FFCP PHASE1:Hg19::chr2:162137741..162137745,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:162137741..162137745,+ | |||
|coexpression_cluster_id=C398 | |||
|description=CAGE_peak_at_chr2:162137741..162137745,+ | |||
|id=chr2:162137741..162137745,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;9.08e-24;5!CL:0002253;2.37e-15;2!CL:0000214;1.20e-10;3!CL:0002321;1.31e-08;15!CL:0002563;2.43e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,2.37e-15,2;CL:0000214,1.20e-10,3;CL:0002563,2.43e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!2.76e-21!22;DOID:2994!2.76e-21!22;DOID:171!6.76e-21!10;DOID:0050687!3.69e-19!143;DOID:162!3.37e-17!235;DOID:14566!1.15e-16!239;DOID:1115!2.47e-12!20;DOID:169!6.23e-12!6;DOID:3905!2.51e-11!9;DOID:0050615!7.89e-09!16;DOID:3908!3.89e-08!5;DOID:305!3.34e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:171;1.12e-45;10!DOID:3095;3.75e-21;22!DOID:2994;3.75e-21;22!DOID:169;5.35e-20;6!DOID:3193;1.15e-15;2!DOID:962;1.15e-15;2!DOID:1192;6.73e-11;3!DOID:3119;4.75e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.12e-45,10;DOID:3095,3.75e-21,22;DOID:2994,3.75e-21,22;DOID:169,5.35e-20,6;DOID:3193,1.15e-15,2;DOID:962,1.15e-15,2;DOID:1192,6.73e-11,3;DOID:3119,4.75e-09,14;DOID:0050687,2.45e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000013!1.99e-08!5;UBERON:0002410!1.99e-08!5;UBERON:0000473!4.01e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;3.16e-29;4!UBERON:0000923;3.16e-29;4!UBERON:0010316;3.16e-29;4!UBERON:0005291;3.16e-29;4!UBERON:0000013;9.08e-24;5!UBERON:0002410;9.08e-24;5!UBERON:0002050;1.28e-23;5!UBERON:0005423;1.28e-23;5!UBERON:0003714;1.15e-15;2!UBERON:0000010;1.08e-13;8!UBERON:0006915;1.20e-10;3!UBERON:0007616;1.20e-10;3!UBERON:0002217;1.20e-10;3!UBERON:0002018;1.20e-10;3!UBERON:0001052;2.43e-08;4!UBERON:0001242;2.43e-08;4!UBERON:0001262;2.43e-08;4!UBERON:0004786;2.43e-08;4!UBERON:0004808;2.43e-08;4!UBERON:0001277;2.43e-08;4!UBERON:0004907;6.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,9.08e-24,5;UBERON:0002410,9.08e-24,5;UBERON:0003714,1.15e-15,2;UBERON:0000010,1.08e-13,8;UBERON:0006915,1.20e-10,3;UBERON:0007616,1.20e-10,3;UBERON:0002217,1.20e-10,3;UBERON:0002018,1.20e-10,3;UBERON:0001052,2.43e-08,4;UBERON:0001242,2.43e-08,4;UBERON:0001262,2.43e-08,4;UBERON:0004786,2.43e-08,4;UBERON:0004808,2.43e-08,4;UBERON:0001277,2.43e-08,4;UBERON:0004907,6.39e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,7.87332456134787,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,4.54416143458391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0.264768380074501,0,0.274083849293502,0.794858446811959,0,0,0,0,0,0.144090417154106,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0.105600336519406,0.35857467866569,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.218955045808,0.109209638192014,25.7993445530118,0,6.32072397720911,92.1764114655852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0.527613733078862,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0.11294608203896,0,0,0,0,0,0,0.707029641304878,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52434499509095,0,0,0,0,0,0,0.378499274505237,0.109265571963696,0,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0.560659312903067,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr2:162137741..162137745,+ | |||
}} |
Latest revision as of 01:53, 29 July 2015
Short description: | p@chr2:162137741..162137745, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:162137741..162137745, + |
Coexpression cluster: | C398_neuroepithelioma_neuroectodermal_carcinoid_neuroblastoma_spinal_brain_synovial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 2.37e-15 | 2 |
synovial cell | 1.20e-10 | 3 |
intestinal epithelial cell | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 9.08e-24 | 5 |
autonomic nervous system | 9.08e-24 | 5 |
neural tissue | 1.15e-15 | 2 |
peripheral nervous system | 1.08e-13 | 8 |
stratified squamous epithelium | 1.20e-10 | 3 |
layer of synovial tissue | 1.20e-10 | 3 |
synovial joint | 1.20e-10 | 3 |
synovial membrane of synovial joint | 1.20e-10 | 3 |
rectum | 2.43e-08 | 4 |
intestinal mucosa | 2.43e-08 | 4 |
wall of intestine | 2.43e-08 | 4 |
gastrointestinal system mucosa | 2.43e-08 | 4 |
gastrointestinal system epithelium | 2.43e-08 | 4 |
intestinal epithelium | 2.43e-08 | 4 |
lower digestive tract | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.12e-45 | 10 |
germ cell and embryonal cancer | 3.75e-21 | 22 |
germ cell cancer | 3.75e-21 | 22 |
neuroendocrine tumor | 5.35e-20 | 6 |
peripheral nerve sheath neoplasm | 1.15e-15 | 2 |
neurofibroma | 1.15e-15 | 2 |
peripheral nervous system neoplasm | 6.73e-11 | 3 |
gastrointestinal system cancer | 4.75e-09 | 14 |
cell type cancer | 2.45e-07 | 143 |