FFCP PHASE1:Hg19::chr9:33817090..33817101,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:33817090..33817101,+
|short_description=p6@UBE2R2
|description=CAGE_peak_6_at_UBE2R2_5end
|association_with_transcript=-80bp_to_NM_017811,uc003ztm.2_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54926 | |EntrezGene=54926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19907 | |HGNC=19907 | ||
|TSSclassifier=strong | |||
|UniProt=Q712K3 | |UniProt=Q712K3 | ||
|association_with_transcript=-80bp_to_NM_017811,uc003ztm.2_5end | |||
|cluster_id=chr9:33817090..33817101,+ | |||
|description=CAGE_peak_6_at_UBE2R2_5end | |||
|id=chr9:33817090..33817101,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.85e-09!42;CL:0000860!7.10e-09!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.27e-10;33!CL:0002057;1.27e-10;33!CL:0000473;7.58e-07;39!CL:0000234;7.58e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.21e-09,42;CL:0002057,1.21e-09,42;CL:0000473,2.15e-07,48;CL:0000234,2.15e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002057;6.69e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.37e-09!57;UBERON:0005068!6.37e-09!57;UBERON:0006241!6.37e-09!57;UBERON:0007135!6.37e-09!57;UBERON:0003075!8.09e-09!86;UBERON:0007284!8.09e-09!86;UBERON:0002346!3.90e-08!90;UBERON:0002616!2.33e-07!59;UBERON:0003056!2.56e-07!61;UBERON:0000073!6.18e-07!94;UBERON:0001016!6.18e-07!94;UBERON:0000955!6.72e-07!69;UBERON:0006238!6.72e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.05e-08,56;UBERON:0005068,1.05e-08,56;UBERON:0006241,1.05e-08,56;UBERON:0007135,1.05e-08,56;UBERON:0003075,2.36e-08,82;UBERON:0007284,2.36e-08,82;UBERON:0000073,6.49e-08,53;UBERON:0002616,6.49e-08,53;UBERON:0002346,1.64e-07,86;UBERON:0010371,2.36e-07,104 | |||
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| ||
|short_description=p6@UBE2R2 | |||
}} | }} |
Latest revision as of 04:33, 17 September 2015
Short description: | p6@UBE2R2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_UBE2R2_5end |
Coexpression cluster: | NA |
Association with transcript: | -80bp_to_NM_017811, uc003ztm.2_5end |
EntrezGene: | UBE2R2 |
HGNC: | 19907 |
UniProt: | Q712K3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.21e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.21e-09 | 42 |
defensive cell | 2.15e-07 | 48 |
phagocyte | 2.15e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.05e-08 | 56 |
neural rod | 1.05e-08 | 56 |
future spinal cord | 1.05e-08 | 56 |
neural keel | 1.05e-08 | 56 |
neural plate | 2.36e-08 | 82 |
presumptive neural plate | 2.36e-08 | 82 |
regional part of nervous system | 6.49e-08 | 53 |
regional part of brain | 6.49e-08 | 53 |
neurectoderm | 1.64e-07 | 86 |
ecto-epithelium | 2.36e-07 | 104 |