FFCP PHASE1:Mm9::chr11:31900418..31900445,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=18197|HGNC=|MCL_coexpression_id=13|UniProt=P47759,Q5SS02,Q5SS03|association_with_transcript=-13bp_to_NM_008741,uc007iiv.1,uc007iiw.1_5end|description=CAGE_peak_2_at_Nsg2_5end|id=chr11:31900418..31900445,+|ontology_enrichment_celltype=CL:0000540!1.20e-15!33;CL:0000047!1.20e-15!33;CL:0000031!1.20e-15!33;CL:0000404!1.20e-15!33;CL:0000117!4.82e-15!23;CL:0000337!4.82e-15!23;CL:0002319!8.77e-15!43;CL:0000221!9.12e-15!44;CL:0000133!9.12e-15!44;CL:0000393!1.02e-09!39;CL:0000211!1.02e-09!39;CL:0000055!3.98e-09!50|ontology_enrichment_celltype_v019_2=CL:0000540,2.36e-16,33;CL:0000047,2.36e-16,33;CL:0000031,2.36e-16,33;CL:0000404,2.36e-16,33;CL:0000117,1.01e-15,23;CL:0000337,1.01e-15,23;CL:0002319,3.90e-15,43;CL:0000221,4.04e-15,44;CL:0000133,4.04e-15,44;CL:0000393,6.18e-11,39;CL:0000211,6.18e-11,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.74e-31!73;UBERON:0005743!3.74e-31!73;UBERON:0000073!2.72e-30!75;UBERON:0001016!2.72e-30!75;UBERON:0002346!1.32e-26!71;UBERON:0003075!1.32e-26!71;UBERON:0007284!1.32e-26!71;UBERON:0004121!4.20e-26!102;UBERON:0000924!4.20e-26!102;UBERON:0006601!4.20e-26!102;UBERON:0001049!2.28e-24!52;UBERON:0005068!2.28e-24!52;UBERON:0006241!2.28e-24!52;UBERON:0007135!2.28e-24!52;UBERON:0000955!6.22e-23!50;UBERON:0006238!6.22e-23!50;UBERON:0007811!6.56e-23!86;UBERON:0000033!1.31e-22!63;UBERON:0002616!2.26e-22!49;UBERON:0000153!2.50e-22!94;UBERON:0003056!1.97e-20!49;UBERON:0002020!8.19e-20!34;UBERON:0003080!1.12e-19!40;UBERON:0002780!5.30e-19!39;UBERON:0001890!5.30e-19!39;UBERON:0006240!5.30e-19!39;UBERON:0002791!1.30e-16!29;UBERON:0003528!1.30e-16!29;UBERON:0001893!1.30e-16!29;UBERON:0000956!2.51e-11!21;UBERON:0001869!2.51e-11!21;UBERON:0000203!2.51e-11!21;UBERON:0002619!2.23e-09!17;UBERON:0002021!7.85e-07!10;UBERON:0000411!7.85e-07!10;UBERON:0001950!7.85e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.20e-32,73;UBERON:0001016,2.25e-31,75;UBERON:0002346,1.44e-27,64;UBERON:0003075,1.44e-27,64;UBERON:0007284,1.44e-27,64;UBERON:0000073,5.66e-27,54;UBERON:0001049,1.62e-25,52;UBERON:0005068,1.62e-25,52;UBERON:0006241,1.62e-25,52;UBERON:0007135,1.62e-25,52;UBERON:0004121,1.66e-25,95;UBERON:0000924,1.66e-25,95;UBERON:0006601,1.66e-25,95;UBERON:0000955,4.64e-22,47;UBERON:0006238,4.64e-22,47;UBERON:0010371,9.91e-22,73;UBERON:0002616,1.75e-21,46;UBERON:0003056,2.22e-21,49;UBERON:0002020,9.91e-21,34;UBERON:0003080,1.38e-20,40;UBERON:0002780,7.05e-20,39;UBERON:0001890,7.05e-20,39;UBERON:0006240,7.05e-20,39;UBERON:0003528,2.28e-17,29;UBERON:0002791,2.28e-17,29;UBERON:0001893,2.28e-17,29;UBERON:0010314,2.36e-15,92;UBERON:0000956,8.14e-12,21;UBERON:0001869,8.14e-12,21;UBERON:0000203,8.14e-12,21;UBERON:0002619,9.02e-10,17;UBERON:0002021,4.26e-07,10;UBERON:0000411,4.26e-07,10;UBERON:0001950,4.26e-07,10;UBERON:0002420,7.38e-07,8;UBERON:0007245,7.38e-07,8;UBERON:0010009,7.38e-07,8;UBERON:0010011,7.38e-07,8;UBERON:0000454,7.38e-07,8|phase1_expression=4.48416771893423,0,0,0,0,0,0.233612640595526,1.80772652818207,6.05391505252167,1.87251621057595,1.71217968225505,0,70.1922992717944,18.5331253128274,0,1.01237633694913,0,6.78243655520211,6.44437837946972,2.54633791078818,19.2197835741418,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,13.5175596955877,10.9843091367236,15.9432517240912,5.03951117851305,18.6878333674463,0.167782606057736,64.5572306390096,67.8909474267777,0,0,0,210.004486372263,381.931487034408,325.789341402176,0.338844532069132,0,0.449949858640699,0,0,12.8828047522914,19.5951335713993,66.0502830405003,91.9390440038813,72.141461743524,140.540284326671,166.755748418468,145.519069467365,136.004723374877,214.177977280135,181.691203648991,130.624146861147,133.637683932932,255.199966757925,286.630787406349,245.871110902791,127.865813542632,200.343489171278,158.146186448998,187.089151775779,161.87660106858,175.401878521608,0.681535739998656,2.64500460373749,0,0,0,1.07940638327563,0,0,4.91555470461132,0,0,0,5.7745802108439,0,0,0,0,0.253359865475099,0,4.33898742932428,31.3314839213078,10.2425075954729,6.41895709034703,17.0500667854799,8.99400439298628,13.2635923686308,9.99504010653491,4.64966387919799,0,0.722996784599558,0,0.808834249737046,0.441683036920787,0.969750506270444,5.59175283654366,19.3235326027621,17.8029700791437,0.510914110417183,0,0.599902730993408,0,176.153791940071,230.580303820588,245.025986620086,170.347833788431,138.342062415709,162.490250845576,188.84883021087,0.611036183101898,0.248813941220186,0,4.8401626853889,3.12289063110489,15.6333431014762,20.3470206680045,20.0437407721501,19.5945117555824,26.3914263786791,21.2702914750584,24.8355235909455,1.07783996466421,2.08016688184601,3.34307135911503,3.28793598641362,3.05851974148158,3.1342694986995,1.4404749548556,1.19420560091096,0,0,0,0.621377317606506,0.703578179943289,0,0.23674473558521,0,1.07986979021165,0.697601834251224,0.804820204198858,0.700592054203017,1.48103864922132,1.31333971263276,0.243206428637567,0.730999937126662,0.658650345873152,0.805238512562231,116.500631504526,122.765202568486,0,0.793351699990633,1.91959425481711,4.87697010906921,3.47942145569652,2.42020229548011,4.00280478920767,3.23383564391351,0.474529061544512,3.45867804920423,3.77002813200404,2.98434708061726,3.8992817423824,1.79763881730844,0.864552199498777,2.38969527905241,3.03468641524931,2.62771579002376,5.63538678365402,3.86937522906097,3.10323979468201,3.43665517462561,5.50157872981038,3.09981310757165,2.04098346193787,1.72756029490521,0.296452627087149,0,0,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,1.84753190166605,1.51593129416388,0.325929952884052,1.01847051465113,0,0.837531287209079,0.238043640886014,0.780534591431195,1.26108115284953,0.221464689648775,0.637819074629948,1.47476983244164,1.38147985492716,0.578596234326046,0,0,0.491764273019036,1.37968373152366,89.5872292131879,80.758852062028,0,0.504941854408746,23.0321000173867,23.4263246577983,43.7309497397582,5.01834475700359,10.4715376818725,8.20921939287614,12.5491317519217,25.4262596382841,27.6701444562566,125.957956037348,1.13552068166615,1.95872164033981,1.95464351224291,2.8044920905331,0,2.42780636154981,2.11626489875326,0.377210159511796,0.295301892880773,0.922305443831782,1.03371317267288,0,1.78248689192361,3.16036757935816,0,0,52.0872596803296,12.4242154881604,13.194585745841,18.2186479776853,20.5714671025037,23.9014215586775,23.6950589667054,24.0527309800533,0,0,1.98475558249466,0.16488625294148,0.484393280087717,0.180938774784468,0,0.164140899745061,2.62332752966866,71.9450171800778,3.58828849675491,1.44470807574256,0,0.188368457004691,2.7338845544205,2.28778173206523,1.35982743995084,1.11961161858926,0.967399816630967,0,2.37251995185852,3.86306987541013,2.37611749807963,1.67270636811575,1.74690050996942,4.31565908431426,3.63675205191478,1.30877970992015,1.94422459937689,1.24267862617385,0,0.299033092087958,0.165458490457098,0.388902376688095,0.129159823477731,0.168956125490778,0.117357238645754,1.0416350787516,0.314578033277133,0,0.288030006257865,43.9255457673168,1.21635129174099,4.00572732942826,10.0039033692902,18.2607229580831,21.0602236068141,22.3563536107142,26.8794939457731,30.4918678843406,32.9213404749599,37.305688500631,41.1272256721755,39.9279142807367,45.6988687529935,0.226730383615211,0,0.0897138566094757,0,3.86379188064381,0.563047426353546,2.01466786693992,0.643105137237198,1.00314420807073,170.555056470354,155.129604702919,150.671520034561,141.778875433542,126.740266157569,124.639993069301,137.029567547057,145.003427438199,145.911855692914,133.58216043197,7.68026372122907,24.3405172774629,26.9759097091532,24.0675649897611,19.7036372870303,25.1865606576519,31.3367886200277,32.7595741009842,33.6965170071406,29.8182709881281,32.9523089857312,27.162193159595,25.0022824944586,22.2807530368945,21.538300858355,21.9095097990214,28.3916598564896,27.3931093058461,24.7251540481984,32.8253591899706,30.515363462302,27.5087499546973,29.5660875534678,28.6332440765687,27.1035015596152,28.1766644279283,28.5367637681525,31.831435083979,26.3459980860972,20.7622640513363,27.1674191504359,26.1036878295243,23.3261694606723,24.1701472250107,22.5700734847935,68.9477195108731,23.3931608445408,18.9086527562503,10.9034349279241,8.16188250742207,3.94175320554716|short_description=p2@Nsg2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18197 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=P47759,Q5SS02,Q5SS03 | |||
|association_with_transcript=-13bp_to_NM_008741,uc007iiv.1,uc007iiw.1_5end | |||
|cluster_id=chr11:31900418..31900445,+ | |||
|description=CAGE_peak_2_at_Nsg2_5end | |||
|id=chr11:31900418..31900445,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.20e-15!33;CL:0000047!1.20e-15!33;CL:0000031!1.20e-15!33;CL:0000404!1.20e-15!33;CL:0000117!4.82e-15!23;CL:0000337!4.82e-15!23;CL:0002319!8.77e-15!43;CL:0000221!9.12e-15!44;CL:0000133!9.12e-15!44;CL:0000393!1.02e-09!39;CL:0000211!1.02e-09!39;CL:0000055!3.98e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.36e-16,33;CL:0000047,2.36e-16,33;CL:0000031,2.36e-16,33;CL:0000404,2.36e-16,33;CL:0000117,1.01e-15,23;CL:0000337,1.01e-15,23;CL:0002319,3.90e-15,43;CL:0000221,4.04e-15,44;CL:0000133,4.04e-15,44;CL:0000393,6.18e-11,39;CL:0000211,6.18e-11,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.74e-31!73;UBERON:0005743!3.74e-31!73;UBERON:0000073!2.72e-30!75;UBERON:0001016!2.72e-30!75;UBERON:0002346!1.32e-26!71;UBERON:0003075!1.32e-26!71;UBERON:0007284!1.32e-26!71;UBERON:0004121!4.20e-26!102;UBERON:0000924!4.20e-26!102;UBERON:0006601!4.20e-26!102;UBERON:0001049!2.28e-24!52;UBERON:0005068!2.28e-24!52;UBERON:0006241!2.28e-24!52;UBERON:0007135!2.28e-24!52;UBERON:0000955!6.22e-23!50;UBERON:0006238!6.22e-23!50;UBERON:0007811!6.56e-23!86;UBERON:0000033!1.31e-22!63;UBERON:0002616!2.26e-22!49;UBERON:0000153!2.50e-22!94;UBERON:0003056!1.97e-20!49;UBERON:0002020!8.19e-20!34;UBERON:0003080!1.12e-19!40;UBERON:0002780!5.30e-19!39;UBERON:0001890!5.30e-19!39;UBERON:0006240!5.30e-19!39;UBERON:0002791!1.30e-16!29;UBERON:0003528!1.30e-16!29;UBERON:0001893!1.30e-16!29;UBERON:0000956!2.51e-11!21;UBERON:0001869!2.51e-11!21;UBERON:0000203!2.51e-11!21;UBERON:0002619!2.23e-09!17;UBERON:0002021!7.85e-07!10;UBERON:0000411!7.85e-07!10;UBERON:0001950!7.85e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.20e-32,73;UBERON:0001016,2.25e-31,75;UBERON:0002346,1.44e-27,64;UBERON:0003075,1.44e-27,64;UBERON:0007284,1.44e-27,64;UBERON:0000073,5.66e-27,54;UBERON:0001049,1.62e-25,52;UBERON:0005068,1.62e-25,52;UBERON:0006241,1.62e-25,52;UBERON:0007135,1.62e-25,52;UBERON:0004121,1.66e-25,95;UBERON:0000924,1.66e-25,95;UBERON:0006601,1.66e-25,95;UBERON:0000955,4.64e-22,47;UBERON:0006238,4.64e-22,47;UBERON:0010371,9.91e-22,73;UBERON:0002616,1.75e-21,46;UBERON:0003056,2.22e-21,49;UBERON:0002020,9.91e-21,34;UBERON:0003080,1.38e-20,40;UBERON:0002780,7.05e-20,39;UBERON:0001890,7.05e-20,39;UBERON:0006240,7.05e-20,39;UBERON:0003528,2.28e-17,29;UBERON:0002791,2.28e-17,29;UBERON:0001893,2.28e-17,29;UBERON:0010314,2.36e-15,92;UBERON:0000956,8.14e-12,21;UBERON:0001869,8.14e-12,21;UBERON:0000203,8.14e-12,21;UBERON:0002619,9.02e-10,17;UBERON:0002021,4.26e-07,10;UBERON:0000411,4.26e-07,10;UBERON:0001950,4.26e-07,10;UBERON:0002420,7.38e-07,8;UBERON:0007245,7.38e-07,8;UBERON:0010009,7.38e-07,8;UBERON:0010011,7.38e-07,8;UBERON:0000454,7.38e-07,8 | |||
|phase1_expression=4.48416771893423,0,0,0,0,0,0.233612640595526,1.80772652818207,6.05391505252167,1.87251621057595,1.71217968225505,0,70.1922992717944,18.5331253128274,0,1.01237633694913,0,6.78243655520211,6.44437837946972,2.54633791078818,19.2197835741418,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,13.5175596955877,10.9843091367236,15.9432517240912,5.03951117851305,18.6878333674463,0.167782606057736,64.5572306390096,67.8909474267777,0,0,0,210.004486372263,381.931487034408,325.789341402176,0.338844532069132,0,0.449949858640699,0,0,12.8828047522914,19.5951335713993,66.0502830405003,91.9390440038813,72.141461743524,140.540284326671,166.755748418468,145.519069467365,136.004723374877,214.177977280135,181.691203648991,130.624146861147,133.637683932932,255.199966757925,286.630787406349,245.871110902791,127.865813542632,200.343489171278,158.146186448998,187.089151775779,161.87660106858,175.401878521608,0.681535739998656,2.64500460373749,0,0,0,1.07940638327563,0,0,4.91555470461132,0,0,0,5.7745802108439,0,0,0,0,0.253359865475099,0,4.33898742932428,31.3314839213078,10.2425075954729,6.41895709034703,17.0500667854799,8.99400439298628,13.2635923686308,9.99504010653491,4.64966387919799,0,0.722996784599558,0,0.808834249737046,0.441683036920787,0.969750506270444,5.59175283654366,19.3235326027621,17.8029700791437,0.510914110417183,0,0.599902730993408,0,176.153791940071,230.580303820588,245.025986620086,170.347833788431,138.342062415709,162.490250845576,188.84883021087,0.611036183101898,0.248813941220186,0,4.8401626853889,3.12289063110489,15.6333431014762,20.3470206680045,20.0437407721501,19.5945117555824,26.3914263786791,21.2702914750584,24.8355235909455,1.07783996466421,2.08016688184601,3.34307135911503,3.28793598641362,3.05851974148158,3.1342694986995,1.4404749548556,1.19420560091096,0,0,0,0.621377317606506,0.703578179943289,0,0.23674473558521,0,1.07986979021165,0.697601834251224,0.804820204198858,0.700592054203017,1.48103864922132,1.31333971263276,0.243206428637567,0.730999937126662,0.658650345873152,0.805238512562231,116.500631504526,122.765202568486,0,0.793351699990633,1.91959425481711,4.87697010906921,3.47942145569652,2.42020229548011,4.00280478920767,3.23383564391351,0.474529061544512,3.45867804920423,3.77002813200404,2.98434708061726,3.8992817423824,1.79763881730844,0.864552199498777,2.38969527905241,3.03468641524931,2.62771579002376,5.63538678365402,3.86937522906097,3.10323979468201,3.43665517462561,5.50157872981038,3.09981310757165,2.04098346193787,1.72756029490521,0.296452627087149,0,0,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,1.84753190166605,1.51593129416388,0.325929952884052,1.01847051465113,0,0.837531287209079,0.238043640886014,0.780534591431195,1.26108115284953,0.221464689648775,0.637819074629948,1.47476983244164,1.38147985492716,0.578596234326046,0,0,0.491764273019036,1.37968373152366,89.5872292131879,80.758852062028,0,0.504941854408746,23.0321000173867,23.4263246577983,43.7309497397582,5.01834475700359,10.4715376818725,8.20921939287614,12.5491317519217,25.4262596382841,27.6701444562566,125.957956037348,1.13552068166615,1.95872164033981,1.95464351224291,2.8044920905331,0,2.42780636154981,2.11626489875326,0.377210159511796,0.295301892880773,0.922305443831782,1.03371317267288,0,1.78248689192361,3.16036757935816,0,0,52.0872596803296,12.4242154881604,13.194585745841,18.2186479776853,20.5714671025037,23.9014215586775,23.6950589667054,24.0527309800533,0,0,1.98475558249466,0.16488625294148,0.484393280087717,0.180938774784468,0,0.164140899745061,2.62332752966866,71.9450171800778,3.58828849675491,1.44470807574256,0,0.188368457004691,2.7338845544205,2.28778173206523,1.35982743995084,1.11961161858926,0.967399816630967,0,2.37251995185852,3.86306987541013,2.37611749807963,1.67270636811575,1.74690050996942,4.31565908431426,3.63675205191478,1.30877970992015,1.94422459937689,1.24267862617385,0,0.299033092087958,0.165458490457098,0.388902376688095,0.129159823477731,0.168956125490778,0.117357238645754,1.0416350787516,0.314578033277133,0,0.288030006257865,43.9255457673168,1.21635129174099,4.00572732942826,10.0039033692902,18.2607229580831,21.0602236068141,22.3563536107142,26.8794939457731,30.4918678843406,32.9213404749599,37.305688500631,41.1272256721755,39.9279142807367,45.6988687529935,0.226730383615211,0,0.0897138566094757,0,3.86379188064381,0.563047426353546,2.01466786693992,0.643105137237198,1.00314420807073,170.555056470354,155.129604702919,150.671520034561,141.778875433542,126.740266157569,124.639993069301,137.029567547057,145.003427438199,145.911855692914,133.58216043197,7.68026372122907,24.3405172774629,26.9759097091532,24.0675649897611,19.7036372870303,25.1865606576519,31.3367886200277,32.7595741009842,33.6965170071406,29.8182709881281,32.9523089857312,27.162193159595,25.0022824944586,22.2807530368945,21.538300858355,21.9095097990214,28.3916598564896,27.3931093058461,24.7251540481984,32.8253591899706,30.515363462302,27.5087499546973,29.5660875534678,28.6332440765687,27.1035015596152,28.1766644279283,28.5367637681525,31.831435083979,26.3459980860972,20.7622640513363,27.1674191504359,26.1036878295243,23.3261694606723,24.1701472250107,22.5700734847935,68.9477195108731,23.3931608445408,18.9086527562503,10.9034349279241,8.16188250742207,3.94175320554716 | |||
|short_description=p2@Nsg2 | |||
}} |
Latest revision as of 07:07, 27 September 2015
Short description: | p2@Nsg2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nsg2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -13bp_to_NM_008741, uc007iiv.1, uc007iiw.1_5end |
EntrezGene: | Nsg2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.36e-16 | 33 |
neuronal stem cell | 2.36e-16 | 33 |
neuroblast | 2.36e-16 | 33 |
electrically signaling cell | 2.36e-16 | 33 |
CNS neuron (sensu Vertebrata) | 1.01e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.01e-15 | 23 |
neural cell | 3.90e-15 | 43 |
ectodermal cell | 4.04e-15 | 44 |
neurectodermal cell | 4.04e-15 | 44 |
electrically responsive cell | 6.18e-11 | 39 |
electrically active cell | 6.18e-11 | 39 |