FFCP PHASE1:Hg19::chr19:45409845..45409890,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=348 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=613 | |||
|TSSclassifier=strong | |||
|UniProt=E7ERP7 | |||
|association_with_transcript=228bp_to_ENST00000425718_5end | |||
|cluster_id=chr19:45409845..45409890,+ | |||
|coexpression_cluster_id=C401 | |||
|description=CAGE_peak_2_at_APOE_5end | |||
|id=chr19:45409845..45409890,+ | |||
|ontology_enrichment_celltype=CL:0000325!3.36e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000235;3.20e-12;6!CL:0000182;7.27e-09;12!CL:0002521;6.60e-07;3!CL:0002619;7.26e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.00e-12,6;CL:0000182,4.43e-09,12;CL:0002521,7.19e-07,3;CL:0002619,7.33e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.62e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.44e-24!115;UBERON:0005743!1.13e-23!86;UBERON:0001017!4.75e-22!82;UBERON:0002616!2.51e-21!59;UBERON:0000073!1.09e-20!94;UBERON:0001016!1.09e-20!94;UBERON:0001049!2.71e-20!57;UBERON:0005068!2.71e-20!57;UBERON:0006241!2.71e-20!57;UBERON:0007135!2.71e-20!57;UBERON:0000955!1.09e-19!69;UBERON:0006238!1.09e-19!69;UBERON:0003075!2.86e-17!86;UBERON:0007284!2.86e-17!86;UBERON:0002346!1.75e-16!90;UBERON:0003080!1.30e-14!42;UBERON:0002780!3.26e-14!41;UBERON:0001890!3.26e-14!41;UBERON:0006240!3.26e-14!41;UBERON:0000153!3.73e-14!129;UBERON:0007811!3.73e-14!129;UBERON:0000033!7.79e-14!123;UBERON:0002020!1.17e-13!34;UBERON:0003528!1.17e-13!34;UBERON:0004121!3.81e-13!169;UBERON:0001893!4.22e-13!34;UBERON:0000924!7.90e-13!173;UBERON:0006601!7.90e-13!173;UBERON:0002791!9.02e-13!33;UBERON:0003056!1.84e-12!61;UBERON:0001869!6.94e-12!32;UBERON:0000475!4.59e-10!365;UBERON:0001950!1.96e-08!20;UBERON:0000483!2.17e-08!309;UBERON:0002619!2.33e-08!22;UBERON:0002107!2.36e-08!19;UBERON:0006925!2.36e-08!19;UBERON:0008836!2.36e-08!19;UBERON:0000481!4.54e-08!347;UBERON:0002365!4.68e-08!31;UBERON:0002330!4.68e-08!31;UBERON:0000956!5.42e-08!25;UBERON:0000203!5.42e-08!25;UBERON:0000119!5.50e-08!312;UBERON:0002308!6.02e-08!9;UBERON:0000125!6.02e-08!9;UBERON:0005057!6.22e-08!26;UBERON:0000922!6.84e-08!612;UBERON:0000062!1.21e-07!511;UBERON:0002420!1.31e-07!9;UBERON:0007245!1.31e-07!9;UBERON:0010009!1.31e-07!9;UBERON:0010011!1.31e-07!9;UBERON:0000454!1.31e-07!9;UBERON:0000468!1.54e-07!659;UBERON:0009497!1.57e-07!25;UBERON:0000015!1.57e-07!25;UBERON:0002423!1.57e-07!25;UBERON:0006235!1.57e-07!25;UBERON:0004161!1.57e-07!25;UBERON:0009854!1.66e-07!23;UBERON:0008835!4.97e-07!22;UBERON:0003894!4.97e-07!22;UBERON:0003076!5.69e-07!15;UBERON:0003057!5.69e-07!15;UBERON:0000025!6.85e-07!194;UBERON:0009856!6.94e-07!26;UBERON:0002298!8.08e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;4.02e-12;9!UBERON:0002308;4.02e-12;9!UBERON:0002107;1.62e-11;19!UBERON:0006925;1.62e-11;19!UBERON:0002420;2.75e-11;9!UBERON:0007245;2.75e-11;9!UBERON:0010009;2.75e-11;9!UBERON:0010011;2.75e-11;9!UBERON:0000454;2.75e-11;9!UBERON:0002365;7.72e-11;31!UBERON:0002330;7.72e-11;31!UBERON:0002298;1.05e-09;6!UBERON:0009663;6.64e-09;7!UBERON:0000073;2.54e-08;53!UBERON:0002616;2.54e-08;53!UBERON:0002423;5.09e-08;25!UBERON:0004733;1.48e-07;12!UBERON:0002028;1.48e-07;12!UBERON:0002190;6.60e-07;3!UBERON:0004732;7.30e-07;13!UBERON:0001017;7.94e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.39e-16,81;UBERON:0011216,2.49e-15,223;UBERON:0001016,1.42e-14,89;UBERON:0001049,4.17e-14,56;UBERON:0005068,4.17e-14,56;UBERON:0006241,4.17e-14,56;UBERON:0007135,4.17e-14,56;UBERON:0000955,3.21e-13,68;UBERON:0006238,3.21e-13,68;UBERON:0007023,1.14e-12,114;UBERON:0000073,1.37e-12,53;UBERON:0002616,1.37e-12,53;UBERON:0000125,3.59e-12,9;UBERON:0002308,3.59e-12,9;UBERON:0002107,1.14e-11,19;UBERON:0006925,1.14e-11,19;UBERON:0008836,1.14e-11,19;UBERON:0002420,1.51e-11,9;UBERON:0007245,1.51e-11,9;UBERON:0010009,1.51e-11,9;UBERON:0010011,1.51e-11,9;UBERON:0000454,1.51e-11,9;UBERON:0002365,1.02e-10,31;UBERON:0002330,1.02e-10,31;UBERON:0009854,1.50e-10,23;UBERON:0009856,2.41e-10,26;UBERON:0002298,3.40e-10,6;UBERON:0008835,1.19e-09,22;UBERON:0003894,1.19e-09,22;UBERON:0003076,1.41e-09,15;UBERON:0003057,1.41e-09,15;UBERON:0007499,1.77e-09,25;UBERON:0009663,6.08e-09,7;UBERON:0002346,2.53e-08,86;UBERON:0003075,3.13e-08,82;UBERON:0007284,3.13e-08,82;UBERON:0009497,3.97e-08,25;UBERON:0000015,3.97e-08,25;UBERON:0002423,3.97e-08,25;UBERON:0006235,3.97e-08,25;UBERON:0004161,3.97e-08,25;UBERON:0004733,7.38e-08,12;UBERON:0002028,7.38e-08,12;UBERON:0007277,7.38e-08,12;UBERON:0003528,2.35e-07,34;UBERON:0002020,2.35e-07,34;UBERON:0002780,2.70e-07,41;UBERON:0001890,2.70e-07,41;UBERON:0003080,2.70e-07,41;UBERON:0006240,2.70e-07,41;UBERON:0004732,3.87e-07,13;UBERON:0002190,7.19e-07,3 | |||
|phase1_expression=0.363356758541113,4.92431204949261,0.281908808191942,0,2.68176656656373,0,7.59899634504932,3.15859936713415,28.2080478455826,0,0,0.218441372130172,0.263766978228454,0.618831764800233,0.331397375727916,0,0,0,0,0.369363174230364,0.204000691244253,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,8.50878802111712,5.18229865630367,4.63636021741536,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.1420598941885,0.670700859703636,0.511450247374121,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,1.30979075497713,0,0.370784442784429,0.97364218096405,0.174129737299267,3.72282289452822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0,2.17847724779836,0.134710672069688,0,1.51357427644931,2.88087962239999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0.272746120590835,0.286804595389004,0.731842236777572,1.32529768321485,1.51052125730374,0.829288440122964,2.52320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,50.7020139287323,35.3817798003945,36.6289742142471,0,1.10689594688802,0.343135620597051,0.548751427043128,0,0.100528972411631,0.462942225792648,0,0,0,0.463721619900307,0,0.288732895522148,0,0,0,0,7.87894419479671,3.7440682422278,6.68840230299277,0,0.503946384596579,0.141775097242386,0.179117045405697,0,0,0.492663237895943,0.088048434013226,0,0,0,0.571481048629521,0.763976851116555,0,6.84289784090821,0.822619941626588,0.300343057843917,1.14330573052231,0,0,0,0,10.7296933755565,0,0,0,0,0,0,1.14382394926518,8.13932408087165,0.823240336780769,0,0.355391948742546,0,0,0,0,19.4598049025905,6.52934218861764,12.6500363689819,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,1.71768088406796,3.50119364741774,0.542530047399471,0,0,0,0,0,0,2.0694614258501,0,0,0,2.34961388955289,2.40200396667599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81289174387433,1.00253235151642,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0,0.512900250232778,0.984043937099117,0.325378394664303,8.65544497840867,0,0,0.574265537996172,0,0,0.096670718292122,0.616194468458578,0.307007349452259,0,0.322260734604821,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,1.48863347743867,0.632758849437452,0.953150969619124,0.255897791311334,1.28381696410176,0,0,0.179872457583315,0.54907405947211,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,1.73632660280006,3.27947376023316,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,8.66122967146368,0.43050537267123,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,1.1750647824022,0,0.490080431962063,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,17.2322358526797,1.08182271390393,0,4.22961015263549,0,1.61158997199083,0.121360521749513,0.111443384277478,0,0.23874448473769,0.296964680832639,0,1.9882952955326,1.54736358051564,0,0,0.844501632511974,0.597743964753209,1.10513566212459,0,0.409074730008619,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,3.87733098438087,1.29875337426592,0,0,0,0.724999575434793,0,1.27126825146383,0,0,0,0.347249989866585,0.885741385813839,2.77371808838438,0,1.10579259931225,1.77328571372128,2.85201016300164,0,0,0,0.113942055847001,0,0.269272933229316,0.977826347298073,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,1.82832850090172,0,0,0.335643173951685,0,0.158936578980379,0,0.163232808159148,0.565412285735763,0.216388639742091,0,0.353830258013357,0,0,0,0,1.34802265961354,0,5.15381780595746,0.182454789215666,0,0,0.394584402849391,1.20990716048664,0.61214552326098,0.505492637027904,0,0.103688191397247,0,0,0,0,2.56148591426813,0,0.520679215005393,0,0,0.52418000472609,0.171986032471617,0,0,0,0.0969890164884194,0,1.35588444468319,0,0,0.823040347426423,0.195551382734803,0.160317640503067,0.426905989478705,0,0,0.343609788497747,3.26030495937733,0,0,0.235694034616795,0,0,0,0,3.00210144354895,3.01191833562385,0,0,0,0.837847203816763,0,0,0.599037001496973,0.429226048136571,0.446342914883745,0.0671834724867263,0,3.49487848582361,1.6544468284517,1.89556474276683,2.49393112260484,0.295282444544246,0,0,2.04305109167363,2.25054407851027,1.2378549293751,2.07720169014593,0,0,0.91124334987037,0,3.23103399926713,0.996637174564964,0,0.179287339332845,0,0,0,0,0,0,0,0,0.492555124496034,0,0.339936274560377,12.1638353952808,17.2258955585888,3.49063982176186,4.76037366273684,0,0,1.06787412567695,0,2.07119527673598,1.9846640872478,0.790446527591777,0,0,0.544017803369474,0.5013797880454,2.45076461410769,0.983617892129413,0.314108192500469,0,0.976210119215705,1.1267183763585,1.72022758707021,1.99672292766334,1.80079568530012,0.415045904808692,0,1.06154382279153,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0.1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| |||
|short_description=p2@APOE | |||
}} |
Latest revision as of 14:39, 18 September 2015
Short description: | p2@APOE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_APOE_5end |
Coexpression cluster: | C401_Cardiac_pineal_occipital_globus_Hepatocyte_Osteoblast_hippocampus |
Association with transcript: | 228bp_to_ENST00000425718_5end |
EntrezGene: | APOE |
HGNC: | 613 |
UniProt: | E7ERP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.00e-12 | 6 |
hepatocyte | 4.43e-09 | 12 |
subcutaneous fat cell | 7.19e-07 | 3 |
adult endothelial progenitor cell | 7.33e-07 | 3 |