FFCP PHASE1:Hg19::chr2:197791712..197791747,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80055 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25712 | |||
|TSSclassifier=strong | |||
|UniProt=A6NI33 | |||
|association_with_transcript=-243bp_to_ENST00000374738_5end | |||
|cluster_id=chr2:197791712..197791747,- | |||
|description=CAGE_peak_4_at_PGAP1_5end | |||
|id=chr2:197791712..197791747,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.91e-08;6!CL:0000404;2.91e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.66e-10,8;CL:0000540,3.56e-08,6;CL:0000031,3.56e-08,6;CL:0000404,3.56e-08,6;CL:0002322,3.20e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000031;2.91e-08;6!UBERON:0006601;1.10e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.80e-23!94;UBERON:0001016!8.80e-23!94;UBERON:0001017!1.59e-22!82;UBERON:0005743!4.21e-22!86;UBERON:0001049!2.36e-17!57;UBERON:0005068!2.36e-17!57;UBERON:0006241!2.36e-17!57;UBERON:0007135!2.36e-17!57;UBERON:0002616!3.87e-17!59;UBERON:0000955!1.89e-16!69;UBERON:0006238!1.89e-16!69;UBERON:0002346!4.93e-16!90;UBERON:0000924!5.40e-16!173;UBERON:0006601!5.40e-16!173;UBERON:0004121!1.66e-14!169;UBERON:0003075!2.67e-14!86;UBERON:0007284!2.67e-14!86;UBERON:0003080!1.39e-13!42;UBERON:0002780!3.64e-13!41;UBERON:0001890!3.64e-13!41;UBERON:0006240!3.64e-13!41;UBERON:0007023!1.40e-12!115;UBERON:0000153!7.40e-11!129;UBERON:0007811!7.40e-11!129;UBERON:0003056!9.23e-11!61;UBERON:0000033!1.59e-10!123;UBERON:0002020!7.46e-10!34;UBERON:0003528!7.46e-10!34;UBERON:0001893!9.03e-10!34;UBERON:0002791!2.17e-09!33;UBERON:0001869!4.50e-09!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;7.44e-14;53!UBERON:0002616;7.44e-14;53!UBERON:0002780;2.91e-12;41!UBERON:0001890;2.91e-12;41!UBERON:0001016;7.96e-12;83!UBERON:0000125;2.04e-10;9!UBERON:0002308;2.04e-10;9!UBERON:0001017;2.31e-10;75!UBERON:0003528;1.27e-09;34!UBERON:0002020;1.27e-09;34!UBERON:0000955;1.96e-09;68!UBERON:0002791;3.00e-09;32!UBERON:0001894;3.63e-09;7!UBERON:0001893;3.78e-09;34!UBERON:0001869;6.06e-09;32!UBERON:0009663;1.99e-08;7!UBERON:0004732;3.64e-08;13!UBERON:0004733;4.04e-07;12!UBERON:0002028;4.04e-07;12!UBERON:0000922;4.83e-07;49!UBERON:0002298;7.57e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.04e-32,89;UBERON:0001017,2.25e-31,81;UBERON:0001049,1.18e-24,56;UBERON:0005068,1.18e-24,56;UBERON:0006241,1.18e-24,56;UBERON:0007135,1.18e-24,56;UBERON:0000073,4.34e-23,53;UBERON:0002616,4.34e-23,53;UBERON:0002346,5.79e-22,86;UBERON:0000955,8.10e-21,68;UBERON:0006238,8.10e-21,68;UBERON:0003075,1.59e-19,82;UBERON:0007284,1.59e-19,82;UBERON:0004121,9.47e-18,171;UBERON:0000924,9.47e-18,171;UBERON:0006601,9.47e-18,171;UBERON:0002780,4.01e-17,41;UBERON:0001890,4.01e-17,41;UBERON:0003080,4.01e-17,41;UBERON:0006240,4.01e-17,41;UBERON:0010371,1.43e-15,104;UBERON:0003056,4.80e-14,61;UBERON:0011216,2.78e-13,223;UBERON:0007023,1.39e-11,114;UBERON:0003528,3.40e-11,34;UBERON:0002020,3.40e-11,34;UBERON:0010314,3.52e-11,132;UBERON:0001893,4.57e-11,34;UBERON:0000125,1.01e-10,9;UBERON:0002308,1.01e-10,9;UBERON:0001869,7.91e-10,32;UBERON:0002791,9.49e-10,32;UBERON:0001894,4.81e-09,7;UBERON:0006222,4.81e-09,7;UBERON:0009663,6.21e-09,7;UBERON:0003076,8.36e-09,15;UBERON:0003057,8.36e-09,15;UBERON:0004732,1.97e-08,13;UBERON:0000025,1.65e-07,192;UBERON:0004733,2.56e-07,12;UBERON:0002028,2.56e-07,12;UBERON:0007277,2.56e-07,12;UBERON:0002298,5.36e-07,6 | |||
|phase1_expression=0.726713517082227,0,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0.263766978228454,0.495065411840187,0.331397375727916,0,0,0,0,0.246242116153576,0.204000691244253,0,0.572471974262113,1.50561867580173,0.627713197974014,0.305653622991805,0.164201178899891,0.157421562627358,0,0,0,0.919421224478927,0.30120591877825,0,0.542270404062111,0.284338464974843,0.293600439334847,0,0,1.08505435357926,0,0.32389366601898,0.515151135268373,0.436194716338694,0.377875943688809,0.970336244751265,0,0,0,0.863077176966451,1.0246428261164,0.709446689665756,0.344745680736619,0.645484683583826,0,0,0,0.224723484445085,0,0,0,2.63881040149373,2.19410023383795,0.426224750532694,0,0.56738522469114,0,1.00499466102697,2.08593167368081,0.65156653411535,0.605399502633369,0.368277635987565,0,0,0,0,0,0.300353785683013,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334372990781356,0,0,0,0.222820913770347,0,0.221533894583621,0,0.25618263945135,0.910415432919148,1.15106533222573,0.552700035571697,0.579606171470105,0.14828656316206,0,0,0.339928028092699,0,0,0,0.318565414324097,0,0.950452044448374,0.150575119077773,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,2.43806866313962,0,0.12786256184353,1.0843174571537,1.00267582127178,0.289693037921647,0,0,1.22895262313288,0.665188192387692,0.614843499851882,0.589405839739707,0,0,0.324547393654683,0,0.26591592103773,0,0,0,0.39752481473341,0,1.38856200643038,0.56530794192401,0.419499436209906,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0,0,0.367663080345869,0.81014194788176,0.714397826272638,0.44905874525234,0.450445921933289,0,0,0.366403487860815,0,0,0,0.496971951695318,0.25326102332916,0,0.860509862246441,0.354668382198357,0,0,0.24666754841716,1.24484414159907,0.404132016209064,0.326923806226917,0.454072282934794,1.15235184896,0,0,0.570471821544449,0.149448680551801,0.587172493218824,0.161872944368132,0.280901613404497,0.408308342509787,0.61417158655884,0.826606249406124,0,0.247266929278557,0,0,0.841680569770331,0.875829639103749,0.277064115484183,0.438977620880838,0.30648779579902,0.150238058906597,0.680593098960126,1.25572744982203,0.213557388818567,0,1.20036438433761,0.309157587715317,1.03056216018252,0.18611685633159,1.5189869901714,0.487185025805993,2.27190396819703,0.276149695926898,0.323292113637624,3.55009592516614,0.705264687593482,0.339121184620975,0,0,0.286804595389004,1.82960559194393,2.91565490307268,2.44007280025989,1.7622379352613,1.7662459561294,1.82488679537915,0,0.643240938192885,0,0,0,0,0.505754070234305,0,0.220587945464788,0,0,0,0,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,0,7.06340959063441,0.368965315629341,0.343135620597051,0.219500570817251,0,0.402115889646523,0.555530670951178,0,0,0,0.695582429850461,0.117408694235822,0.288732895522148,0.462985512576611,0.190254152234598,0,0,0.492434012174795,0,0.445893486866185,0,0,0,0.268675568108545,0.581267877027924,0.383382679165211,0,0,0,0,0,0.761974731506028,1.14596527667483,1.17217447210047,1.71072446022705,0.308482478109971,0.901029173531752,0.571652865261156,0.336393253036082,0.87192013766656,0.95339771567235,0.387815147273333,0,0.845302752556,0,1.04007436911366,0,1.41849132023278,0.532844358032199,0.428933980974443,0.542621605391443,0,0,0.355391948742546,0.791951872933429,0,0,0.099972991182057,0,0.502257091432126,0,0,1.14861935834114,0,0.289562613335158,0.205476322550383,0.716243852959582,0.112085143993527,0,0,0.128343036279748,2.03275699377971,2.60279707715243,1.54657762555539,1.00509759200609,3.18969375826582,0,0,0.414415513436035,0.49076596687656,0.500170521059677,0.542530047399471,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0.601892199455438,0,0,0,0.184369168541703,0.260650843404249,0,1.02943027143257,0.206768026122887,0.431428401637234,0.320182673410333,0.303127571446259,0,0.30239029332968,0.496215615637554,0.153461973288062,0,0.256278298511402,0.511707249066704,0.321707842287215,0,0.154209693802656,0.532685175939381,0.328508624055237,0.519254429183621,0.232420756919918,0.241718899183244,0,0.184161977871793,0.114814448164607,0.364182336013434,0.131124414959424,0.451199612907412,0.616122696835318,2.35304930753057,0,0.422206515571503,0,0.340187410553031,0.215915916102139,1.54227252690289,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0.650756789328606,0.515205058238611,0.366277859273374,0.577566499444116,0,0,0,0.193341436584244,0.770243085573222,1.38153307253517,0.413509717453592,1.82614416276065,1.16013355131383,0.93749290157711,0.712256285173899,0,0,1.14851441245126,0,0,0,0,0,0,0,0,0,1.48863347743867,0.632758849437452,0.571890581771475,0.255897791311334,0,0.636406495851874,0.78494864019923,0.539617372749944,0.823611089208164,0.117812402345686,0,0,0.421258456238981,0,0.243713489631284,0,0.272999822815972,0.424216295861138,0,0,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0.286822704408103,0.196498082026242,0,0.354761064070598,0,0,0.379473173765715,0.349934720244983,0.48111056362756,0.670302275535787,0,0.659006605437454,0,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0.854592569019785,0.962479855263359,0.980160863924127,0.185803175125719,0.28853842595289,0.711418433484141,2.07254154547469,0,0,0.211673582723883,1.29848776109822,0,0.456469358066384,0.156679895773023,2.50634477090067,0.338583555603207,0.1605880751037,0.403599414382095,1.70338495076131,0.687010689511529,0.307240764308458,0.447352215784832,1.00109485027145,0.19538809540204,0,0,0.270455678475983,0.66614393599564,0,0.18714054040822,0.879049075631364,1.69904730449319,0.66866030566487,0.284136146806413,0.23874448473769,0.890894042497916,0.921482106297696,0,0.844016498463076,0.333926115068718,0.494411622680279,0.63337622438398,0.398495976502139,0.276283915531148,1.51159648712566,0.102268682502155,0.123084805461069,0,0.269605053441981,0.179021174675609,0.511572370226872,0.986434056369336,0,0,0.969332746095218,1.11321717794222,0,0.260427761085233,0.0874599999961957,1.44999915086959,0.568967241427498,0.762760950878299,0.945550727071745,2.41320361269025,0.874813840149763,2.43074992906609,6.20018970069687,1.92954301800653,4.5774520895125,1.76926815889959,2.06883333267483,1.31631238292384,0,0.278847488557207,1.61595542857974,0.113942055847001,0.46112780877612,0.179515288819544,0.760531603454056,1.27600463892768,0.274792780205587,0,0,0,0.166211681900156,0.225595660617181,0,0,0,0,0.210998064528027,0.163232808159148,0.282706142867882,0.216388639742091,1.99052386215701,0.619202951523374,0,2.37216902944498,0.123563938946503,0.208843899010911,1.28062152663286,0.802577647298789,1.40558667435203,0,0.391329237864179,3.3989253134773,0.394584402849391,1.20990716048664,1.22429104652196,1.64285107034069,0.300646838828985,1.14057010536972,0,0.992975867626496,0.627865836814451,0,0.284609546029793,0.970722711091971,0,0,0.0870592065804026,1.22308667769421,1.37588825977293,0.0967563312890851,0.146178634172371,0.0821154570532092,0.775912131907355,1.1473296469895,0.451961481561065,0.685209623233754,0.794858446811959,1.45614830698521,0.195551382734803,0,1.28071796843612,0,0,1.37443915399099,1.71594997861965,0,1.24252535565433,0.942776138467182,0.67952103036807,0.523014231561666,0.407992870545287,0,1.80126086612937,1.50595916781192,3.83239764200917,0.429765441419957,0.262887354279314,1.39641200636127,0.687481272035051,0,0.399358000997982,0.429226048136571,0.89268582976749,0.806201669840715,0,2.32991899054908,2.12714592229504,1.97798060114799,1.14586024552114,0,0.423366660328922,1.59045937961861,1.49823746722733,2.57205037544031,2.47570985875021,3.32352270423348,0.2249738915515,2.32140586367385,1.21499113316049,0,0.157611414598396,0.524545881349981,1.16160370171347,0.717149357331379,0.191915197319445,0.714695326373367,0,1.27134268827375,0,0,0,2.39460383124975,0.492555124496034,0.851940108927109,0.226624183040251,0.293104467356165,2.65013777824443,1.16354660725395,2.11572162788304,0.684347351537318,0,0.961086713109252,1.72924735609633,1.65695622138878,0.496166021811951,0.197611631897944,0,0.638341257770182,0,0.2506898940227,0.306345576763462,0.327872630709804,1.25643277000187,0,1.46431517882356,1.001527445652,1.72022758707021,1.55300672151593,1.4903136705932,1.66018361923477,0.124980407962107,0.303298235083296,0,0,4.21501415226193,3.4781046866598,0.447764408660622,0,0.554805861502613,0,0.50313580350515,0,0.228840068396924,0.302461847526478,0.621748802331122,0.147855149989634,0.955780602982214,0,0.155262956876259,0.414706207840855,0,0,0.450772826991655,0,0,0.181848659202559,0.537052785212442,0,0.398095888698616,1.60011105865261,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0.244736704506468,0.537266523244462,0,0.657852148736121,0.353378291891762,0,0.168942440653073,0,0.690860683462397,0,0.967809053062115,0.194860308839388,0.132864840313363,0,0,0,0,0.19998739585493,0.426766918776564,0,0,0,0,0,1.53473245564382,2.69562028491704,0,2.07498312564826,0.678930119816101,14.4550945669144,3.22232987073406,0.558644917973244,0,0.47317047000752,3.20228299314188,0.352675943690684,0,1.54150140231503,0,1.11743701340006,0.615349092722265,3.27693205088234,0.691572524642179,0.968853873791107,2.85538840518309,0.785181748008205,0.235939446695481,0.366857197043358,0.115525666150338,0.381382095467167,0,1.98916222116275,1.42899623863589,0.80682027481408,0,5.76194727859129,0.327543835020193,0.295712172434091,1.35075169236789,0.781078098613847,1.03343398250592,0.824405532520789,6.01672289920042,0,0.496211178389294,4.22090986463089,0.511049710558381,1.07140367175657,2.35398605553177,5.46269043812968,4.55324382702595,0.709618961301111,0.576169937778896,0.342976018874837,1.2914249265598,0.986591603442736,0.118193840883968,0.444925607568277,0.863424021355654,5.65616123697607,0,1.82631744101899,0,0,1.78691360441641,3.00225862292181,0.23248285073625,0.347716544605159,0,0.414432328326074,0.17071847709395,0.691259661814092,0,0.354996002191696,0.596493833314104,0.846774100381858,0.68732060563215,0,0,0,0.098150233615243,0,0,0.205325613712494,2.3196288626764,2.91426595835484,3.04121302500737,12.1359972848435,0.951360726220549,1.35535298446752,3.07833446887202,2.11347980993343,0.617393264863557,0.874238242015829,1.41095188908457,0.490296643507811,0.942706188406504,5.69294554633341,2.67341760294377,0.4226557275834,0.169927114687817,0.0939839179798536,0.902410431630081,0.89947040332436,0.535661815816973,0,0.160482733378337,0.730336388246517,0,1.14671666521161,1.26217249754548,0.475940431336403,2.18175345170189,1.0580536810308,0.371995018166751,0,0,2.14482922219634,0.874124575709564,1.77377901416012,0.305966489225945,0,0.275684698604535,0,0.454672189309436,0.803892390468535,1.65833887891756,2.1720929130998,0.852935927603924,1.66645102024618,0.645889098360061,1.11734485732544,0.112131862580613,0.190941474834495,1.61693751166575,0.870866991587845,2.39563310759697,0.404112318087525,0.717222053926764,0.99798106963804,0.976839223331694,0.960546112899439,0,0.359300808426348,0,1.1001729976458,2.84827324821017,0.665756774185513,0.201273793591026,0 | |||
|short_description=p4@PGAP1 | |||
}} |
Latest revision as of 07:37, 19 September 2015
Short description: | p4@PGAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PGAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -243bp_to_ENST00000374738_5end |
EntrezGene: | PGAP1 |
HGNC: | 25712 |
UniProt: | A6NI33 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.66e-10 | 8 |
neuron | 3.56e-08 | 6 |
neuroblast | 3.56e-08 | 6 |
electrically signaling cell | 3.56e-08 | 6 |
embryonic stem cell | 3.20e-07 | 5 |