FFCP PHASE1:Hg19::chr22:38201945..38202027,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr22:38201945..38202027,- | |||
|coexpression_cluster_id=C4099 | |||
|description=CAGE_peak_at_chr22:38201945..38202027,- | |||
|id=chr22:38201945..38202027,- | |||
|ontology_enrichment_celltype=CL:0000066!1.36e-13!254;CL:0000133!1.28e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.55e-12,253;CL:0000133,5.56e-08,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!5.90e-22!143;DOID:305!7.25e-15!106;DOID:162!6.25e-11!235;DOID:14566!2.17e-10!239;DOID:3095!4.63e-07!22;DOID:2994!4.63e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.88e-08;22!DOID:2994;5.88e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.43e-22,143;DOID:305,1.76e-14,106;DOID:162,3.49e-12,235;DOID:14566,1.87e-11,239;DOID:3095,4.24e-08,22;DOID:2994,4.24e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.05e-11!169;UBERON:0000925!2.05e-11!169;UBERON:0006595!2.05e-11!169;UBERON:0001007!2.12e-09!155;UBERON:0001555!2.12e-09!155;UBERON:0007026!2.12e-09!155;UBERON:0000468!4.82e-09!659;UBERON:0004921!1.38e-08!129;UBERON:0004185!1.38e-08!129;UBERON:0000077!2.10e-08!130;UBERON:0000922!2.26e-07!612;UBERON:0000466!4.90e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;7.09e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.15e-09,160;UBERON:0000925,4.15e-09,160;UBERON:0006595,4.15e-09,160;UBERON:0001007,5.00e-07,145;UBERON:0001555,5.00e-07,145;UBERON:0007026,5.00e-07,145 | |||
|phase1_expression=1.63510541343501,0.642301571672949,0.986680828671798,2.00146596706261,3.5756887554183,5.23403114460221,2.53299878168311,0,1.56711376919903,1.22866968250754,3.48900583986214,3.27662058195258,1.58260186937072,0.866364470720326,0,0.672325146451775,0,2.19093027116212,0.975865597581014,2.46242116153576,2.85600967741954,4.07491137921514,4.57977579409691,4.24310717725941,6.27713197974014,0,0,0,0,0,0.309632246632152,0,0.90361775633475,0.369754010166788,0,0,1.17440175733939,0,0.401088894940283,0.434021741431704,1.34349284543955,0.647787332037959,1.03030227053675,0.726991193897824,0.377875943688809,0.485168122375632,0.464858073811369,1.23350366406548,0.619412741790207,0.575384784644301,0.768482119587302,0,0,0.645484683583826,1.35426486594342,0.376484679085209,0,0,1.22433556948361,0.320929027076094,0,1.9791078011203,0.398927315243264,0.852449501065388,0,0,0,1.25624332628372,0.521482918420201,0.217188844705117,1.21079900526674,0,0,0.422510572623884,0.425208599930087,0,0.786300418025466,1.20141514273205,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.790152254325231,0,0,0,0,0,0,0,0.445641827540694,0,0,0,0.128091319725675,0.130059347559878,0.493313713811028,0.552700035571697,0,0,0,1.04535523804977,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,3.61439152384566,0.50133791063589,1.44846518960824,0,2.43317435151318,0.756278537312543,0.665188192387692,0.87834785693126,1.83370705696798,1.45718115317017,3.33705998505986,0.324547393654683,0.348259474598534,0.132957960518865,0.715471872916026,0,0.371457501329565,0.198762407366705,0,1.04142150482278,0,0,1.10047216776027,0.417989933073621,0.775250277507987,0,0,2.41697590265488,0,4.63717909341522,0.367663080345869,1.62028389576352,1.60739510911344,4.04152870727106,4.27923625836624,0,0,1.28241220751285,0,0,1.74437620857014,2.98183171017191,0.506522046658319,0.662045904066094,0.573673241497627,1.41867352879343,2.24271040056923,0,1.72667283892012,0.311211035399766,3.3677668017422,0.490385709340376,0.756787138224657,0,8.43557154601668,0,0,0.298897361103602,5.63685593490071,1.78060238804945,2.10676210053373,0.816616685019573,2.82518929817066,1.34323515528495,2.37600571456411,2.47266929278557,0,2.15585442544872,2.35670559535693,1.50142223846357,0.277064115484183,1.75591048352335,1.83892677479412,3.30523729594513,0.567160915800105,2.33206526395521,1.49490172172997,0.423863802319124,1.50045548042201,1.03052529238439,1.03056216018252,0.18611685633159,1.0126579934476,0.487185025805993,2.01947019395292,1.47279837827679,1.13152239773168,1.06502877754984,0.302256294682921,1.86516651541536,0.773043412653187,0.545492241181669,0.573609190778008,2.92736894711029,1.72288698817931,4.64775771478074,5.28671380578389,6.05570042101508,1.09493207722749,0,3.85944562915731,0,0.464367928031979,0.721879481669586,2.48444280083672,1.18009283054671,1.92808823906786,3.08823123650703,1.30727666455444,1.66089433377768,1.48314438976181,2.15843611637881,1.53898862778556,3.69077727312324,0,1.6462960453256,0,15.2106041786197,15.725235466842,2.36315962672562,0.882926198829301,3.81264159483652,0.686271241194102,0.658501712451753,1.1240175325762,3.9206299240536,1.29623823221941,4.88712457965487,4.15973914111831,0,1.39116485970092,0.587043471179108,1.01056513432752,5.55582615091933,2.85381228351897,3.1608175918371,2.57545848628462,0.492434012174795,0.702012795417713,0.445893486866185,0,0.16798212819886,0.425325291727159,7.43335738433641,4.94077695473735,0,0,1.05658120815871,0,0.144119953416961,0,0.952468414382536,3.05590740446622,0,3.4214489204541,1.54241239054985,4.20480280981484,5.14487578735041,0.448524337381443,0,0.22001485746285,0.258543431515556,0,1.690605505112,1.59562869950922,1.04007436911366,1.02882949704857,8.5109479213967,1.0656887160644,0.57191197463259,2.17048642156577,0,0.65147236858747,0.710783897485092,0.791951872933429,0.301439377059586,0,0.699810938274399,3.64871341923571,1.50677127429638,2.10833939483032,0.958499421966331,0,1.42636905040718,0.434343920002738,0.821905290201534,0.358121926479791,0,0.197030760201927,0,0,1.01637849688985,1.30139853857622,5.41302168944387,3.35032530668698,6.37938751653163,0,0,0,0.613457458595699,1.50051156317903,0.271265023699736,6.03115498439341,5.35286966391485,7.254311091561,6.67706065458465,0,0,2.0694614258501,4.64957918974806,0,1.30325421702124,0.783204629850962,2.74514739048685,0,0.215714200818617,0.106727557803444,6.97193414326397,3.32870879020994,5.14063498660456,0.496215615637554,0.767309866440312,1.12264037773229,0.640695746278505,0,2.41280881715411,0,0.925258162815933,1.06537035187876,0.821271560138091,1.55776328755086,2.32420756919918,3.98836183652353,1.20303882181971,7.64272208167939,0.34444334449382,0.546273504020151,0.655622074797121,0.451199612907412,1.30926073077505,2.35304930753057,1.46139224653261,0.73886140225013,2.27466768141793,1.70093705276516,2.59099099322567,1.54227252690289,1.35473218771926,2.50844886927427,3.05851527654046,3.3243040357149,2.91037181138832,12.2785530921723,18.0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| |||
|short_description=p@chr22:38201945..38202027,- | |||
}} |
Latest revision as of 21:04, 28 July 2015
Short description: | p@chr22:38201945..38202027, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:38201945..38202027, - |
Coexpression cluster: | C4099_malignant_Reticulocytes_rectal_neuroblastoma_choriocarcinoma_small_hepatocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.55e-12 | 253 |
neurectodermal cell | 5.56e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.15e-09 | 160 |
endoderm | 4.15e-09 | 160 |
presumptive endoderm | 4.15e-09 | 160 |
digestive system | 5.00e-07 | 145 |
digestive tract | 5.00e-07 | 145 |
primitive gut | 5.00e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.43e-22 | 143 |
carcinoma | 1.76e-14 | 106 |
cancer | 3.49e-12 | 235 |
disease of cellular proliferation | 1.87e-11 | 239 |
germ cell and embryonal cancer | 4.24e-08 | 22 |
germ cell cancer | 4.24e-08 | 22 |