FFCP PHASE1:Hg19::chr2:233415247..233415320,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200765 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14523 | |||
|TSSclassifier=strong | |||
|UniProt=Q96MW7 | |||
|association_with_transcript=-21bp_to_ENST00000408957,NM_145702,uc002vsy.1_5end | |||
|cluster_id=chr2:233415247..233415320,- | |||
|description=CAGE_peak_1_at_TIGD1_5end | |||
|id=chr2:233415247..233415320,- | |||
|ontology_enrichment_celltype=CL:0000542!8.34e-16!53;CL:0000051!8.34e-16!53;CL:0000838!2.26e-15!52;CL:0000084!4.29e-10!25;CL:0000827!4.29e-10!25;CL:0000791!3.26e-09!18;CL:0000789!3.26e-09!18;CL:0002420!3.26e-09!18;CL:0002419!3.26e-09!18;CL:0000790!3.26e-09!18;CL:0000037!3.74e-09!172;CL:0000566!3.74e-09!172;CL:0000988!5.93e-09!182;CL:0002032!1.78e-08!165;CL:0000837!1.78e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.79e-10;25!CL:0000542;5.36e-10;53!CL:0000791;3.11e-09;18!CL:0000789;3.11e-09;18!CL:0002419;3.11e-09;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,8.29e-16,53;CL:0000051,8.29e-16,53;CL:0000838,2.24e-15,52;CL:0000084,4.27e-10,25;CL:0000827,4.27e-10,25;CL:0000791,3.24e-09,18;CL:0000789,3.24e-09,18;CL:0002420,3.24e-09,18;CL:0002419,3.24e-09,18;CL:0000790,3.24e-09,18;CL:0000988,3.40e-09,177;CL:0000037,3.62e-09,168;CL:0002032,1.73e-08,161;CL:0000837,1.73e-08,161 | |||
|ontology_enrichment_development_v019=CL:0000051;5.36e-10;53!CL:0000790;3.11e-09;18 | |||
|ontology_enrichment_disease=DOID:162!5.60e-16!235;DOID:14566!2.26e-14!239;DOID:0050687!4.12e-10!143;DOID:2531!1.71e-09!51;DOID:0060083!1.71e-09!51;DOID:0050686!4.12e-09!137;DOID:1240!4.06e-08!39;DOID:305!3.56e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:171;8.26e-07;10!DOID:1240;9.89e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.71e-16,235;DOID:14566,2.41e-14,239;DOID:0050687,4.10e-10,143;DOID:2531,1.68e-09,51;DOID:0060083,1.68e-09,51;DOID:0050686,4.20e-09,137;DOID:1240,4.05e-08,39;DOID:305,3.55e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.91e-13!94;UBERON:0001016!4.91e-13!94;UBERON:0001017!1.30e-12!82;UBERON:0005743!5.08e-12!86;UBERON:0002780!1.48e-10!41;UBERON:0001890!1.48e-10!41;UBERON:0006240!1.48e-10!41;UBERON:0000955!2.20e-10!69;UBERON:0006238!2.20e-10!69;UBERON:0001049!2.58e-10!57;UBERON:0005068!2.58e-10!57;UBERON:0006241!2.58e-10!57;UBERON:0007135!2.58e-10!57;UBERON:0003080!1.10e-09!42;UBERON:0002616!2.25e-09!59;UBERON:0001893!1.74e-08!34;UBERON:0002791!2.36e-08!33;UBERON:0001869!2.92e-08!32;UBERON:0002020!3.11e-08!34;UBERON:0003528!3.11e-08!34;UBERON:0002346!6.70e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.20e-08;41!UBERON:0001890;6.20e-08;41!UBERON:0002791;1.37e-07;32!UBERON:0001869;1.43e-07;32!UBERON:0001893;2.35e-07;34!UBERON:0003528;2.77e-07;34!UBERON:0002020;2.77e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.62e-14,89;UBERON:0001017,2.61e-13,81;UBERON:0001049,4.49e-11,56;UBERON:0005068,4.49e-11,56;UBERON:0006241,4.49e-11,56;UBERON:0007135,4.49e-11,56;UBERON:0000955,4.65e-11,68;UBERON:0006238,4.65e-11,68;UBERON:0000073,5.15e-11,53;UBERON:0002616,5.15e-11,53;UBERON:0002780,1.47e-10,41;UBERON:0001890,1.47e-10,41;UBERON:0003080,1.47e-10,41;UBERON:0006240,1.47e-10,41;UBERON:0001893,1.73e-08,34;UBERON:0001869,2.91e-08,32;UBERON:0003528,3.10e-08,34;UBERON:0002020,3.10e-08,34;UBERON:0002791,3.60e-08,32;UBERON:0002346,1.81e-07,86;UBERON:0003056,2.80e-07,61 | |||
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| |||
|short_description=p1@TIGD1 | |||
}} |
Latest revision as of 21:52, 15 September 2015
Short description: | p1@TIGD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TIGD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -21bp_to_ENST00000408957, NM_145702, uc002vsy.1_5end |
EntrezGene: | TIGD1 |
HGNC: | 14523 |
UniProt: | Q96MW7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 8.29e-16 | 53 |
common lymphoid progenitor | 8.29e-16 | 53 |
lymphoid lineage restricted progenitor cell | 2.24e-15 | 52 |
T cell | 4.27e-10 | 25 |
pro-T cell | 4.27e-10 | 25 |
mature alpha-beta T cell | 3.24e-09 | 18 |
alpha-beta T cell | 3.24e-09 | 18 |
immature T cell | 3.24e-09 | 18 |
mature T cell | 3.24e-09 | 18 |
immature alpha-beta T cell | 3.24e-09 | 18 |
hematopoietic cell | 3.40e-09 | 177 |
hematopoietic stem cell | 3.62e-09 | 168 |
hematopoietic oligopotent progenitor cell | 1.73e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.62e-14 | 89 |
central nervous system | 2.61e-13 | 81 |
neural tube | 4.49e-11 | 56 |
neural rod | 4.49e-11 | 56 |
future spinal cord | 4.49e-11 | 56 |
neural keel | 4.49e-11 | 56 |
brain | 4.65e-11 | 68 |
future brain | 4.65e-11 | 68 |
regional part of nervous system | 5.15e-11 | 53 |
regional part of brain | 5.15e-11 | 53 |
regional part of forebrain | 1.47e-10 | 41 |
forebrain | 1.47e-10 | 41 |
anterior neural tube | 1.47e-10 | 41 |
future forebrain | 1.47e-10 | 41 |
telencephalon | 1.73e-08 | 34 |
cerebral hemisphere | 2.91e-08 | 32 |
brain grey matter | 3.10e-08 | 34 |
gray matter | 3.10e-08 | 34 |
regional part of telencephalon | 3.60e-08 | 32 |
neurectoderm | 1.81e-07 | 86 |
pre-chordal neural plate | 2.80e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.71e-16 | 235 |
disease of cellular proliferation | 2.41e-14 | 239 |
cell type cancer | 4.10e-10 | 143 |
hematologic cancer | 1.68e-09 | 51 |
immune system cancer | 1.68e-09 | 51 |
organ system cancer | 4.20e-09 | 137 |
leukemia | 4.05e-08 | 39 |
carcinoma | 3.55e-07 | 106 |