FFCP PHASE1:Mm9::chr10:13272961..13272972,-: Difference between revisions
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{{FFCP|EntrezGene=56535|HGNC=|MCL_coexpression_id=60|UniProt=E9QA46,Q3UIG2,Q9QXY9|association_with_transcript=-13bp_to_ENSMUST00000170376,NM_001164195,NM_019961,uc007ekx.2,uc007eky.2_5end|description=CAGE_peak_6_at_Pex3_5end|id=chr10:13272961..13272972,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002611,8.30e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.38e-11!34;UBERON:0000073!3.04e-11!75;UBERON:0001016!3.04e-11!75;UBERON:0001049!5.90e-11!52;UBERON:0005068!5.90e-11!52;UBERON:0006241!5.90e-11!52;UBERON:0007135!5.90e-11!52;UBERON:0001017!6.03e-11!73;UBERON:0005743!6.03e-11!73;UBERON:0000955!4.78e-09!50;UBERON:0006238!4.78e-09!50;UBERON:0002791!6.10e-09!29;UBERON:0003528!6.10e-09!29;UBERON:0001893!6.10e-09!29;UBERON:0002346!8.56e-09!71;UBERON:0003075!8.56e-09!71;UBERON:0007284!8.56e-09!71;UBERON:0000033!8.94e-09!63;UBERON:0002616!1.00e-08!49;UBERON:0004121!1.17e-08!102;UBERON:0000924!1.17e-08!102;UBERON:0006601!1.17e-08!102;UBERON:0003080!3.10e-08!40;UBERON:0004111!3.55e-08!122;UBERON:0003056!4.03e-08!49;UBERON:0002780!6.16e-08!39;UBERON:0001890!6.16e-08!39;UBERON:0006240!6.16e-08!39;UBERON:0000025!8.20e-08!114;UBERON:0002021!3.79e-07!10;UBERON:0000411!3.79e-07!10;UBERON:0001950!3.79e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.77e-15,10;UBERON:0000411,5.77e-15,10;UBERON:0001950,5.77e-15,10;UBERON:0002020,9.24e-15,34;UBERON:0002619,2.08e-13,17;UBERON:0000956,4.93e-13,21;UBERON:0001869,4.93e-13,21;UBERON:0000203,4.93e-13,21;UBERON:0000073,9.91e-13,54;UBERON:0001049,1.25e-11,52;UBERON:0005068,1.25e-11,52;UBERON:0006241,1.25e-11,52;UBERON:0007135,1.25e-11,52;UBERON:0003528,8.35e-11,29;UBERON:0002791,8.35e-11,29;UBERON:0001893,8.35e-11,29;UBERON:0001017,1.13e-09,73;UBERON:0001016,2.57e-09,75;UBERON:0002346,7.94e-09,64;UBERON:0003075,7.94e-09,64;UBERON:0007284,7.94e-09,64;UBERON:0002616,1.24e-08,46;UBERON:0000955,2.15e-08,47;UBERON:0006238,2.15e-08,47;UBERON:0002780,1.69e-07,39;UBERON:0001890,1.69e-07,39;UBERON:0006240,1.69e-07,39;UBERON:0010371,2.46e-07,73;UBERON:0003080,2.93e-07,40;UBERON:0002256,8.30e-07,2|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0.0874204024189974,0,0.202475267389826,0,0,0.137114433605739,0,1.36069264241712,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0.125896817975577,0.101376931219515,0.367093504323363,0,0.218025156380447,0.219686182734472,0.777719596297134,0.279972843250725,0,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0.7104801149461,0,0,0.207379224616955,0.405017814995072,0.210324961351382,1.42825492201902,1.10434270475807,0.122490799214954,0.0958454710182364,0,0,1.40456071893706,0.307213066512487,0.923204014111357,0.823388792421687,0.52091337055676,0.558365998002762,1.12552522006336,0.45839474333043,1.17851434189467,0.996601765593721,0.745597783301202,0.302904773332736,0.529000920747499,0,0,0,0,0.649776417447669,0,0.280888840263504,0,0.519572009205738,0.70667914902068,0.281686839553361,1.28326477414318,0,0,0,0.506719730950197,0,0.22836775943812,0.258937883647172,0,0.173485326766136,0.304465478312141,0,0.301445281105245,0.117588707135705,0,0.247194967734374,0.433798070759735,0,0.161766849947409,0,0,0,1.46390398505774,1.04723353406728,0,0.359445373517761,0,0.127070227073065,0.599162557619291,0.915001205637253,0.502617408451458,1.21677024134594,0.767146371990992,0.62336413367868,0.324482526135515,0.81471491080253,0.248813941220186,0,0.420883711772948,0.390361328888111,0,0.360124259610698,0.150704817835715,0.340182495756639,0.384341160854549,0.187403449119458,0.776110112217047,0,0.378212160335639,0.351902248327898,0.219195732427575,0,0.696504333044333,0.205782136407943,0.398068533636986,0.702213187313235,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.771335564436891,0.930135779001631,0.536546802799238,0.700592054203017,0.822799249567402,0.820837320395476,0.729619285912702,0.730999937126662,0.439100230582101,0.671032093801859,1.05144974282064,1.13195073617213,0.330418782983798,0,0,0.928946687441754,0.38660238396628,0.201683524623343,0,0.760902504450237,0.474529061544512,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.228497025219458,1.1270773567308,0.407302655690628,0.387904974335251,0.210407459670956,0.442655759869801,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0.405720242777006,0,0,0.575392274901621,0,0,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0,0.482443521363367,0.184753190166605,0.189491411770485,0.325929952884052,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0.315270288212382,0.221464689648775,0.797273843287435,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0.321101179975584,0.586058432961016,0.327869890753351,0.504941854408746,0.315508219416257,0,0.861693590931196,0.238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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56535 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=E9QA46,Q3UIG2,Q9QXY9 | |||
|association_with_transcript=-13bp_to_ENSMUST00000170376,NM_001164195,NM_019961,uc007ekx.2,uc007eky.2_5end | |||
|cluster_id=chr10:13272961..13272972,- | |||
|description=CAGE_peak_6_at_Pex3_5end | |||
|id=chr10:13272961..13272972,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002611,8.30e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.38e-11!34;UBERON:0000073!3.04e-11!75;UBERON:0001016!3.04e-11!75;UBERON:0001049!5.90e-11!52;UBERON:0005068!5.90e-11!52;UBERON:0006241!5.90e-11!52;UBERON:0007135!5.90e-11!52;UBERON:0001017!6.03e-11!73;UBERON:0005743!6.03e-11!73;UBERON:0000955!4.78e-09!50;UBERON:0006238!4.78e-09!50;UBERON:0002791!6.10e-09!29;UBERON:0003528!6.10e-09!29;UBERON:0001893!6.10e-09!29;UBERON:0002346!8.56e-09!71;UBERON:0003075!8.56e-09!71;UBERON:0007284!8.56e-09!71;UBERON:0000033!8.94e-09!63;UBERON:0002616!1.00e-08!49;UBERON:0004121!1.17e-08!102;UBERON:0000924!1.17e-08!102;UBERON:0006601!1.17e-08!102;UBERON:0003080!3.10e-08!40;UBERON:0004111!3.55e-08!122;UBERON:0003056!4.03e-08!49;UBERON:0002780!6.16e-08!39;UBERON:0001890!6.16e-08!39;UBERON:0006240!6.16e-08!39;UBERON:0000025!8.20e-08!114;UBERON:0002021!3.79e-07!10;UBERON:0000411!3.79e-07!10;UBERON:0001950!3.79e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.77e-15,10;UBERON:0000411,5.77e-15,10;UBERON:0001950,5.77e-15,10;UBERON:0002020,9.24e-15,34;UBERON:0002619,2.08e-13,17;UBERON:0000956,4.93e-13,21;UBERON:0001869,4.93e-13,21;UBERON:0000203,4.93e-13,21;UBERON:0000073,9.91e-13,54;UBERON:0001049,1.25e-11,52;UBERON:0005068,1.25e-11,52;UBERON:0006241,1.25e-11,52;UBERON:0007135,1.25e-11,52;UBERON:0003528,8.35e-11,29;UBERON:0002791,8.35e-11,29;UBERON:0001893,8.35e-11,29;UBERON:0001017,1.13e-09,73;UBERON:0001016,2.57e-09,75;UBERON:0002346,7.94e-09,64;UBERON:0003075,7.94e-09,64;UBERON:0007284,7.94e-09,64;UBERON:0002616,1.24e-08,46;UBERON:0000955,2.15e-08,47;UBERON:0006238,2.15e-08,47;UBERON:0002780,1.69e-07,39;UBERON:0001890,1.69e-07,39;UBERON:0006240,1.69e-07,39;UBERON:0010371,2.46e-07,73;UBERON:0003080,2.93e-07,40;UBERON:0002256,8.30e-07,2 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0.0874204024189974,0,0.202475267389826,0,0,0.137114433605739,0,1.36069264241712,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0.125896817975577,0.101376931219515,0.367093504323363,0,0.218025156380447,0.219686182734472,0.777719596297134,0.279972843250725,0,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0.7104801149461,0,0,0.207379224616955,0.405017814995072,0.210324961351382,1.42825492201902,1.10434270475807,0.122490799214954,0.0958454710182364,0,0,1.40456071893706,0.307213066512487,0.923204014111357,0.823388792421687,0.52091337055676,0.558365998002762,1.12552522006336,0.45839474333043,1.17851434189467,0.996601765593721,0.745597783301202,0.302904773332736,0.529000920747499,0,0,0,0,0.649776417447669,0,0.280888840263504,0,0.519572009205738,0.70667914902068,0.281686839553361,1.28326477414318,0,0,0,0.506719730950197,0,0.22836775943812,0.258937883647172,0,0.173485326766136,0.304465478312141,0,0.301445281105245,0.117588707135705,0,0.247194967734374,0.433798070759735,0,0.161766849947409,0,0,0,1.46390398505774,1.04723353406728,0,0.359445373517761,0,0.127070227073065,0.599162557619291,0.915001205637253,0.502617408451458,1.21677024134594,0.767146371990992,0.62336413367868,0.324482526135515,0.81471491080253,0.248813941220186,0,0.420883711772948,0.390361328888111,0,0.360124259610698,0.150704817835715,0.340182495756639,0.384341160854549,0.187403449119458,0.776110112217047,0,0.378212160335639,0.351902248327898,0.219195732427575,0,0.696504333044333,0.205782136407943,0.398068533636986,0.702213187313235,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.771335564436891,0.930135779001631,0.536546802799238,0.700592054203017,0.822799249567402,0.820837320395476,0.729619285912702,0.730999937126662,0.439100230582101,0.671032093801859,1.05144974282064,1.13195073617213,0.330418782983798,0,0,0.928946687441754,0.38660238396628,0.201683524623343,0,0.760902504450237,0.474529061544512,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.228497025219458,1.1270773567308,0.407302655690628,0.387904974335251,0.210407459670956,0.442655759869801,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0.405720242777006,0,0,0.575392274901621,0,0,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0,0.482443521363367,0.184753190166605,0.189491411770485,0.325929952884052,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0.315270288212382,0.221464689648775,0.797273843287435,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0.321101179975584,0.586058432961016,0.327869890753351,0.504941854408746,0.315508219416257,0,0.861693590931196,0.238968797952552,0.222798674082394,0.283076530788832,0.809621403349789,0.292255857911312,0.395287777946524,0.642642632843614,0.567760340833074,0.534196811001766,0.651547837414304,0.494910368917606,0,0.485561272309963,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0,1.05418608574999,0,0,0.540183282093931,0.258717367565509,0.214337035031592,0.177340233642274,0.713475270408282,0.329098041204242,0,0,0.42366414172764,1.7642271844397,0.32977250588296,0.322928853391811,0.361877549568935,0,0.328281799490123,0.582961673259701,0.18542530201051,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0.339956859987711,0.279902904647316,0.276399947608848,0,0.158167996790568,0.203319467126849,0.108005340821801,0.418176592028937,0,0.134864346384821,0.165306911450672,0,0,0,5.07323644815771,0.149516546043979,0.496375471371293,0.194451188344048,0.387479470433193,0.675824501963113,0.58678619322877,0.39061315453185,0.629156066554265,2.17425708743405,6.04863013141517,0,0,0.102710957164827,0,0.358053391334963,0,0,0.147689527174577,0.100966449948148,0.15241361331,0.403304740547362,0,0,0,0.453460767230423,0,0,0.167884616364078,0.386379188064381,0,0.183151624267265,0.428736758158132,0,0.564751842617067,3.22227665555024,2.86447756719698,1.03111909406213,2.05524755931193,3.7769694869485,0.675022500231806,2.70192721934532,0.906284817968409,1.55328093525546,0.103787347584177,1.19707462020309,0,0,0,0.367687016900028,1.11123363900808,0.824140228955577,0.64183841918363,0.252697211763798,0.25347929989024,0.565879024158229,0.655490552289177,0.384150914429216,0.287177344778066,0.476293691283074,0.231768651889711,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0.436039249896986,0.282328141245992,0.25384382367503,0.365855945745545,0.263069711437843,0.271608227691724,1.12228454331548,0.237270036248348,0.197008964751127,0.409231043169689,0.464810523557898,0.771626443924566,0,0.233931608445408,0.429742108096597,0,0.220591419119515,0.927471342481686 | |||
|short_description=p6@Pex3 | |||
}} |
Latest revision as of 19:46, 25 September 2015
Short description: | p6@Pex3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Pex3_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | -13bp_to_ENSMUST00000170376, NM_001164195, NM_019961, uc007ekx.2, uc007eky.2_5end |
EntrezGene: | Pex3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 8.30e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 5.77e-15 | 10 |
visual cortex | 5.77e-15 | 10 |
neocortex | 5.77e-15 | 10 |
gray matter | 9.24e-15 | 34 |
regional part of cerebral cortex | 2.08e-13 | 17 |
cerebral cortex | 4.93e-13 | 21 |
cerebral hemisphere | 4.93e-13 | 21 |
pallium | 4.93e-13 | 21 |
regional part of nervous system | 9.91e-13 | 54 |
neural tube | 1.25e-11 | 52 |
neural rod | 1.25e-11 | 52 |
future spinal cord | 1.25e-11 | 52 |
neural keel | 1.25e-11 | 52 |
brain grey matter | 8.35e-11 | 29 |
regional part of telencephalon | 8.35e-11 | 29 |
telencephalon | 8.35e-11 | 29 |
central nervous system | 1.13e-09 | 73 |
nervous system | 2.57e-09 | 75 |
neurectoderm | 7.94e-09 | 64 |
neural plate | 7.94e-09 | 64 |
presumptive neural plate | 7.94e-09 | 64 |
regional part of brain | 1.24e-08 | 46 |
brain | 2.15e-08 | 47 |
future brain | 2.15e-08 | 47 |
regional part of forebrain | 1.69e-07 | 39 |
forebrain | 1.69e-07 | 39 |
future forebrain | 1.69e-07 | 39 |
ecto-epithelium | 2.46e-07 | 73 |
anterior neural tube | 2.93e-07 | 40 |
dorsal horn of spinal cord | 8.30e-07 | 2 |