FFCP PHASE1:Hg19::chr2:56411131..56411187,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114800 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29400 | |||
|TSSclassifier=strong | |||
|UniProt=Q96PX6 | |||
|association_with_transcript=-70bp_to_ENST00000407595,NM_001080433,uc002rzn.2_5end | |||
|cluster_id=chr2:56411131..56411187,+ | |||
|coexpression_cluster_id=C4238 | |||
|description=CAGE_peak_1_at_CCDC85A_5end | |||
|id=chr2:56411131..56411187,+ | |||
|ontology_enrichment_celltype=CL:0000222!3.53e-10!119;CL:0000359!1.48e-07!32;CL:0000192!4.72e-07!42;CL:0000514!4.72e-07!42;CL:0002139!5.18e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.29e-08;24!CL:0000071;9.00e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.66e-08,24;CL:0000222,2.03e-07,121;CL:0000115,3.83e-07,36;CL:0000071,7.57e-07,18;CL:0002546,7.57e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.57e-07;82!CL:0002546;9.00e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.72e-32!115;UBERON:0000025!2.76e-24!194;UBERON:0001049!1.01e-22!57;UBERON:0005068!1.01e-22!57;UBERON:0006241!1.01e-22!57;UBERON:0007135!1.01e-22!57;UBERON:0004111!1.37e-20!241;UBERON:0003075!5.21e-20!86;UBERON:0007284!5.21e-20!86;UBERON:0000955!1.82e-18!69;UBERON:0006238!1.82e-18!69;UBERON:0000477!3.15e-18!286;UBERON:0003080!3.39e-18!42;UBERON:0005743!6.62e-18!86;UBERON:0002616!7.39e-18!59;UBERON:0002346!7.63e-18!90;UBERON:0002780!1.71e-17!41;UBERON:0001890!1.71e-17!41;UBERON:0006240!1.71e-17!41;UBERON:0001017!4.73e-17!82;UBERON:0000483!8.00e-17!309;UBERON:0000073!1.18e-16!94;UBERON:0001016!1.18e-16!94;UBERON:0000475!3.69e-16!365;UBERON:0001981!3.71e-16!60;UBERON:0007500!3.71e-16!60;UBERON:0004537!3.71e-16!60;UBERON:0006965!3.71e-16!60;UBERON:0000119!4.14e-16!312;UBERON:0001893!4.49e-16!34;UBERON:0004872!4.60e-16!84;UBERON:0002020!5.43e-16!34;UBERON:0003528!5.43e-16!34;UBERON:0000055!1.42e-15!69;UBERON:0002791!1.95e-15!33;UBERON:0001869!5.20e-15!32;UBERON:0002619!8.77e-15!22;UBERON:0003056!2.84e-14!61;UBERON:0001950!1.40e-13!20;UBERON:0002049!5.41e-13!79;UBERON:0007798!5.41e-13!79;UBERON:0001637!8.49e-13!42;UBERON:0003509!8.49e-13!42;UBERON:0004572!8.49e-13!42;UBERON:0000468!8.51e-13!659;UBERON:0000956!9.61e-12!25;UBERON:0000203!9.61e-12!25;UBERON:0000481!3.57e-11!347;UBERON:0004573!7.42e-10!33;UBERON:0004571!7.42e-10!33;UBERON:0000153!9.61e-10!129;UBERON:0007811!9.61e-10!129;UBERON:0001009!1.05e-09!113;UBERON:0000033!1.52e-09!123;UBERON:0000467!3.70e-09!625;UBERON:0000480!5.17e-09!626;UBERON:0004535!8.68e-09!110;UBERON:0000064!4.53e-08!219;UBERON:0003914!1.04e-07!118;UBERON:0000947!1.04e-07!21;UBERON:0010191!1.04e-07!21;UBERON:0002385!3.98e-07!63;UBERON:0001015!3.98e-07!63;UBERON:0000383!3.98e-07!63;UBERON:0004121!6.80e-07!169;UBERON:0001134!7.32e-07!61;UBERON:0002036!7.32e-07!61;UBERON:0003082!7.32e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.33e-19;22!UBERON:0001893;2.06e-18;34!UBERON:0003528;5.35e-18;34!UBERON:0002020;5.35e-18;34!UBERON:0001869;6.77e-18;32!UBERON:0002791;9.63e-18;32!UBERON:0001950;2.06e-17;20!UBERON:0000956;1.12e-15;25!UBERON:0000203;1.12e-15;25!UBERON:0002780;7.59e-15;41!UBERON:0001890;7.59e-15;41!UBERON:0000073;6.30e-13;53!UBERON:0002616;6.30e-13;53!UBERON:0001017;1.22e-09;75!UBERON:0000955;5.81e-09;68!UBERON:0001637;8.44e-09;42!UBERON:0003509;8.44e-09;42!UBERON:0004572;8.44e-09;42!UBERON:0007023;1.18e-08;114!UBERON:0007500;2.46e-08;56!UBERON:0001981;2.46e-08;56!UBERON:0004537;2.46e-08;56!UBERON:0002420;1.58e-07;9!UBERON:0007245;1.58e-07;9!UBERON:0010009;1.58e-07;9!UBERON:0010011;1.58e-07;9!UBERON:0000454;1.58e-07;9!UBERON:0000947;1.72e-07;21!UBERON:0010191;1.72e-07;21!UBERON:0001016;2.15e-07;83!UBERON:0010260;2.41e-07;9!UBERON:0000125;3.38e-07;9!UBERON:0002308;3.38e-07;9!UBERON:0004573;5.28e-07;33!UBERON:0004571;5.28e-07;33!UBERON:0000200;5.48e-07;6!UBERON:0004638;9.00e-07;18!UBERON:0001986;9.00e-07;18!UBERON:0004852;9.00e-07;18!UBERON:0000055;9.42e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.82e-28,114;UBERON:0001049,6.06e-25,56;UBERON:0005068,6.06e-25,56;UBERON:0006241,6.06e-25,56;UBERON:0007135,6.06e-25,56;UBERON:0000025,1.30e-24,192;UBERON:0000073,3.03e-22,53;UBERON:0002616,3.03e-22,53;UBERON:0001893,1.52e-21,34;UBERON:0003528,1.97e-21,34;UBERON:0002020,1.97e-21,34;UBERON:0004111,5.71e-21,240;UBERON:0002780,3.53e-20,41;UBERON:0001890,3.53e-20,41;UBERON:0003080,3.53e-20,41;UBERON:0006240,3.53e-20,41;UBERON:0001869,3.83e-20,32;UBERON:0002791,5.94e-20,32;UBERON:0003075,6.79e-20,82;UBERON:0007284,6.79e-20,82;UBERON:0000955,9.70e-20,68;UBERON:0006238,9.70e-20,68;UBERON:0002619,3.95e-19,22;UBERON:0001017,2.28e-18,81;UBERON:0002346,4.50e-18,86;UBERON:0001950,1.49e-17,20;UBERON:0001016,1.11e-16,89;UBERON:0000956,7.46e-16,25;UBERON:0000203,7.46e-16,25;UBERON:0007500,1.72e-14,59;UBERON:0001981,1.72e-14,59;UBERON:0004537,1.72e-14,59;UBERON:0006965,1.72e-14,59;UBERON:0000055,2.17e-14,68;UBERON:0003056,4.18e-14,61;UBERON:0000483,8.22e-14,306;UBERON:0010314,8.60e-14,132;UBERON:0000119,2.47e-13,309;UBERON:0010371,1.86e-12,104;UBERON:0004872,9.41e-12,83;UBERON:0002049,2.65e-11,78;UBERON:0007798,2.65e-11,78;UBERON:0001637,3.35e-11,42;UBERON:0003509,3.35e-11,42;UBERON:0004572,3.35e-11,42;UBERON:0004573,4.44e-08,33;UBERON:0004571,4.44e-08,33;UBERON:0001009,6.91e-08,112;UBERON:0000947,1.42e-07,21;UBERON:0010191,1.42e-07,21;UBERON:0010260,1.76e-07,9;UBERON:0002420,2.05e-07,9;UBERON:0007245,2.05e-07,9;UBERON:0010009,2.05e-07,9;UBERON:0010011,2.05e-07,9;UBERON:0000454,2.05e-07,9;UBERON:0000125,4.81e-07,9;UBERON:0002308,4.81e-07,9;UBERON:0000200,5.22e-07,6;UBERON:0004535,6.38e-07,109;UBERON:0004638,7.57e-07,18;UBERON:0001986,7.57e-07,18;UBERON:0004852,7.57e-07,18 | |||
|phase1_expression=7.63049192936338,4.28201047781966,2.81908808191942,13.009528785907,5.81049422755474,5.23403114460221,0,0,0,0,1.39560233594486,0.218441372130172,0,1.8564952944007,4.97096063591874,3.36162573225888,0.602694528023977,3.65155045193687,4.39139518911456,0,1.63200552995402,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.50401373190767,1.44846518960824,0,0,0.0945348171640679,0,0.966182642624386,4.12584087817795,0,0,0,0.522389211897802,0.26591592103773,0,0,0,1.78886166630035,1.72046919021225,3.12426451446835,12.4367747223282,6.29249154314859,5.77747888074142,1.46296476575767,6.71883573840255,6.75955899104749,6.6944122552934,1.20848795132744,0,0.976248230192678,1.47065232138347,12.9622711661082,1.87529429396568,2.2452937262617,3.37834441449967,0,4.74632829784064,2.01521918323448,0,0,0,0.496971951695318,6.58478660655815,0.397227542439656,2.86836620748814,1.41867352879343,2.24271040056923,0,4.9333509683432,0.311211035399766,0.404132016209064,0.980771418680752,0,0,0,0,1.71141546463335,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0.877955241761676,0,0,0.567160915800105,7.35497506324334,2.34913127700424,1.27159140695737,5.40163972951924,1.64884046781502,4.63752972082133,3.90845398296339,7.08860595413318,5.16416127354353,3.78650661366172,1.47279837827679,5.01102776138317,2.13005755509969,2.51880245569101,1.3564847384839,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0.721879481669586,0.118306800039844,0,0.241011029883482,0.220587945464788,0,0,0.134831308160164,0.196221465125346,0,5.90524363699719,0,0.4115740113314,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,1.44331342025273,0,1.17408694235822,1.15493158208859,0,0.190254152234598,4.74122638775565,1.71697232418975,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,4.00742318849111,3.57656445851882,0,1.32969058292435,1.04007436911366,0.257207374262142,0,0.266422179016099,0.142977993658148,2.71310802695722,2.46972101034231,0,0,0,0.301439377059586,0,0.599837947092342,0,0,0,0.718874566474748,1.14861935834114,1.42636905040718,4.34343920002738,3.6985738059069,3.9393411912777,0,0,0,0,0,0,0,0,0,0,0,0,4.9076596687656,2.00068208423871,0.542530047399471,9.15071790735551,9.8135943838439,17.1895632386989,12.4169899892276,0,0,3.10419213877515,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,0.604780586659361,8.43566546583841,5.37116906508219,7.57782254969299,2.56278298511402,9.21073048320066,5.14732547659544,1.48418066444991,0.308419387605311,0,0.164254312027618,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,1.13733384070897,1.70093705276516,1.29549549661284,1.54227252690289,1.08378575017541,0,0,0,0,0,0,0.512900250232778,2.95213181129735,0.650756789328606,3.91555844261345,0,0.247528499761764,0,0,1.6068392984416,0,0.154048617114644,0,0,0.214840489736547,0.290033387828457,0.0852266274161009,0,0,0,0,0,4.64845549297286,3.77774816196768,1.3940745403212,0.924100740528266,3.19383618190213,0,0.9266210955196,5.72499546967965,0,0,1.5250415513906,0.255897791311334,0,0,0.78494864019923,0.899362287916574,3.84351841630477,2.12062324222236,3.03273722359974,3.17020642346017,0.421258456238981,0.48763373908959,0.731140468893853,2.11300293513511,0,0.282810863907425,0,1.10273068709225,2.65375590096488,3.94605796728386,0,0,12.3775329947249,8.0554109505935,3.66204283291914,4.7325746227337,4.91245205065606,8.56010523555001,0.354761064070598,0,0,0,0,0,0,0,4.70719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,2.50634477090067,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,8.35096621849796,0,0,0,0.23874448473769,0,0,6.95903353436409,13.6449333918197,0.111308705022906,0,0.422250816255987,3.18796781201712,0.828851746593443,1.0077309914171,0.102268682502155,0,1.24415835064723,0.0898683511473268,0.537063524026827,0,0.690503839458535,0,0,10.6626602070474,8.81296932537587,17.9652418201075,0,0,10.1499940560871,0,0,3.07303986298317,0.344743373241465,0,3.99337488346572,3.54296554325536,5.30624329951795,0,1.54810963903714,0.886642856860642,10.7498844605447,0,1.67308493134324,3.53971189117467,0.227884111694002,0,0,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.973033209536731,1.83309043480088,0,0.494255755786011,0.313265848516366,5.52689290441552,2.40773294189637,6.32514003458416,0,0,0,4.3404284313433,0,6.73360075587078,0.758238955541855,0,0,0,0,0,0,0,0.277349346026277,0,0,0,1.92199335066233,0,0,0,0,0.775912131907355,0,2.48578814858586,0,0,8.54695745404362,0.391102765469606,0,1.28071796843612,0,0,0.114536596165916,6.00582492516876,0.14405479798815,0.372757606696298,0,2.44627570932505,2.196659772559,0,0.866851769704557,1.20084057741958,4.38097212454378,0,0.859530882839914,0,1.39641200636127,5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|short_description=p1@CCDC85A | |||
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Latest revision as of 18:29, 17 September 2015
Short description: | p1@CCDC85A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCDC85A_5end |
Coexpression cluster: | C4238_brain_nonsmall_spinal_Olfactory_insula_frontal_temporal |
Association with transcript: | -70bp_to_ENST00000407595, NM_001080433, uc002rzn.2_5end |
EntrezGene: | CCDC85A |
HGNC: | 29400 |
UniProt: | Q96PX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.66e-08 | 24 |
mesodermal cell | 2.03e-07 | 121 |
endothelial cell | 3.83e-07 | 36 |
blood vessel endothelial cell | 7.57e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.57e-07 | 18 |