FFCP PHASE1:Mm9::chr11:6420867..6420869,-: Difference between revisions
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{{FFCP|EntrezGene=246177|HGNC=|UniProt=D6RHL4|association_with_transcript=30bp_to_ENSMUST00000144725_5end|description=CAGE_peak_3_at_Myo1g_5end|id=chr11:6420867..6420869,-|ontology_enrichment_celltype=CL:0000988!6.51e-09!32;CL:0002032!6.51e-09!32;CL:0000037!6.51e-09!32;CL:0000566!6.51e-09!32;CL:0000837!6.51e-09!32;CL:0000838!1.41e-07!12;CL:0000084!6.92e-07!11;CL:0000827!6.92e-07!11;CL:0000542!8.64e-07!13;CL:0000051!8.64e-07!13|ontology_enrichment_celltype_v019_2=CL:0000553,6.44e-11,6;CL:0000556,6.44e-11,6;CL:0000050,1.87e-07,9;CL:0000355,1.87e-07,9;CL:0000763,3.48e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,3.34e-21,3;DOID:4045,3.34e-21,3;DOID:0050686,6.44e-11,6|ontology_enrichment_uberon=UBERON:0002193!5.75e-20!48;UBERON:0002390!1.37e-17!45;UBERON:0003061!1.37e-17!45;UBERON:0004177!9.30e-15!29;UBERON:0000065!4.02e-14!41;UBERON:0001004!1.44e-13!42;UBERON:0002405!2.09e-13!70;UBERON:0003081!5.57e-10!88;UBERON:0003104!2.18e-09!131;UBERON:0009142!2.18e-09!131;UBERON:0002370!2.54e-09!23;UBERON:0000974!2.54e-09!23;UBERON:0004807!2.54e-09!23;UBERON:0005058!2.54e-09!23;UBERON:0003351!2.54e-09!23;UBERON:0009113!2.54e-09!23;UBERON:0003295!2.54e-09!23;UBERON:0009722!2.54e-09!23;UBERON:0005562!2.54e-09!23;UBERON:0007690!2.54e-09!23;UBERON:0000926!9.08e-09!193;UBERON:0004120!9.08e-09!193;UBERON:0006603!9.08e-09!193;UBERON:0006562!1.00e-08!24;UBERON:0003408!1.00e-08!24;UBERON:0001557!1.00e-08!24;UBERON:0001042!1.00e-08!24;UBERON:0008814!1.00e-08!24;UBERON:0009145!1.00e-08!24;UBERON:0002048!1.72e-08!14;UBERON:0000117!1.72e-08!14;UBERON:0000171!1.72e-08!14;UBERON:0000170!1.72e-08!14;UBERON:0005597!1.72e-08!14;UBERON:0000118!1.72e-08!14;UBERON:0001041!3.62e-08!92;UBERON:0005057!3.93e-08!51;UBERON:0002106!1.38e-07!6;UBERON:0004457!1.38e-07!6;UBERON:0000042!1.38e-07!6;UBERON:0004854!1.38e-07!6;UBERON:0009034!1.38e-07!6;UBERON:0002095!1.38e-07!6;UBERON:0004782!1.38e-07!6;UBERON:0003281!1.38e-07!6;UBERON:0009664!1.38e-07!6;UBERON:0002296!1.38e-07!6;UBERON:0005602!1.38e-07!6;UBERON:0001179!1.38e-07!6;UBERON:0006293!1.38e-07!6;UBERON:0005911!2.34e-07!69;UBERON:0000072!3.18e-07!27;UBERON:0000077!3.47e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.32e-10,48;UBERON:0002405,1.32e-10,48;UBERON:0002106,1.61e-10,6;UBERON:0004457,1.61e-10,6;UBERON:0000042,1.61e-10,6;UBERON:0004854,1.61e-10,6;UBERON:0009034,1.61e-10,6;UBERON:0002095,1.61e-10,6;UBERON:0004782,1.61e-10,6;UBERON:0003281,1.61e-10,6;UBERON:0009664,1.61e-10,6;UBERON:0002296,1.61e-10,6;UBERON:0005602,1.61e-10,6;UBERON:0001179,1.61e-10,6;UBERON:0006293,1.61e-10,6;UBERON:0002204,4.39e-10,32;UBERON:0002390,6.63e-09,45;UBERON:0003061,6.63e-09,45;UBERON:0000029,1.84e-08,1;UBERON:0001097,1.84e-08,1;UBERON:0003968,1.84e-08,1;UBERON:0001467,1.84e-08,1;UBERON:0001134,1.87e-07,9;UBERON:0002036,1.87e-07,9;UBERON:0002385,1.87e-07,9;UBERON:0000486,1.87e-07,9;UBERON:0007503,1.87e-07,9;UBERON:0001015,1.87e-07,9;UBERON:0002329,1.87e-07,9;UBERON:0003082,1.87e-07,9;UBERON:0003059,1.87e-07,9;UBERON:0007282,1.87e-07,9;UBERON:0004290,1.87e-07,9;UBERON:0009618,1.87e-07,9;UBERON:0002371,3.48e-07,16;UBERON:0000383,9.31e-07,10|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.774739940649458,0.563154888606667,0.70219357896598,0.34243593645101,0.239316476986009,0.684802919724823,1.04904482902797,0.333109761815663,0.202475267389826,0,1.57731082679119,1.37114433605739,1.69755860719212,0.17008658030214,0.992909512008853,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,1.25559489221072,3.1253413780952,1.57057123192139,0,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.84831672011889,0,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0,0.239630249011841,0,0.508280908292259,0,0,0,0,0,0,0,0,0.870848794270651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1066395619397,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.162137619091711,0,0,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0.476087281772027,0.390267295715598,0.315270288212382,1.55025282754142,0.956728611944923,0.983179888294428,0.863424909329478,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36696704638282,1.23832120777933,0.925972636848558,0.565105371014073,0.820165366326151,1.37266903923914,0.679913719975421,0.419854356970974,0.967399816630967,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389762468933385,0.179026695667481,0.39736270956253,0.841368146639782,0.886137163047463,0.706765149637033,0.304827226619999,0.504130925684203,0.292373642219257,0.192423683280659,0.350630706544707,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0.290692833264657,0,0.169229215783353,0.182927972872773,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0.231867835620421|short_description=p3@Myo1g}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=246177 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=D6RHL4 | |||
|association_with_transcript=30bp_to_ENSMUST00000144725_5end | |||
|cluster_id=chr11:6420867..6420869,- | |||
|description=CAGE_peak_3_at_Myo1g_5end | |||
|id=chr11:6420867..6420869,- | |||
|ontology_enrichment_celltype=CL:0000988!6.51e-09!32;CL:0002032!6.51e-09!32;CL:0000037!6.51e-09!32;CL:0000566!6.51e-09!32;CL:0000837!6.51e-09!32;CL:0000838!1.41e-07!12;CL:0000084!6.92e-07!11;CL:0000827!6.92e-07!11;CL:0000542!8.64e-07!13;CL:0000051!8.64e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,6.44e-11,6;CL:0000556,6.44e-11,6;CL:0000050,1.87e-07,9;CL:0000355,1.87e-07,9;CL:0000763,3.48e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.34e-21,3;DOID:4045,3.34e-21,3;DOID:0050686,6.44e-11,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!5.75e-20!48;UBERON:0002390!1.37e-17!45;UBERON:0003061!1.37e-17!45;UBERON:0004177!9.30e-15!29;UBERON:0000065!4.02e-14!41;UBERON:0001004!1.44e-13!42;UBERON:0002405!2.09e-13!70;UBERON:0003081!5.57e-10!88;UBERON:0003104!2.18e-09!131;UBERON:0009142!2.18e-09!131;UBERON:0002370!2.54e-09!23;UBERON:0000974!2.54e-09!23;UBERON:0004807!2.54e-09!23;UBERON:0005058!2.54e-09!23;UBERON:0003351!2.54e-09!23;UBERON:0009113!2.54e-09!23;UBERON:0003295!2.54e-09!23;UBERON:0009722!2.54e-09!23;UBERON:0005562!2.54e-09!23;UBERON:0007690!2.54e-09!23;UBERON:0000926!9.08e-09!193;UBERON:0004120!9.08e-09!193;UBERON:0006603!9.08e-09!193;UBERON:0006562!1.00e-08!24;UBERON:0003408!1.00e-08!24;UBERON:0001557!1.00e-08!24;UBERON:0001042!1.00e-08!24;UBERON:0008814!1.00e-08!24;UBERON:0009145!1.00e-08!24;UBERON:0002048!1.72e-08!14;UBERON:0000117!1.72e-08!14;UBERON:0000171!1.72e-08!14;UBERON:0000170!1.72e-08!14;UBERON:0005597!1.72e-08!14;UBERON:0000118!1.72e-08!14;UBERON:0001041!3.62e-08!92;UBERON:0005057!3.93e-08!51;UBERON:0002106!1.38e-07!6;UBERON:0004457!1.38e-07!6;UBERON:0000042!1.38e-07!6;UBERON:0004854!1.38e-07!6;UBERON:0009034!1.38e-07!6;UBERON:0002095!1.38e-07!6;UBERON:0004782!1.38e-07!6;UBERON:0003281!1.38e-07!6;UBERON:0009664!1.38e-07!6;UBERON:0002296!1.38e-07!6;UBERON:0005602!1.38e-07!6;UBERON:0001179!1.38e-07!6;UBERON:0006293!1.38e-07!6;UBERON:0005911!2.34e-07!69;UBERON:0000072!3.18e-07!27;UBERON:0000077!3.47e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.32e-10,48;UBERON:0002405,1.32e-10,48;UBERON:0002106,1.61e-10,6;UBERON:0004457,1.61e-10,6;UBERON:0000042,1.61e-10,6;UBERON:0004854,1.61e-10,6;UBERON:0009034,1.61e-10,6;UBERON:0002095,1.61e-10,6;UBERON:0004782,1.61e-10,6;UBERON:0003281,1.61e-10,6;UBERON:0009664,1.61e-10,6;UBERON:0002296,1.61e-10,6;UBERON:0005602,1.61e-10,6;UBERON:0001179,1.61e-10,6;UBERON:0006293,1.61e-10,6;UBERON:0002204,4.39e-10,32;UBERON:0002390,6.63e-09,45;UBERON:0003061,6.63e-09,45;UBERON:0000029,1.84e-08,1;UBERON:0001097,1.84e-08,1;UBERON:0003968,1.84e-08,1;UBERON:0001467,1.84e-08,1;UBERON:0001134,1.87e-07,9;UBERON:0002036,1.87e-07,9;UBERON:0002385,1.87e-07,9;UBERON:0000486,1.87e-07,9;UBERON:0007503,1.87e-07,9;UBERON:0001015,1.87e-07,9;UBERON:0002329,1.87e-07,9;UBERON:0003082,1.87e-07,9;UBERON:0003059,1.87e-07,9;UBERON:0007282,1.87e-07,9;UBERON:0004290,1.87e-07,9;UBERON:0009618,1.87e-07,9;UBERON:0002371,3.48e-07,16;UBERON:0000383,9.31e-07,10 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.774739940649458,0.563154888606667,0.70219357896598,0.34243593645101,0.239316476986009,0.684802919724823,1.04904482902797,0.333109761815663,0.202475267389826,0,1.57731082679119,1.37114433605739,1.69755860719212,0.17008658030214,0.992909512008853,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,1.25559489221072,3.1253413780952,1.57057123192139,0,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.84831672011889,0,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0,0.239630249011841,0,0.508280908292259,0,0,0,0,0,0,0,0,0.870848794270651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1066395619397,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.162137619091711,0,0,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0.476087281772027,0.390267295715598,0.315270288212382,1.55025282754142,0.956728611944923,0.983179888294428,0.863424909329478,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36696704638282,1.23832120777933,0.925972636848558,0.565105371014073,0.820165366326151,1.37266903923914,0.679913719975421,0.419854356970974,0.967399816630967,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389762468933385,0.179026695667481,0.39736270956253,0.841368146639782,0.886137163047463,0.706765149637033,0.304827226619999,0.504130925684203,0.292373642219257,0.192423683280659,0.350630706544707,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0.290692833264657,0,0.169229215783353,0.182927972872773,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0.231867835620421 | |||
|short_description=p3@Myo1g | |||
}} |
Latest revision as of 21:46, 1 October 2015
Short description: | p3@Myo1g |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Myo1g_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENSMUST00000144725_5end |
EntrezGene: | Myo1g |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 6.44e-11 | 6 |
megakaryocyte | 6.44e-11 | 6 |
megakaryocyte-erythroid progenitor cell | 1.87e-07 | 9 |
multi-potent skeletal muscle stem cell | 1.87e-07 | 9 |
myeloid cell | 3.48e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.32e-10 | 48 |
immune system | 1.32e-10 | 48 |
spleen | 1.61e-10 | 6 |
cavity lining | 1.61e-10 | 6 |
serous membrane | 1.61e-10 | 6 |
gastrointestinal system mesentery | 1.61e-10 | 6 |
stomach region | 1.61e-10 | 6 |
mesentery | 1.61e-10 | 6 |
gastrointestinal system serosa | 1.61e-10 | 6 |
mesentery of stomach | 1.61e-10 | 6 |
gut mesentery | 1.61e-10 | 6 |
dorsal mesentery | 1.61e-10 | 6 |
dorsal mesogastrium | 1.61e-10 | 6 |
peritoneal cavity | 1.61e-10 | 6 |
spleen primordium | 1.61e-10 | 6 |
musculoskeletal system | 4.39e-10 | 32 |
hematopoietic system | 6.63e-09 | 45 |
blood island | 6.63e-09 | 45 |
lymph node | 1.84e-08 | 1 |
axillary lymph node | 1.84e-08 | 1 |
peripheral lymph node | 1.84e-08 | 1 |
shoulder | 1.84e-08 | 1 |
skeletal muscle tissue | 1.87e-07 | 9 |
striated muscle tissue | 1.87e-07 | 9 |
muscle tissue | 1.87e-07 | 9 |
multilaminar epithelium | 1.87e-07 | 9 |
epithelial vesicle | 1.87e-07 | 9 |
musculature | 1.87e-07 | 9 |
somite | 1.87e-07 | 9 |
myotome | 1.87e-07 | 9 |
presomitic mesoderm | 1.87e-07 | 9 |
presumptive segmental plate | 1.87e-07 | 9 |
dermomyotome | 1.87e-07 | 9 |
trunk paraxial mesoderm | 1.87e-07 | 9 |
bone marrow | 3.48e-07 | 16 |
musculature of body | 9.31e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.34e-21 | 3 |
muscle cancer | 3.34e-21 | 3 |
organ system cancer | 6.44e-11 | 6 |