FFCP PHASE1:Hg19::chr1:207103233..207103243,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5284 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8968 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=345bp_to_AK310199_5end | |||
|cluster_id=chr1:207103233..207103243,- | |||
|coexpression_cluster_id=C435 | |||
|description=CAGE_peak_19_at_PIGR_5end | |||
|id=chr1:207103233..207103243,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;6.62e-41;1!UBERON:0008801;2.21e-40;1!UBERON:0006595;5.82e-08;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!1.20e-22!2;UBERON:0001155!3.04e-19!9;UBERON:0000059!8.50e-16!11;UBERON:0007023!1.35e-13!115;UBERON:0001736!2.63e-12!1;UBERON:0006298!2.63e-12!1;UBERON:0001831!4.06e-12!1;UBERON:0001567!4.06e-12!1;UBERON:0008801!4.06e-12!1;UBERON:0001154!8.64e-12!1;UBERON:0001153!8.64e-12!1;UBERON:0005409!2.57e-10!35;UBERON:0000160!1.80e-09!27;UBERON:0004921!2.74e-08!129;UBERON:0004185!2.74e-08!129;UBERON:0001044!3.64e-08!6;UBERON:0003293!3.64e-08!6;UBERON:0003294!3.64e-08!6;UBERON:0010047!3.64e-08!6;UBERON:0000167!3.64e-08!6;UBERON:0001007!5.21e-08!155;UBERON:0001555!5.21e-08!155;UBERON:0007026!5.21e-08!155;UBERON:0004119!3.37e-07!169;UBERON:0000925!3.37e-07!169;UBERON:0006595!3.37e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;2.34e-79;2!UBERON:0001736;6.62e-41;1!UBERON:0001831;2.21e-40;1!UBERON:0001567;2.21e-40;1!UBERON:0001044;2.38e-27;6!UBERON:0003293;2.38e-27;6!UBERON:0003294;2.38e-27;6!UBERON:0010047;2.38e-27;6!UBERON:0003408;2.38e-27;6!UBERON:0000167;2.38e-27;6!UBERON:0004921;1.14e-26;33!UBERON:0004089;5.69e-21;2!UBERON:0000160;1.57e-20;17!UBERON:0001155;1.35e-18;9!UBERON:0005409;2.85e-16;22!UBERON:0000059;2.02e-15;11!UBERON:0001555;1.67e-13;54!UBERON:0001041;2.24e-12;14!UBERON:0000161;2.17e-09;19!UBERON:0000166;2.17e-09;19!UBERON:0001007;2.48e-09;81!UBERON:0002108;3.22e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,3.49e-79,2;UBERON:0001736,6.62e-41,1;UBERON:0006298,6.62e-41,1;UBERON:0001831,3.30e-40,1;UBERON:0001567,3.30e-40,1;UBERON:0008801,3.30e-40,1;UBERON:0001044,2.72e-27,6;UBERON:0003293,2.72e-27,6;UBERON:0003294,2.72e-27,6;UBERON:0010047,2.72e-27,6;UBERON:0000167,2.72e-27,6;UBERON:0004089,6.96e-21,2;UBERON:0000160,1.47e-20,17;UBERON:0001155,1.24e-18,9;UBERON:0003408,7.51e-17,10;UBERON:0000059,1.88e-15,11;UBERON:0005409,1.62e-14,25;UBERON:0007023,2.58e-09,114;UBERON:0002108,3.22e-09,4;UBERON:0004921,6.01e-09,118;UBERON:0000166,3.15e-08,22;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,2.74218449960351,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85217979459067,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0.730336388246517,3.21110498383179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0,0,0,0,0,0,0,0,0.573777643141411,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p19@PIGR | |||
}} |
Latest revision as of 06:33, 20 September 2015
Short description: | p19@PIGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_PIGR_5end |
Coexpression cluster: | C435_submaxillary_salivary_parotid_small_colon_gall_trachea |
Association with transcript: | 345bp_to_AK310199_5end |
EntrezGene: | PIGR |
HGNC: | 8968 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 3.49e-79 | 2 |
submandibular gland | 6.62e-41 | 1 |
submandibular gland primordium | 6.62e-41 | 1 |
parotid gland | 3.30e-40 | 1 |
cheek | 3.30e-40 | 1 |
parotid gland primordium | 3.30e-40 | 1 |
saliva-secreting gland | 2.72e-27 | 6 |
gland of oral region | 2.72e-27 | 6 |
gland of foregut | 2.72e-27 | 6 |
oral gland | 2.72e-27 | 6 |
oral cavity | 2.72e-27 | 6 |
midface | 6.96e-21 | 2 |
intestine | 1.47e-20 | 17 |
colon | 1.24e-18 | 9 |
gland of gut | 7.51e-17 | 10 |
large intestine | 1.88e-15 | 11 |
gastrointestinal system | 1.62e-14 | 25 |
adult organism | 2.58e-09 | 114 |
small intestine | 3.22e-09 | 4 |
subdivision of digestive tract | 6.01e-09 | 118 |
oral opening | 3.15e-08 | 22 |
digestive system | 2.16e-07 | 145 |
digestive tract | 2.16e-07 | 145 |
primitive gut | 2.16e-07 | 145 |
endoderm-derived structure | 9.48e-07 | 160 |
endoderm | 9.48e-07 | 160 |
presumptive endoderm | 9.48e-07 | 160 |