FFCP PHASE1:Hg19::chr20:44519948..44519986,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5476 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9251 | |||
|TSSclassifier=strong | |||
|UniProt=P10619,Q5JZH0 | |||
|association_with_transcript=0bp_to_ENST00000191018,ENST00000419493_5end | |||
|cluster_id=chr20:44519948..44519986,+ | |||
|coexpression_cluster_id=C1750 | |||
|description=CAGE_peak_1_at_CTSA_5end | |||
|id=chr20:44519948..44519986,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.98e-13!180;CL:0002371!1.37e-12!591;CL:0000144!1.22e-11!625;CL:0000222!4.47e-11!119;CL:0000548!1.38e-10!679;CL:0000004!1.38e-10!679;CL:0000255!1.38e-10!679;CL:0000057!5.30e-10!75;CL:0000012!5.39e-10!682;CL:0000048!2.35e-09!430;CL:0002194!4.75e-09!63;CL:0000576!4.75e-09!63;CL:0000040!4.75e-09!63;CL:0000559!4.75e-09!63;CL:0000213!4.90e-08!57;CL:0000215!4.90e-08!57;CL:0000723!5.13e-08!436;CL:0002009!9.09e-08!65;CL:0002320!1.01e-07!365;CL:0002078!3.48e-07!44;CL:0000063!8.89e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000473;8.93e-07;39!CL:0000234;8.93e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.89e-11,121;CL:0000057,3.03e-10,76;CL:0000048,2.41e-09,427;CL:0002194,3.69e-09,59;CL:0000576,3.69e-09,59;CL:0000040,3.69e-09,59;CL:0000559,3.69e-09,59;CL:0000213,3.02e-08,58;CL:0000215,3.02e-08,58;CL:0000723,5.27e-08,433;CL:0002009,8.01e-08,61;CL:0002320,1.34e-07,361;CL:0000473,2.03e-07,48;CL:0000234,2.03e-07,48;CL:0002078,2.13e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.00e-16!448;UBERON:0004120!1.00e-16!448;UBERON:0006603!1.00e-16!448;UBERON:0003081!2.34e-14!216;UBERON:0000468!2.81e-10!659;UBERON:0002204!9.87e-10!167;UBERON:0002405!1.38e-09!115;UBERON:0000480!3.25e-09!626;UBERON:0000467!4.59e-09!625;UBERON:0001009!4.18e-08!113;UBERON:0003914!4.69e-08!118;UBERON:0004535!5.70e-08!110;UBERON:0002384!1.74e-07!375;UBERON:0002193!3.40e-07!112;UBERON:0001474!9.84e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.76e-17,315;UBERON:0004120,1.76e-17,315;UBERON:0006603,1.76e-17,315;UBERON:0003081,8.63e-14,203;UBERON:0002204,1.26e-10,167;UBERON:0003914,6.59e-08,117;UBERON:0001009,6.66e-08,112;UBERON:0004535,9.09e-08,109;UBERON:0002384,2.31e-07,371;UBERON:0001434,3.04e-07,100;UBERON:0002193,3.82e-07,108;UBERON:0002405,4.02e-07,93;UBERON:0004765,6.45e-07,90 | |||
|phase1_expression=210.746919953846,207.463407650363,225.386092149458,238.17445008045,258.343512578972,213.72293840459,144.380930555937,121.290215697952,170.293029586295,81.8294008550024,143.049239434348,103.104327645441,115.266169485834,162.010156024701,171.001045875605,137.826655022614,159.11135539833,166.510700608321,171.264412375468,144.421001124072,159.528540553006,156.100451296088,59.2508493361287,47.6322999253637,41.0524431475005,19.7910720887194,19.2936385207373,19.3628522031651,96.3742478279815,51.0493099469293,127.413669489131,27.5826367343678,32.530239228051,24.403764671008,14.4863665085164,24.4531079878365,39.3424588708695,110.799081706375,113.70870171557,101.344076624303,353.562533824841,474.180327051786,286.166455641581,135.656556781334,89.178722710559,83.6915011097966,169.67319694115,93.3351105809544,98.1769195737478,226.701605149855,113.735353698921,118.950561633958,176.165042856412,91.6588250689033,117.821043337077,165.46501645795,91.6964664194362,78.6532195557796,179.365160929349,85.0461921751648,93.34322036666,174.82118909896,109.306084376654,118.064255897556,178.478681756579,93.6185620740381,103.388493333265,186.175260955247,113.683276215604,116.847598451353,173.749657255777,90.2280208169533,77.8497473104576,96.1211552719335,89.2938059853183,96.4429769338529,154.339539195284,173.304134339098,127.616115837482,61.8477653918509,63.0565866721116,61.1924915111524,26.3994366691984,20.753267227961,30.2433146313609,32.4314969150545,22.8225712610527,33.9103939573145,29.7470192753188,30.5297201451317,13.0918982895173,35.8214685516273,12.6150165281326,27.7559790015954,28.5859367120583,63.7389485155686,20.4578160918386,23.5806457649499,25.7001873749387,49.1528296448594,26.7256258639544,27.4599727326145,38.9653456815823,58.379079407831,61.8672405697158,66.0171005859191,57.1396152544183,77.1109744748564,79.3362020115257,44.5626721475962,45.597752934665,42.6010536030527,19.8703994637161,20.0655621067285,22.9978152370949,40.5647446857287,26.0589935649306,30.2392152024714,30.8684024263793,35.0421955756506,41.6693410468108,41.8198899557285,36.7403290549766,34.3004117893841,36.2299107001803,39.7785783433948,33.6662478737629,36.4908205236766,17.6510529217115,23.751202236779,287.692102250475,152.919796012429,148.192709176652,179.635258735129,134.358560050418,204.088745215801,108.15888879895,159.129602588962,50.103453096956,60.7538549047425,66.3152631983102,115.065117824741,65.5731518926576,45.2357020197004,226.858628164624,236.642312989704,184.412691239666,23.1335905576182,39.4676488438288,21.5445350771148,64.5977823941791,107.529324388266,104.836431485493,120.975899571738,174.092266027111,111.973043069607,73.1482382878837,171.847144847604,202.075237206051,182.088013343981,158.311921623895,65.3834010917921,168.890943823333,100.739684014768,188.76307385645,74.9224720303429,71.6248698677482,62.7245946292105,73.591985983624,78.7890497441547,70.166267925346,35.5807127077371,77.5560528296651,61.4892613520973,151.079473315377,122.451704779649,203.910138452357,709.633799732565,143.640694790335,125.031104831734,75.7917869680905,237.294181577308,123.550781053707,83.6553273552763,87.288656262587,149.238423657902,108.89724972672,92.3226441425159,144.217955495608,75.3022804438673,127.180827149583,41.1020745253177,39.9826172589285,42.416143624079,99.6272355723879,55.5211114249191,116.758132728615,277.992668604001,204.489750513367,232.091147294197,263.014239904743,51.1741786420361,48.4208671904501,62.8935542149095,90.8683675223334,125.047020686,253.301367316522,89.4979925132566,160.374334305843,199.889715934179,154.498355945321,285.686723472351,138.6056518257,178.287253711575,163.782833571799,246.750997736731,129.883527879878,143.129949996413,165.781867454781,256.693938228273,320.573662042503,99.7445772453639,83.2542508244494,63.0030381312348,54.5492241181669,51.9116317654097,30.4934265323988,28.6264299574408,32.5343040034652,30.0617059544574,30.7831438068267,27.0083245716114,87.6117381046969,169.815607682922,31.7710319110705,167.636822019544,261.32037236439,61.1646156205993,60.1847343578823,51.5763603950652,60.3308030846195,60.5704854576889,59.0803841586631,74.8313760288912,63.1833117703614,70.4087297211894,232.518968206764,196.338483324824,147.343496056641,152.889059840964,76.0530208930985,82.5574862009206,121.111930869688,28.6951014619523,152.505663793461,109.631830780758,34.7908404745343,40.464631172743,28.9523440545497,33.3318402570707,76.239143442616,119.592500307152,82.2688649544058,91.0053679054353,131.49773754412,148.119975402862,170.841654140769,152.964338396617,90.0833013673574,105.593797937669,515.085976734835,231.196213957567,269.022403742598,27.1828118561653,41.9955320497149,24.3853167256905,30.1812221508599,28.4821259743683,43.7056254248341,58.6269253096173,73.1682486649908,12.6470150479871,16.4296746895336,16.6640012122822,192.970100753902,285.345353892033,353.996690574342,210.419108607927,162.467438471251,163.987309582779,237.52176551601,83.6497889216391,129.480140443484,55.737097223922,228.940208607024,5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| |||
|short_description=p1@CTSA | |||
}} |
Latest revision as of 13:00, 16 September 2015
Short description: | p1@CTSA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CTSA_5end |
Coexpression cluster: | C1750_Monocytederived_Fibroblast_Mesenchymal_Smooth_Macrophage_CD14_Pericytes |
Association with transcript: | 0bp_to_ENST00000191018, ENST00000419493_5end |
EntrezGene: | CTSA |
HGNC: | 9251 |
UniProt: | P10619Q5JZH0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.89e-11 | 121 |
fibroblast | 3.03e-10 | 76 |
multi fate stem cell | 2.41e-09 | 427 |
monopoietic cell | 3.69e-09 | 59 |
monocyte | 3.69e-09 | 59 |
monoblast | 3.69e-09 | 59 |
promonocyte | 3.69e-09 | 59 |
lining cell | 3.02e-08 | 58 |
barrier cell | 3.02e-08 | 58 |
somatic stem cell | 5.27e-08 | 433 |
macrophage dendritic cell progenitor | 8.01e-08 | 61 |
connective tissue cell | 1.34e-07 | 361 |
defensive cell | 2.03e-07 | 48 |
phagocyte | 2.03e-07 | 48 |
meso-epithelial cell | 2.13e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.76e-17 | 315 |
mesoderm-derived structure | 1.76e-17 | 315 |
presumptive mesoderm | 1.76e-17 | 315 |
lateral plate mesoderm | 8.63e-14 | 203 |
musculoskeletal system | 1.26e-10 | 167 |
epithelial tube | 6.59e-08 | 117 |
circulatory system | 6.66e-08 | 112 |
cardiovascular system | 9.09e-08 | 109 |
connective tissue | 2.31e-07 | 371 |
skeletal system | 3.04e-07 | 100 |
hemolymphoid system | 3.82e-07 | 108 |
immune system | 4.02e-07 | 93 |
skeletal element | 6.45e-07 | 90 |