FFCP PHASE1:Hg19::chr2:27886408..27886419,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9913 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30632 | |||
|TSSclassifier=strong | |||
|UniProt=O94864 | |||
|association_with_transcript=24bp_to_uc002rlh.1_5end | |||
|cluster_id=chr2:27886408..27886419,- | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_4_at_SUPT7L_5end | |||
|id=chr2:27886408..27886419,- | |||
|ontology_enrichment_celltype=CL:0000221!2.49e-07!71 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,6.27e-08,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.01e-12!94;UBERON:0001016!1.01e-12!94;UBERON:0001017!1.47e-12!82;UBERON:0005743!9.02e-12!86;UBERON:0001049!1.33e-11!57;UBERON:0005068!1.33e-11!57;UBERON:0006241!1.33e-11!57;UBERON:0007135!1.33e-11!57;UBERON:0000955!6.09e-11!69;UBERON:0006238!6.09e-11!69;UBERON:0002619!1.14e-10!22;UBERON:0001950!4.94e-10!20;UBERON:0000956!8.80e-10!25;UBERON:0000203!8.80e-10!25;UBERON:0002616!1.68e-09!59;UBERON:0003075!1.67e-08!86;UBERON:0007284!1.67e-08!86;UBERON:0001869!1.99e-08!32;UBERON:0002346!2.53e-08!90;UBERON:0003080!3.27e-08!42;UBERON:0002780!3.72e-08!41;UBERON:0001890!3.72e-08!41;UBERON:0006240!3.72e-08!41;UBERON:0001893!6.18e-08!34;UBERON:0004121!6.64e-08!169;UBERON:0000924!7.33e-08!173;UBERON:0006601!7.33e-08!173;UBERON:0002020!1.17e-07!34;UBERON:0003528!1.17e-07!34;UBERON:0002791!1.81e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.45e-10;22!UBERON:0001950;1.90e-09;20!UBERON:0000956;2.90e-09;25!UBERON:0000203;2.90e-09;25!UBERON:0001869;5.80e-08;32!UBERON:0001893;3.04e-07;34!UBERON:0003528;3.41e-07;34!UBERON:0002020;3.41e-07;34!UBERON:0002791;6.46e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.93e-14,89;UBERON:0001017,7.12e-13,81;UBERON:0001049,8.09e-12,56;UBERON:0005068,8.09e-12,56;UBERON:0006241,8.09e-12,56;UBERON:0007135,8.09e-12,56;UBERON:0010371,2.44e-11,104;UBERON:0000955,3.11e-11,68;UBERON:0006238,3.11e-11,68;UBERON:0000073,4.84e-11,53;UBERON:0002616,4.84e-11,53;UBERON:0002619,6.55e-11,22;UBERON:0001950,2.96e-10,20;UBERON:0000956,5.35e-10,25;UBERON:0000203,5.35e-10,25;UBERON:0001869,8.43e-09,32;UBERON:0003075,1.83e-08,82;UBERON:0007284,1.83e-08,82;UBERON:0002346,2.32e-08,86;UBERON:0002780,2.46e-08,41;UBERON:0001890,2.46e-08,41;UBERON:0003080,2.46e-08,41;UBERON:0006240,2.46e-08,41;UBERON:0004121,2.62e-08,171;UBERON:0000924,2.62e-08,171;UBERON:0006601,2.62e-08,171;UBERON:0001893,3.15e-08,34;UBERON:0003528,6.09e-08,34;UBERON:0002020,6.09e-08,34;UBERON:0002791,1.37e-07,32 | |||
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| |||
|short_description=p4@SUPT7L | |||
}} |
Latest revision as of 18:07, 16 September 2015
Short description: | p4@SUPT7L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SUPT7L_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 24bp_to_uc002rlh.1_5end |
EntrezGene: | SUPT7L |
HGNC: | 30632 |
UniProt: | O94864 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 6.27e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
nervous system | 7.93e-14 | 89 |
central nervous system | 7.12e-13 | 81 |
neural tube | 8.09e-12 | 56 |
neural rod | 8.09e-12 | 56 |
future spinal cord | 8.09e-12 | 56 |
neural keel | 8.09e-12 | 56 |
ecto-epithelium | 2.44e-11 | 104 |
brain | 3.11e-11 | 68 |
future brain | 3.11e-11 | 68 |
regional part of nervous system | 4.84e-11 | 53 |
regional part of brain | 4.84e-11 | 53 |
regional part of cerebral cortex | 6.55e-11 | 22 |
neocortex | 2.96e-10 | 20 |
cerebral cortex | 5.35e-10 | 25 |
pallium | 5.35e-10 | 25 |
cerebral hemisphere | 8.43e-09 | 32 |
neural plate | 1.83e-08 | 82 |
presumptive neural plate | 1.83e-08 | 82 |
neurectoderm | 2.32e-08 | 86 |
regional part of forebrain | 2.46e-08 | 41 |
forebrain | 2.46e-08 | 41 |
anterior neural tube | 2.46e-08 | 41 |
future forebrain | 2.46e-08 | 41 |
ectoderm-derived structure | 2.62e-08 | 171 |
ectoderm | 2.62e-08 | 171 |
presumptive ectoderm | 2.62e-08 | 171 |
telencephalon | 3.15e-08 | 34 |
brain grey matter | 6.09e-08 | 34 |
gray matter | 6.09e-08 | 34 |
regional part of telencephalon | 1.37e-07 | 32 |