FFCP PHASE1:Mm9::chr10:50614546..50614568,+: Difference between revisions
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{{FFCP|EntrezGene=20464|HGNC=|MCL_coexpression_id=173|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_1_at_Sim1_5end|id=chr10:50614546..50614568,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002613,1.00e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!9.49e-15!14;UBERON:0003918!9.49e-15!14;UBERON:0005095!9.49e-15!14;UBERON:0007687!9.49e-15!14;UBERON:0006554!3.31e-12!16;UBERON:0000489!6.92e-12!21;UBERON:0001008!3.61e-11!17|ontology_enrichment_uberon_v019_2=UBERON:0002113,6.94e-24,14;UBERON:0003918,6.94e-24,14;UBERON:0011143,6.94e-24,14;UBERON:0005095,6.94e-24,14;UBERON:0007687,6.94e-24,14;UBERON:0006554,6.45e-18,18;UBERON:0000489,2.46e-17,21;UBERON:0001008,8.09e-17,19;UBERON:0003103,6.87e-07,43;UBERON:0002420,7.29e-07,8;UBERON:0007245,7.29e-07,8;UBERON:0010009,7.29e-07,8;UBERON:0010011,7.29e-07,8;UBERON:0000454,7.29e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244981598429908,0,0,0,0,0.153606533256243,4.3522474950964,3.38504281328916,2.6045668527838,0,1.12552522006336,1.37518422999129,0.883885756421003,0.142371680799103,1.1183966749518,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0.346970653532272,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0.712875546952214,1.36847667671102,4.80173241023982,0,0,0,0,0.150704817835715,0,0,0,0,0,0.567318240503458,0.527853372491847,0.43839146485515,0.834141747676794,0.696504333044333,0.823128545631774,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0,4.55202962287396,10.1681176222659,12.3978509240388,10.5898690479563,8.14600446104028,8.06561928738663,10.2443190141297,8.85660887877613,8.63493003127561,9.74837594982224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,2.18502572539483,2.72091201268276,0.377210159511796,0.590603785761546,1.22974059177571,0.258428293168221,0,1.06949213515416,0,0,1.03135543248187,0,5.221771726908,2.97524972700335,1.28602221018955,1.95074257006501,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0,0,0.484393280087717,0.301564624640779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,1.21991680276109,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,2.69847103718859,3.59122386060928,1.19513524027894,1.45864030240976,0.838452650511929,0.183843508450014,0.666740183404846,0.412070114477788,1.28367683836726,1.01078884705519,1.52087579934144,0.565879024158229,0.468207537349412,0.704276676453562,0.689225627467359,0.952587382566147,0.695305955669133,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,1.06485483695602,0.238436189947321,1.0174249164263,0.376437521661322,0.846146078916765,0.914639864363863,0.526139422875686,0.407412341537585,0,0.593175090620871,0.591026894253381,0.409231043169689,0.619747364743864,0.192906610981141,0.249810577937946,0.233931608445408,1.07435527024149,0.382576664137687,0,0.231867835620421|short_description=p1@Sim1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20464 | |||
|HGNC= | |||
|MCL_coexpression_id=173 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:50614546..50614568,+ | |||
|description=CAGE_peak_1_at_Sim1_5end | |||
|id=chr10:50614546..50614568,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.00e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!9.49e-15!14;UBERON:0003918!9.49e-15!14;UBERON:0005095!9.49e-15!14;UBERON:0007687!9.49e-15!14;UBERON:0006554!3.31e-12!16;UBERON:0000489!6.92e-12!21;UBERON:0001008!3.61e-11!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,6.94e-24,14;UBERON:0003918,6.94e-24,14;UBERON:0011143,6.94e-24,14;UBERON:0005095,6.94e-24,14;UBERON:0007687,6.94e-24,14;UBERON:0006554,6.45e-18,18;UBERON:0000489,2.46e-17,21;UBERON:0001008,8.09e-17,19;UBERON:0003103,6.87e-07,43;UBERON:0002420,7.29e-07,8;UBERON:0007245,7.29e-07,8;UBERON:0010009,7.29e-07,8;UBERON:0010011,7.29e-07,8;UBERON:0000454,7.29e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244981598429908,0,0,0,0,0.153606533256243,4.3522474950964,3.38504281328916,2.6045668527838,0,1.12552522006336,1.37518422999129,0.883885756421003,0.142371680799103,1.1183966749518,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0.346970653532272,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0.712875546952214,1.36847667671102,4.80173241023982,0,0,0,0,0.150704817835715,0,0,0,0,0,0.567318240503458,0.527853372491847,0.43839146485515,0.834141747676794,0.696504333044333,0.823128545631774,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0,4.55202962287396,10.1681176222659,12.3978509240388,10.5898690479563,8.14600446104028,8.06561928738663,10.2443190141297,8.85660887877613,8.63493003127561,9.74837594982224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,2.18502572539483,2.72091201268276,0.377210159511796,0.590603785761546,1.22974059177571,0.258428293168221,0,1.06949213515416,0,0,1.03135543248187,0,5.221771726908,2.97524972700335,1.28602221018955,1.95074257006501,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0,0,0.484393280087717,0.301564624640779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,1.21991680276109,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,2.69847103718859,3.59122386060928,1.19513524027894,1.45864030240976,0.838452650511929,0.183843508450014,0.666740183404846,0.412070114477788,1.28367683836726,1.01078884705519,1.52087579934144,0.565879024158229,0.468207537349412,0.704276676453562,0.689225627467359,0.952587382566147,0.695305955669133,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,1.06485483695602,0.238436189947321,1.0174249164263,0.376437521661322,0.846146078916765,0.914639864363863,0.526139422875686,0.407412341537585,0,0.593175090620871,0.591026894253381,0.409231043169689,0.619747364743864,0.192906610981141,0.249810577937946,0.233931608445408,1.07435527024149,0.382576664137687,0,0.231867835620421 | |||
|short_description=p1@Sim1 | |||
}} |
Latest revision as of 01:38, 26 September 2015
Short description: | p1@Sim1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sim1_5end |
Coexpression cluster: | MCL_coexpression_mm9:173 |
Association with transcript: | NA |
EntrezGene: | Sim1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.00e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
kidney | 6.94e-24 | 14 |
kidney mesenchyme | 6.94e-24 | 14 |
upper urinary tract | 6.94e-24 | 14 |
kidney rudiment | 6.94e-24 | 14 |
kidney field | 6.94e-24 | 14 |
urinary system structure | 6.45e-18 | 18 |
cavitated compound organ | 2.46e-17 | 21 |
renal system | 8.09e-17 | 19 |
compound organ | 6.87e-07 | 43 |
basal ganglion | 7.29e-07 | 8 |
nuclear complex of neuraxis | 7.29e-07 | 8 |
aggregate regional part of brain | 7.29e-07 | 8 |
collection of basal ganglia | 7.29e-07 | 8 |
cerebral subcortex | 7.29e-07 | 8 |