FFCP PHASE1:Mm9::chr11:69831923..69831986,+: Difference between revisions
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{{FFCP|EntrezGene=13385|HGNC=|MCL_coexpression_id=2|UniProt=Q62108|association_with_transcript=0bp_to_ENSMUST00000108588_5end|description=CAGE_peak_1_at_Dlg4_5end|id=chr11:69831923..69831986,+|ontology_enrichment_celltype=CL:0000221!2.09e-17!44;CL:0000133!2.09e-17!44;CL:0002319!3.53e-17!43;CL:0000055!1.31e-15!50;CL:0000540!1.05e-14!33;CL:0000047!1.05e-14!33;CL:0000031!1.05e-14!33;CL:0000404!1.05e-14!33;CL:0000393!5.44e-14!39;CL:0000211!5.44e-14!39;CL:0000117!4.61e-13!23;CL:0000337!4.61e-13!23|ontology_enrichment_celltype_v019_2=CL:0000221,2.07e-17,44;CL:0000133,2.07e-17,44;CL:0002319,3.50e-17,43;CL:0000540,1.04e-14,33;CL:0000047,1.04e-14,33;CL:0000031,1.04e-14,33;CL:0000404,1.04e-14,33;CL:0000393,5.40e-14,39;CL:0000211,5.40e-14,39;CL:0000117,4.57e-13,23;CL:0000337,4.57e-13,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.03e-38!73;UBERON:0005743!4.03e-38!73;UBERON:0000073!2.31e-37!75;UBERON:0001016!2.31e-37!75;UBERON:0004121!1.07e-29!102;UBERON:0000924!1.07e-29!102;UBERON:0006601!1.07e-29!102;UBERON:0001049!3.53e-29!52;UBERON:0005068!3.53e-29!52;UBERON:0006241!3.53e-29!52;UBERON:0007135!3.53e-29!52;UBERON:0000955!2.18e-28!50;UBERON:0006238!2.18e-28!50;UBERON:0002346!3.65e-28!71;UBERON:0003075!3.65e-28!71;UBERON:0007284!3.65e-28!71;UBERON:0002616!1.13e-27!49;UBERON:0000033!1.05e-26!63;UBERON:0000153!3.96e-26!94;UBERON:0007811!4.13e-25!86;UBERON:0003056!1.15e-22!49;UBERON:0003080!1.20e-22!40;UBERON:0002780!5.01e-22!39;UBERON:0001890!5.01e-22!39;UBERON:0006240!5.01e-22!39;UBERON:0002020!1.63e-20!34;UBERON:0002791!8.13e-18!29;UBERON:0003528!8.13e-18!29;UBERON:0001893!8.13e-18!29;UBERON:0000956!2.96e-13!21;UBERON:0001869!2.96e-13!21;UBERON:0000203!2.96e-13!21;UBERON:0002619!2.71e-11!17;UBERON:0002021!4.55e-08!10;UBERON:0000411!4.55e-08!10;UBERON:0001950!4.55e-08!10;UBERON:0003076!5.72e-07!12;UBERON:0003057!5.72e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.94e-38,73;UBERON:0001016,2.26e-37,75;UBERON:0000073,1.10e-30,54;UBERON:0004121,2.25e-30,95;UBERON:0000924,2.25e-30,95;UBERON:0006601,2.25e-30,95;UBERON:0002346,1.19e-29,64;UBERON:0003075,1.19e-29,64;UBERON:0007284,1.19e-29,64;UBERON:0001049,3.47e-29,52;UBERON:0005068,3.47e-29,52;UBERON:0006241,3.47e-29,52;UBERON:0007135,3.47e-29,52;UBERON:0000955,2.12e-26,47;UBERON:0006238,2.12e-26,47;UBERON:0002616,1.07e-25,46;UBERON:0010371,1.32e-24,73;UBERON:0003056,1.14e-22,49;UBERON:0003080,1.18e-22,40;UBERON:0002780,4.95e-22,39;UBERON:0001890,4.95e-22,39;UBERON:0006240,4.95e-22,39;UBERON:0010314,1.41e-20,92;UBERON:0002020,1.61e-20,34;UBERON:0003528,8.05e-18,29;UBERON:0002791,8.05e-18,29;UBERON:0001893,8.05e-18,29;UBERON:0000956,2.94e-13,21;UBERON:0001869,2.94e-13,21;UBERON:0000203,2.94e-13,21;UBERON:0002619,2.69e-11,17;UBERON:0002021,4.53e-08,10;UBERON:0000411,4.53e-08,10;UBERON:0001950,4.53e-08,10;UBERON:0003076,5.70e-07,12;UBERON:0003057,5.70e-07,12|phase1_expression=42.9198910240848,0,0.454999239389536,0,0,2.51818907867835,1.16806320297763,26.5994046289647,15.3459707145317,10.7669682108117,9.75942418885378,9.57265907944037,36.8081569352092,29.7229368224591,1.66554880907831,2.22722794128809,0,0.788655413395594,1.64537320326887,0.42438965179803,106.304112688837,19.8581902401771,12.015190300391,0.95995453676044,1.37645568640302,0,0,0.861884930743556,0.570070258369122,0.252030129759931,0.443461021310609,14.6057054895715,8.61090702618398,0,0,0.498703936075477,0.204169356262369,0.837063261473815,1.5626706890476,3.66466620781659,0.588231488031014,0,2.91306211818692,32.1036885837722,32.3392410590251,35.0574296628812,100.928483420897,95.0589681818747,109.403719001767,113.547061059382,66.3535638504218,102.06432069913,0,27.5637613964311,14.452033363126,35.7590616089966,34.9570796725283,30.9403255366465,288.503273185786,252.32869711276,378.397347893189,43.3721001048489,56.9148669511129,49.0445345918362,50.4321844909157,45.4707273565504,94.0744347027791,104.891597352784,143.71380265955,177.397802967842,190.764739945703,265.655415495537,256.207507503872,195.127843149422,228.208066494421,271.169542049956,278.593178928453,446.394933945816,420.267474989082,298.458669133429,351.58701436406,383.913154100332,235.072085159163,227.91885706283,320.265127340194,292.566185375352,258.974087373568,246.047268489397,15.8267744066355,38.4659240943538,17.971598299504,1.72084775396277,0,1.07940638327563,1.94932925234301,1.34408066129201,19.24088555805,41.7554290316241,38.7081146858274,45.2274655373235,48.3092929834014,43.6310023208681,142.690934235722,106.660005473,4.76280290224671,3.29367825117628,2.52762222507392,17.6985013564543,20.1971549244794,29.0946592567057,32.9622120855658,31.6644097444627,30.4412456377997,29.2401922672088,36.3349105049328,22.2429866653526,6.42706916109372,19.5209131841881,4.42305275974937,23.6179600923217,12.8088080707028,14.0613823409214,3.72783522436244,317.081603163506,319.615674597332,3.57639877292028,12.9400334466394,5.39912457894067,10.2926883929182,333.433963315135,634.095835506616,368.669869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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13385 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q62108 | |||
|association_with_transcript=0bp_to_ENSMUST00000108588_5end | |||
|cluster_id=chr11:69831923..69831986,+ | |||
|description=CAGE_peak_1_at_Dlg4_5end | |||
|id=chr11:69831923..69831986,+ | |||
|ontology_enrichment_celltype=CL:0000221!2.09e-17!44;CL:0000133!2.09e-17!44;CL:0002319!3.53e-17!43;CL:0000055!1.31e-15!50;CL:0000540!1.05e-14!33;CL:0000047!1.05e-14!33;CL:0000031!1.05e-14!33;CL:0000404!1.05e-14!33;CL:0000393!5.44e-14!39;CL:0000211!5.44e-14!39;CL:0000117!4.61e-13!23;CL:0000337!4.61e-13!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.07e-17,44;CL:0000133,2.07e-17,44;CL:0002319,3.50e-17,43;CL:0000540,1.04e-14,33;CL:0000047,1.04e-14,33;CL:0000031,1.04e-14,33;CL:0000404,1.04e-14,33;CL:0000393,5.40e-14,39;CL:0000211,5.40e-14,39;CL:0000117,4.57e-13,23;CL:0000337,4.57e-13,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.03e-38!73;UBERON:0005743!4.03e-38!73;UBERON:0000073!2.31e-37!75;UBERON:0001016!2.31e-37!75;UBERON:0004121!1.07e-29!102;UBERON:0000924!1.07e-29!102;UBERON:0006601!1.07e-29!102;UBERON:0001049!3.53e-29!52;UBERON:0005068!3.53e-29!52;UBERON:0006241!3.53e-29!52;UBERON:0007135!3.53e-29!52;UBERON:0000955!2.18e-28!50;UBERON:0006238!2.18e-28!50;UBERON:0002346!3.65e-28!71;UBERON:0003075!3.65e-28!71;UBERON:0007284!3.65e-28!71;UBERON:0002616!1.13e-27!49;UBERON:0000033!1.05e-26!63;UBERON:0000153!3.96e-26!94;UBERON:0007811!4.13e-25!86;UBERON:0003056!1.15e-22!49;UBERON:0003080!1.20e-22!40;UBERON:0002780!5.01e-22!39;UBERON:0001890!5.01e-22!39;UBERON:0006240!5.01e-22!39;UBERON:0002020!1.63e-20!34;UBERON:0002791!8.13e-18!29;UBERON:0003528!8.13e-18!29;UBERON:0001893!8.13e-18!29;UBERON:0000956!2.96e-13!21;UBERON:0001869!2.96e-13!21;UBERON:0000203!2.96e-13!21;UBERON:0002619!2.71e-11!17;UBERON:0002021!4.55e-08!10;UBERON:0000411!4.55e-08!10;UBERON:0001950!4.55e-08!10;UBERON:0003076!5.72e-07!12;UBERON:0003057!5.72e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.94e-38,73;UBERON:0001016,2.26e-37,75;UBERON:0000073,1.10e-30,54;UBERON:0004121,2.25e-30,95;UBERON:0000924,2.25e-30,95;UBERON:0006601,2.25e-30,95;UBERON:0002346,1.19e-29,64;UBERON:0003075,1.19e-29,64;UBERON:0007284,1.19e-29,64;UBERON:0001049,3.47e-29,52;UBERON:0005068,3.47e-29,52;UBERON:0006241,3.47e-29,52;UBERON:0007135,3.47e-29,52;UBERON:0000955,2.12e-26,47;UBERON:0006238,2.12e-26,47;UBERON:0002616,1.07e-25,46;UBERON:0010371,1.32e-24,73;UBERON:0003056,1.14e-22,49;UBERON:0003080,1.18e-22,40;UBERON:0002780,4.95e-22,39;UBERON:0001890,4.95e-22,39;UBERON:0006240,4.95e-22,39;UBERON:0010314,1.41e-20,92;UBERON:0002020,1.61e-20,34;UBERON:0003528,8.05e-18,29;UBERON:0002791,8.05e-18,29;UBERON:0001893,8.05e-18,29;UBERON:0000956,2.94e-13,21;UBERON:0001869,2.94e-13,21;UBERON:0000203,2.94e-13,21;UBERON:0002619,2.69e-11,17;UBERON:0002021,4.53e-08,10;UBERON:0000411,4.53e-08,10;UBERON:0001950,4.53e-08,10;UBERON:0003076,5.70e-07,12;UBERON:0003057,5.70e-07,12 | |||
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| |||
|short_description=p1@Dlg4 | |||
}} |
Latest revision as of 14:09, 25 September 2015
Short description: | p1@Dlg4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dlg4_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000108588_5end |
EntrezGene: | Dlg4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.07e-17 | 44 |
neurectodermal cell | 2.07e-17 | 44 |
neural cell | 3.50e-17 | 43 |
neuron | 1.04e-14 | 33 |
neuronal stem cell | 1.04e-14 | 33 |
neuroblast | 1.04e-14 | 33 |
electrically signaling cell | 1.04e-14 | 33 |
electrically responsive cell | 5.40e-14 | 39 |
electrically active cell | 5.40e-14 | 39 |
CNS neuron (sensu Vertebrata) | 4.57e-13 | 23 |
neuroblast (sensu Vertebrata) | 4.57e-13 | 23 |