FFCP PHASE1:Hg19::chr9:124976185..124976212,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:124976185..124976212,-
|short_description=p4@LHX6
|description=CAGE_peak_4_at_LHX6_5end
|association_with_transcript=0bp_to_ENST00000464484_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26468 | |EntrezGene=26468 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21735 | |HGNC=21735 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000464484_5end | |||
|cluster_id=chr9:124976185..124976212,- | |||
|description=CAGE_peak_4_at_LHX6_5end | |||
|id=chr9:124976185..124976212,- | |||
|ontology_enrichment_celltype=CL:0000066!2.22e-24!254;CL:0000223!3.02e-12!59;CL:0002076!1.12e-10!43;CL:0000039!3.37e-07!7;CL:0000586!3.37e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.34e-11;7!CL:0000586;3.34e-11;7!CL:0000082;2.69e-07;19!CL:0002535;2.69e-07;2!CL:0002327;3.49e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.58e-11,7;CL:0000586,3.58e-11,7;CL:0000066,8.31e-11,253;CL:0002535,2.20e-07,2;CL:0000082,3.00e-07,19;CL:0002327,4.81e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!8.32e-33!106;DOID:0050687!1.71e-32!143;DOID:162!1.05e-31!235;DOID:14566!2.12e-30!239;DOID:1749!9.68e-11!14;DOID:0050686!1.45e-08!137;DOID:4362!5.63e-08!5;DOID:7!1.44e-07!39;DOID:3905!2.99e-07!9 | |||
|ontology_enrichment_disease_v019=DOID:3905;3.45e-12;9!DOID:0050615;1.33e-11;16!DOID:1325;2.26e-11;7!DOID:3904;2.26e-11;7!DOID:4362;9.48e-11;5!DOID:1749;1.74e-10;14!DOID:1036;6.15e-10;8!DOID:1324;1.56e-09;15!DOID:305;3.43e-08;106!DOID:5409;1.22e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.25e-22,235;DOID:14566,1.18e-21,239;DOID:0050687,3.62e-20,143;DOID:305,4.33e-20,106;DOID:0050686,8.04e-14,137;DOID:3905,4.15e-12,9;DOID:0050615,1.52e-11,16;DOID:1325,3.08e-11,7;DOID:3904,3.08e-11,7;DOID:4362,8.20e-11,5;DOID:1749,2.17e-10,14;DOID:1036,5.26e-10,8;DOID:1324,1.80e-09,15;DOID:5409,1.63e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.22e-07!169;UBERON:0000925!1.22e-07!169;UBERON:0006595!1.22e-07!169;UBERON:0005153!2.52e-07!37;UBERON:0005157!9.65e-07!51 | |||
|ontology_enrichment_uberon_v019=UBERON:0001264;8.32e-11;10!UBERON:0000002;5.95e-09;6!UBERON:0001560;5.95e-09;6!UBERON:0004802;2.69e-07;19!UBERON:0000115;2.69e-07;19!UBERON:0006955;2.69e-07;2!UBERON:0004801;2.69e-07;2!UBERON:0001911;3.49e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,5.60e-11,10;UBERON:0005153,2.50e-09,37;UBERON:0000002,5.28e-09,6;UBERON:0001560,5.28e-09,6;UBERON:0006955,2.20e-07,2;UBERON:0004801,2.20e-07,2;UBERON:0004802,3.00e-07,19;UBERON:0000115,3.00e-07,19;UBERON:0001911,4.81e-07,4;UBERON:0005333,4.81e-07,4;UBERON:0008425,4.81e-07,4;UBERON:0005311,4.81e-07,4;UBERON:0005157,8.28e-07,47 | |||
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| ||
|short_description=p4@LHX6 | |||
}} | }} |
Latest revision as of 22:06, 24 September 2015
Short description: | p4@LHX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LHX6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000464484_5end |
EntrezGene: | LHX6 |
HGNC: | 21735 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.58e-11 | 7 |
germ cell | 3.58e-11 | 7 |
epithelial cell | 8.31e-11 | 253 |
epithelial cell of cervix | 2.20e-07 | 2 |
epithelial cell of lung | 3.00e-07 | 19 |
mammary gland epithelial cell | 4.81e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pancreas | 5.60e-11 | 10 |
epithelial bud | 2.50e-09 | 37 |
uterine cervix | 5.28e-09 | 6 |
neck of organ | 5.28e-09 | 6 |
uterine epithelium | 2.20e-07 | 2 |
cervix epithelium | 2.20e-07 | 2 |
respiratory tract epithelium | 3.00e-07 | 19 |
lung epithelium | 3.00e-07 | 19 |
mammary gland | 4.81e-07 | 4 |
mammary bud | 4.81e-07 | 4 |
mammary ridge | 4.81e-07 | 4 |
mammary placode | 4.81e-07 | 4 |
epithelial fold | 8.28e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.25e-22 | 235 |
disease of cellular proliferation | 1.18e-21 | 239 |
cell type cancer | 3.62e-20 | 143 |
carcinoma | 4.33e-20 | 106 |
organ system cancer | 8.04e-14 | 137 |
lung carcinoma | 4.15e-12 | 9 |
respiratory system cancer | 1.52e-11 | 16 |
bronchus cancer | 3.08e-11 | 7 |
bronchogenic carcinoma | 3.08e-11 | 7 |
cervical cancer | 8.20e-11 | 5 |
squamous cell carcinoma | 2.17e-10 | 14 |
chronic leukemia | 5.26e-10 | 8 |
lung cancer | 1.80e-09 | 15 |
lung small cell carcinoma | 1.63e-07 | 4 |