FFCP PHASE1:Hg19::chr19:9964687..9964698,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:9964687..9964698,- | |||
|coexpression_cluster_id=C1245 | |||
|description=CAGE_peak_at_chr19:9964687..9964698,- | |||
|id=chr19:9964687..9964698,- | |||
|ontology_enrichment_celltype=CL:0000047!4.71e-10!8;CL:0000540!8.50e-08!6;CL:0000031!8.50e-08!6;CL:0000404!8.50e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.71e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.29e-11,8 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.74e-08;3!UBERON:0003099;2.44e-07;1!UBERON:0003852;2.44e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1192;7.91e-09;3!DOID:3369;5.60e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,7.20e-09,3;DOID:3369,4.57e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.52e-36!82;UBERON:0005743!4.54e-35!86;UBERON:0001049!1.44e-32!57;UBERON:0005068!1.44e-32!57;UBERON:0006241!1.44e-32!57;UBERON:0007135!1.44e-32!57;UBERON:0000073!2.30e-32!94;UBERON:0001016!2.30e-32!94;UBERON:0002616!3.91e-29!59;UBERON:0002346!7.93e-28!90;UBERON:0000955!2.69e-26!69;UBERON:0006238!2.69e-26!69;UBERON:0003075!1.50e-24!86;UBERON:0007284!1.50e-24!86;UBERON:0003080!1.30e-23!42;UBERON:0002780!1.07e-22!41;UBERON:0001890!1.07e-22!41;UBERON:0006240!1.07e-22!41;UBERON:0000924!4.74e-21!173;UBERON:0006601!4.74e-21!173;UBERON:0007023!5.66e-20!115;UBERON:0002020!5.33e-19!34;UBERON:0003528!5.33e-19!34;UBERON:0004121!1.35e-18!169;UBERON:0001893!2.92e-18!34;UBERON:0002791!7.48e-18!33;UBERON:0001869!4.19e-17!32;UBERON:0003056!1.49e-15!61;UBERON:0000956!2.06e-15!25;UBERON:0000203!2.06e-15!25;UBERON:0000153!4.56e-15!129;UBERON:0007811!4.56e-15!129;UBERON:0002619!9.02e-15!22;UBERON:0000033!1.68e-14!123;UBERON:0001950!2.49e-13!20;UBERON:0003076!5.14e-10!15;UBERON:0003057!5.14e-10!15;UBERON:0001871!3.76e-08!7;UBERON:0004733!8.85e-08!12;UBERON:0002028!8.85e-08!12;UBERON:0007277!8.85e-08!12;UBERON:0002298!8.95e-08!8;UBERON:0004732!5.57e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002050;5.82e-11;5!UBERON:0005423;5.82e-11;5!UBERON:0000922;2.40e-09;49!UBERON:0005705;2.44e-07;1!UBERON:0008193;2.44e-07;1!UBERON:0010912;2.44e-07;1!UBERON:0002514;2.44e-07;1!UBERON:0003457;2.44e-07;1!UBERON:0008907;2.44e-07;1!UBERON:0008001;2.44e-07;1!UBERON:0007213;2.44e-07;1!UBERON:0009891;2.44e-07;1!UBERON:0007914;2.44e-07;1!UBERON:0007375;2.44e-07;1!UBERON:0003323;2.44e-07;1!UBERON:0010258;2.44e-07;1!UBERON:0005253;2.44e-07;1!UBERON:0007842;2.44e-07;1!UBERON:0002397;2.44e-07;1!UBERON:0003113;2.44e-07;1!UBERON:0003277;2.44e-07;1!UBERON:0001709;2.44e-07;1!UBERON:0002244;2.44e-07;1!UBERON:0005620;2.44e-07;1!UBERON:0010364;2.44e-07;1!UBERON:0004288;2.44e-07;1!UBERON:0005795;5.60e-07;1!UBERON:0007029;5.60e-07;1!UBERON:0001950;7.71e-07;20!UBERON:0002346;9.74e-07;4!UBERON:0000923;9.74e-07;4!UBERON:0010316;9.74e-07;4!UBERON:0005291;9.74e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.18e-13,89;UBERON:0001017,1.52e-12,81;UBERON:0004121,4.42e-09,171;UBERON:0000924,4.42e-09,171;UBERON:0006601,4.42e-09,171;UBERON:0005705,2.23e-07,1;UBERON:0008193,2.23e-07,1;UBERON:0010912,2.23e-07,1;UBERON:0002514,2.23e-07,1;UBERON:0003457,2.23e-07,1;UBERON:0008907,2.23e-07,1;UBERON:0008001,2.23e-07,1;UBERON:0007213,2.23e-07,1;UBERON:0009891,2.23e-07,1;UBERON:0007914,2.23e-07,1;UBERON:0009292,2.23e-07,1;UBERON:0003099,2.23e-07,1;UBERON:0007375,2.23e-07,1;UBERON:0003323,2.23e-07,1;UBERON:0010258,2.23e-07,1;UBERON:0007842,2.23e-07,1;UBERON:0009494,2.23e-07,1;UBERON:0010042,2.23e-07,1;UBERON:0010045,2.23e-07,1;UBERON:0010259,2.23e-07,1;UBERON:0010359,2.23e-07,1;UBERON:0009526,2.23e-07,1;UBERON:0002397,2.23e-07,1;UBERON:0003113,2.23e-07,1;UBERON:0003277,2.23e-07,1;UBERON:0001709,2.23e-07,1;UBERON:0004066,2.23e-07,1;UBERON:0002244,2.23e-07,1;UBERON:0005620,2.23e-07,1;UBERON:0004362,2.23e-07,1;UBERON:0010364,2.23e-07,1;UBERON:0010046,2.23e-07,1;UBERON:0005868,2.23e-07,1;UBERON:0007238,2.23e-07,1;UBERON:0004288,2.23e-07,1;UBERON:0004068,2.23e-07,1;UBERON:0010334,2.23e-07,1;UBERON:0003852,2.23e-07,1;UBERON:0010253,2.23e-07,1;UBERON:0002346,2.58e-07,86;UBERON:0000073,2.65e-07,53;UBERON:0002616,2.65e-07,53;UBERON:0007029,3.01e-07,1;UBERON:0001049,7.66e-07,56;UBERON:0005068,7.66e-07,56;UBERON:0006241,7.66e-07,56;UBERON:0007135,7.66e-07,56;UBERON:0001950,8.03e-07,20 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0,1.0007329835313,0,0,0,1.26343974685366,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626909442956176,0.286235987131057,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,1.00267582127178,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0,0,0,0,0.49333509683432,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0.179389635688862,0.213557388818567,0.635795703478686,0,0,0,0,0,0.0974370051611986,0,0.276149695926898,0,0,0.10075209822764,0,0,0,0,0.609868530647977,0.265059536642971,0.69716365721711,0.310983165046111,0.504641701751257,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0,0,0.122988438543114,0,0.219500570817251,0,0.201057944823262,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0,1.27047312111232,1.30139853857622,0.773288812777695,0.837581326671744,2.55175500661265,0,0,0,0.12269149171914,0,0,0.831883446123229,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,1.02943027143257,0,0,0,0,0,0,0.744323423456331,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.640986253728404,0.082509499920588,0,0,0,0.676695028044854,0,0,0,0,0,0,0.801288320820636,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,6.73735898684351,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.728163130497081,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0.211125408127993,0.19924798825107,0.552567831062295,0,0,0,0.933118762985422,0,0,0,0,0,0,1.93866549219044,0.463840490809256,0,0,0.0874599999961957,0.724999575434793,0,0.508507300585533,0,0,0,0,0,0,1.52581736317083,0.110579259931225,1.47773809476774,1.31631238292384,0,0.278847488557207,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0.937057782901357,0,0,0,0,1.20990716048664,3.36680037793539,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0.0979923974143777,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0.253243183823515,0.195551382734803,0,0.213452994739353,0,0,0.687219576995494,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0.803765742325096,0.550157746388935,1.24632101408756,2.249738915515,0,0.182248669974074,0,0,0,0,0,0.191915197319445,0.714695326373367,0,0.25426853765475,0,0,0,0,0,0,0,0.293104467356165,0,3.23207390903876,0.26446520348538,0,0,0,0,0,0.992332043623902,0,0,0,0,1.5041393641362,0,0.983617892129413,0,0,0.366078794705889,0.1251909307065,0.573409195690071,0.332787154610557,0.124192805882767,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0.192619830407303,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0.690860683462397,0,0.414775308455192,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,1.01839517972415,2.12574920101683,0.247871528518004,4.46915934378595,0,0,0,2.82140754952547,0,0.321146125482298,0,0.319267718114302,1.43581454968528,3.02486035466062,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0.994581110581374,0.150420656698515,0.40341013740704,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.380494861163441,4.92277328116398,0,0,0.703484977438482,0.127762427639595,1.60710550763486,0.672567444437648,0,0.227662191351298,0,0,0,0.339848664884159,0.526182188502793,0.118193840883968,0,0.078493092850514,0.628462359664008,0,0.913158720509496,0,0,0.142953088353313,0.632054446930906,0,0.173858272302579,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0.102662806856247,1.1598144313382,1.94284397223656,0,0.397901550322736,0.118920090777569,0,0.109940516745429,0,0,0,0,0,0.471353094203252,0.196308467114945,0.594092800654172,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0.157771562193185,0.271965960763659,4.79985759374415,0,0,0,0,0,0,0,0.305966489225945,0,0,0,0.227336094654718,0.267964130156178,0.829169439458779,0.310298987585686,0,0.714193294391221,0.0645889098360061,0.186224142887574,0,0.0636471582781649,0.808468755832877,0,0.342233301085281,0.0673520530145875,0,0,0,0,1.9307228228694,0,0,0.122241444182866,1.22068853494722,0,0.402547587182052,0 | |||
|short_description=p@chr19:9964687..9964698,- | |||
}} |
Latest revision as of 18:50, 27 July 2015
Short description: | p@chr19:9964687..9964698, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:9964687..9964698, - |
Coexpression cluster: | C1245_normal_Neurons_parietal_temporal_neuroectodermal_occipital_basal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.29e-11 | 8 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 7.20e-09 | 3 |
peripheral primitive neuroectodermal tumor | 4.57e-07 | 1 |