44e-13!312;UBERON:0000025!1.64e-13!194;UBERON:0001869!1.81e-13!32;UBERON:0000483!1.89e-13!309;UBERON:0004111!2.11e-13!241;UBERON:0002619!3.78e-12!22;UBERON:0004121!6.85e-12!169;UBERON:0000924!4.55e-11!173;UBERON:0006601!4.55e-11!173;UBERON:0001950!4.82e-11!20;UBERON:0000475!1.14e-09!365;UBERON:0000477!1.16e-09!286;UBERON:0000956!1.27e-09!25;UBERON:0000203!1.27e-09!25;UBERON:0000467!2.69e-09!625;UBERON:0003076!3.85e-09!15;UBERON:0003057!3.85e-09!15;UBERON:0000480!4.85e-09!626;UBERON:0002050!5.31e-09!605;UBERON:0005423!5.31e-09!605;UBERON:0000923!5.49e-09!604;UBERON:0005291!5.49e-09!604;UBERON:0006598!5.49e-09!604;UBERON:0002532!5.49e-09!604;UBERON:0000468!5.97e-09!659;UBERON:0000922!3.45e-08!612;UBERON:0004732!7.40e-08!13;UBERON:0004733!3.41e-07!12;UBERON:0002028!3.41e-07!12;UBERON:0007277!3.41e-07!12;UBERON:0002308!6.49e-07!9;UBERON:0000125!6.49e-07!9;UBERON:0002420!8.88e-07!9;UBERON:0007245!8.88e-07!9;UBERON:0010009!8.88e-07!9;UBERON:0010011!8.88e-07!9;UBERON:0000454!8.88e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.05e-12;53!UBERON:0002616;1.05e-12;53!UBERON:0001893;1.24e-12;34!UBERON:0003528;2.12e-12;34!UBERON:0002020;2.12e-12;34!UBERON:0002619;3.65e-12;22!UBERON:0002791;4.91e-12;32!UBERON:0001869;5.43e-12;32!UBERON:0002780;1.38e-11;41!UBERON:0001890;1.38e-11;41!UBERON:0001950;4.66e-11;20!UBERON:0000956;1.15e-09;25!UBERON:0000203;1.15e-09;25!UBERON:0001017;2.09e-09;75!UBERON:0000955;3.02e-08;68!UBERON:0004732;7.57e-08;13!UBERON:0007023;1.19e-07;114!UBERON:0004733;3.49e-07;12!UBERON:0002028;3.49e-07;12!UBERON:0000125;6.51e-07;9!UBERON:0002308;6.51e-07;9!UBERON:0002420;8.88e-07;9!UBERON:0007245;8.88e-07;9!UBERON:0010009;8.88e-07;9!UBERON:0010011;8.88e-07;9!UBERON:0000454;8.88e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.57e-29,114;UBERON:0001049,1.73e-23,56;UBERON:0005068,1.73e-23,56;UBERON:0006241,1.73e-23,56;UBERON:0007135,1.73e-23,56;UBERON:0003075,3.56e-22,82;UBERON:0007284,3.56e-22,82;UBERON:0000073,1.58e-21,53;UBERON:0002616,1.58e-21,53;UBERON:0002346,3.93e-20,86;UBERON:0010371,1.25e-19,104;UBERON:0000955,1.78e-18,68;UBERON:0006238,1.78e-18,68;UBERON:0001017,5.05e-18,81;UBERON:0002780,9.65e-16,41;UBERON:0001890,9.65e-16,41;UBERON:0003080,9.65e-16,41;UBERON:0006240,9.65e-16,41;UBERON:0003056,6.83e-15,61;UBERON:0001893,9.27e-15,34;UBERON:0003528,9.72e-15,34;UBERON:0002020,9.72e-15,34;UBERON:0001016,1.06e-13,89;UBERON:0000119,1.22e-13,309;UBERON:0002791,1.58e-13,32;UBERON:0000483,1.60e-13,306;UBERON:0001869,1.81e-13,32;UBERON:0000025,4.86e-13,192;UBERON:0010314,6.62e-13,132;UBERON:0004111,8.18e-13,240;UBERON:0002619,3.78e-12,22;UBERON:0000923,1.64e-11,560;UBERON:0010316,1.64e-11,560;UBERON:0005291,1.64e-11,560;UBERON:0006598,1.64e-11,560;UBERON:0010317,1.64e-11,560;UBERON:0002532,1.64e-11,560;UBERON:0002050,1.70e-11,564;UBERON:0004121,4.00e-11,171;UBERON:0000924,4.00e-11,171;UBERON:0006601,4.00e-11,171;UBERON:0001950,4.82e-11,20;UBERON:0005423,9.86e-11,581;UBERON:0000956,1.27e-09,25;UBERON:0000203,1.27e-09,25;UBERON:0000922,3.52e-09,592;UBERON:0003076,3.85e-09,15;UBERON:0003057,3.85e-09,15;UBERON:0000479,2.78e-08,773;UBERON:0004732,7.40e-08,13;UBERON:0004733,3.41e-07,12;UBERON:0002028,3.41e-07,12;UBERON:0007277,3.41e-07,12;UBERON:0000125,6.49e-07,9;UBERON:0002308,6.49e-07,9;UBERON:0002420,8.88e-07,9;UBERON:0007245,8.88e-07,9;UBERON:0010009,8.88e-07,9;UBERON:0010011,8.88e-07,9;UBERON:0000454,8.88e-07,9 | |||
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| |||
|short_description=p1@SIRT2 | |||
}} |
Latest revision as of 20:51, 17 September 2015
Short description: | p1@SIRT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SIRT2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000423526, ENST00000437828, ENST00000451193, ENST00000481381, ENST00000491960_5end |
EntrezGene: | SIRT2 |
HGNC: | 10886 |
UniProt: | F8WDM4C9J3U7F8WF57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.19e-08 | 36 |