FFCP PHASE1:Hg19::chr2:25432921..25432925,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:25432921..25432925,- | |||
|coexpression_cluster_id=C1900 | |||
|description=CAGE_peak_at_chr2:25432921..25432925,- | |||
|id=chr2:25432921..25432925,- | |||
|ontology_enrichment_celltype=CL:0002274!2.79e-34!5;CL:0000457!2.79e-34!5;CL:0002191!2.79e-34!5;CL:0000097!2.79e-34!5;CL:0000831!2.79e-34!5;CL:0002028!2.79e-34!5;CL:0001014!1.34e-22!2;CL:0001016!1.34e-22!2;CL:0000163!3.33e-19!9;CL:0000037!3.02e-17!172;CL:0000566!3.02e-17!172;CL:0000988!3.59e-16!182;CL:0002032!6.88e-16!165;CL:0000837!6.88e-16!165;CL:0002031!2.71e-12!124;CL:0001024!5.05e-12!1;CL:0002127!1.32e-11!1;CL:0000914!1.32e-11!1;CL:0000911!1.32e-11!1;CL:0000814!1.32e-11!1;CL:0002042!1.32e-11!1;CL:0002039!1.32e-11!1;CL:0002040!1.32e-11!1;CL:0002041!1.32e-11!1;CL:0000945!8.53e-11!24;CL:0000826!8.53e-11!24;CL:0000738!1.12e-10!140;CL:0000453!1.31e-09!5;CL:0000838!3.96e-09!52;CL:0000542!6.07e-09!53;CL:0000051!6.07e-09!53;CL:0000840!3.77e-08!5;CL:0001029!3.77e-08!5;CL:0000763!5.99e-08!112;CL:0000049!5.99e-08!112;CL:0000134!5.55e-07!358;CL:0002320!8.51e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0001014;2.86e-79;2!CL:0001016;2.86e-79;2!CL:0000453;1.57e-32;5!CL:0000097;1.57e-32;5!CL:0000840;2.54e-27;5!CL:0000163;1.29e-18;9!CL:0000990;1.29e-18;8!CL:0000451;1.95e-15;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.22e-79,2;CL:0001016,5.22e-79,2;CL:0000097,1.23e-32,5;CL:0002028,1.23e-32,5;CL:0000453,1.99e-32,5;CL:0000840,3.11e-27,5;CL:0001029,3.11e-27,5;CL:0000163,1.13e-18,9;CL:0000990,1.48e-18,8;CL:0000451,2.17e-15,10;CL:0000557,5.22e-10,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.50e-09,76;UBERON:0001474,2.59e-08,82;UBERON:0004765,1.24e-07,90;UBERON:0002405,2.08e-07,93;UBERON:0002390,4.61e-07,98;UBERON:0003061,4.61e-07,98;UBERON:0001434,6.20e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.472264687882075,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,3.10992173311158,0.864719720501769,1.51490920111656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:25432921..25432925,- | |||
}} |
Latest revision as of 08:54, 29 July 2015
Short description: | p@chr2:25432921..25432925, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:25432921..25432925, - |
Coexpression cluster: | C1900_Mast_cord_immature_CD14_CD34_chronic_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.22e-79 | 2 |
immature CD1a-positive Langerhans cell | 5.22e-79 | 2 |
mast cell | 1.23e-32 | 5 |
basophil mast progenitor cell | 1.23e-32 | 5 |
Langerhans cell | 1.99e-32 | 5 |
immature conventional dendritic cell | 3.11e-27 | 5 |
common dendritic progenitor | 3.11e-27 | 5 |
endocrine cell | 1.13e-18 | 9 |
conventional dendritic cell | 1.48e-18 | 8 |
dendritic cell | 2.17e-15 | 10 |
granulocyte monocyte progenitor cell | 5.22e-10 | 67 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.50e-09 | 76 |
bone element | 2.59e-08 | 82 |
skeletal element | 1.24e-07 | 90 |
immune system | 2.08e-07 | 93 |
hematopoietic system | 4.61e-07 | 98 |
blood island | 4.61e-07 | 98 |
skeletal system | 6.20e-07 | 100 |