FFCP PHASE1:Hg19::chr9:127703333..127703398,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:127703333..127703398,-
|short_description=p2@GOLGA1
|description=CAGE_peak_2_at_GOLGA1_5end
|association_with_transcript=0bp_to_ENST00000373555,NM_002077,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2800 | |EntrezGene=2800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4424 | |HGNC=4424 | ||
|TSSclassifier=strong | |||
|UniProt=Q92805 | |UniProt=Q92805 | ||
|association_with_transcript=0bp_to_ENST00000373555,NM_002077,uc004bpc.2_5end | |||
|cluster_id=chr9:127703333..127703398,- | |||
|description=CAGE_peak_2_at_GOLGA1_5end | |||
|id=chr9:127703333..127703398,- | |||
|ontology_enrichment_celltype=CL:0002620!1.15e-07!23;CL:0000791!5.58e-07!18;CL:0000789!5.58e-07!18;CL:0002420!5.58e-07!18;CL:0002419!5.58e-07!18;CL:0000790!5.58e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002620;9.00e-08;23!CL:0000791;4.94e-07;18!CL:0000789;4.94e-07;18!CL:0002419;4.94e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.14e-07,23;CL:0000791,5.55e-07,18;CL:0000789,5.55e-07,18;CL:0002420,5.55e-07,18;CL:0002419,5.55e-07,18;CL:0000790,5.55e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;4.94e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.86e-18!115;UBERON:0001049!6.90e-14!57;UBERON:0005068!6.90e-14!57;UBERON:0006241!6.90e-14!57;UBERON:0007135!6.90e-14!57;UBERON:0000955!1.09e-12!69;UBERON:0006238!1.09e-12!69;UBERON:0002616!1.14e-12!59;UBERON:0002780!6.52e-12!41;UBERON:0001890!6.52e-12!41;UBERON:0006240!6.52e-12!41;UBERON:0003080!1.09e-11!42;UBERON:0001017!1.70e-11!82;UBERON:0005743!6.10e-11!86;UBERON:0000073!6.74e-11!94;UBERON:0001016!6.74e-11!94;UBERON:0001893!1.03e-10!34;UBERON:0002020!1.26e-10!34;UBERON:0003528!1.26e-10!34;UBERON:0002791!2.47e-10!33;UBERON:0001869!1.28e-09!32;UBERON:0003075!1.37e-07!86;UBERON:0007284!1.37e-07!86;UBERON:0002346!3.37e-07!90;UBERON:0000956!3.82e-07!25;UBERON:0000203!3.82e-07!25;UBERON:0002619!4.69e-07!22;UBERON:0000178!5.51e-07!15;UBERON:0000179!5.51e-07!15;UBERON:0000463!5.51e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.52e-09;41!UBERON:0001890;3.52e-09;41!UBERON:0003528;5.65e-09;34!UBERON:0002020;5.65e-09;34!UBERON:0001893;8.15e-09;34!UBERON:0002791;1.32e-08;32!UBERON:0001869;2.06e-08;32!UBERON:0000073;3.48e-08;53!UBERON:0002616;3.48e-08;53!UBERON:0002619;5.31e-07;22!UBERON:0000178;5.38e-07;15!UBERON:0000179;5.38e-07;15!UBERON:0000463;5.38e-07;15!UBERON:0000956;5.98e-07;25!UBERON:0000203;5.98e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.18e-18,114;UBERON:0001049,4.29e-14,56;UBERON:0005068,4.29e-14,56;UBERON:0006241,4.29e-14,56;UBERON:0007135,4.29e-14,56;UBERON:0000073,6.89e-13,53;UBERON:0002616,6.89e-13,53;UBERON:0000955,7.94e-13,68;UBERON:0006238,7.94e-13,68;UBERON:0002780,6.46e-12,41;UBERON:0001890,6.46e-12,41;UBERON:0003080,6.46e-12,41;UBERON:0006240,6.46e-12,41;UBERON:0001017,1.42e-11,81;UBERON:0001016,1.81e-11,89;UBERON:0001893,1.02e-10,34;UBERON:0003528,1.25e-10,34;UBERON:0002020,1.25e-10,34;UBERON:0002791,8.92e-10,32;UBERON:0001869,1.27e-09,32;UBERON:0003075,6.05e-08,82;UBERON:0007284,6.05e-08,82;UBERON:0002346,1.61e-07,86;UBERON:0000956,3.80e-07,25;UBERON:0000203,3.80e-07,25;UBERON:0010371,3.91e-07,104;UBERON:0002619,4.67e-07,22;UBERON:0000178,5.48e-07,15;UBERON:0000179,5.48e-07,15;UBERON:0000463,5.48e-07,15 | |||
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| ||
|short_description=p2@GOLGA1 | |||
}} | }} |
Latest revision as of 01:25, 25 September 2015
Short description: | p2@GOLGA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GOLGA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000373555, NM_002077, uc004bpc.2_5end |
EntrezGene: | GOLGA1 |
HGNC: | 4424 |
UniProt: | Q92805 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.14e-07 | 23 |
mature alpha-beta T cell | 5.55e-07 | 18 |
alpha-beta T cell | 5.55e-07 | 18 |
immature T cell | 5.55e-07 | 18 |
mature T cell | 5.55e-07 | 18 |
immature alpha-beta T cell | 5.55e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.18e-18 | 114 |
neural tube | 4.29e-14 | 56 |
neural rod | 4.29e-14 | 56 |
future spinal cord | 4.29e-14 | 56 |
neural keel | 4.29e-14 | 56 |
regional part of nervous system | 6.89e-13 | 53 |
regional part of brain | 6.89e-13 | 53 |
brain | 7.94e-13 | 68 |
future brain | 7.94e-13 | 68 |
regional part of forebrain | 6.46e-12 | 41 |
forebrain | 6.46e-12 | 41 |
anterior neural tube | 6.46e-12 | 41 |
future forebrain | 6.46e-12 | 41 |
central nervous system | 1.42e-11 | 81 |
nervous system | 1.81e-11 | 89 |
telencephalon | 1.02e-10 | 34 |
brain grey matter | 1.25e-10 | 34 |
gray matter | 1.25e-10 | 34 |
regional part of telencephalon | 8.92e-10 | 32 |
cerebral hemisphere | 1.27e-09 | 32 |
neural plate | 6.05e-08 | 82 |
presumptive neural plate | 6.05e-08 | 82 |
neurectoderm | 1.61e-07 | 86 |
cerebral cortex | 3.80e-07 | 25 |
pallium | 3.80e-07 | 25 |
ecto-epithelium | 3.91e-07 | 104 |
regional part of cerebral cortex | 4.67e-07 | 22 |
blood | 5.48e-07 | 15 |
haemolymphatic fluid | 5.48e-07 | 15 |
organism substance | 5.48e-07 | 15 |