FFCP PHASE1:Mm9::chr11:86940544..86940553,+: Difference between revisions
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{{FFCP|EntrezGene=68729|HGNC=|MCL_coexpression_id=13|UniProt=Q6PCX9,Q5SX31|association_with_transcript=-25bp_to_ENSMUST00000041282,NM_197987,uc007ktm.1,uc011ybw.1_5end|description=CAGE_peak_4_at_Trim37_5end|id=chr11:86940544..86940553,+|ontology_enrichment_celltype=CL:0000117!4.00e-13!23;CL:0000337!4.00e-13!23;CL:0000540!1.51e-11!33;CL:0000047!1.51e-11!33;CL:0000031!1.51e-11!33;CL:0000404!1.51e-11!33;CL:0000393!5.03e-09!39;CL:0000211!5.03e-09!39;CL:0000221!5.17e-07!44;CL:0000133!5.17e-07!44;CL:0002319!8.99e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,3.73e-20,23;CL:0000337,3.73e-20,23;CL:0000540,2.89e-13,33;CL:0000047,2.89e-13,33;CL:0000031,2.89e-13,33;CL:0000404,2.89e-13,33;CL:0000393,3.66e-10,39;CL:0000211,3.66e-10,39;CL:0002319,1.32e-08,43;CL:0000221,2.90e-08,44;CL:0000133,2.90e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.53e-20!73;UBERON:0005743!1.53e-20!73;UBERON:0000073!2.23e-20!75;UBERON:0001016!2.23e-20!75;UBERON:0000033!3.37e-20!63;UBERON:0001049!4.60e-20!52;UBERON:0005068!4.60e-20!52;UBERON:0006241!4.60e-20!52;UBERON:0007135!4.60e-20!52;UBERON:0002346!1.54e-19!71;UBERON:0003075!1.54e-19!71;UBERON:0007284!1.54e-19!71;UBERON:0000955!1.45e-18!50;UBERON:0006238!1.45e-18!50;UBERON:0004121!5.16e-18!102;UBERON:0000924!5.16e-18!102;UBERON:0006601!5.16e-18!102;UBERON:0002616!5.21e-18!49;UBERON:0003056!9.72e-17!49;UBERON:0002020!7.12e-15!34;UBERON:0003080!7.98e-15!40;UBERON:0002780!3.62e-14!39;UBERON:0001890!3.62e-14!39;UBERON:0006240!3.62e-14!39;UBERON:0007811!2.13e-12!86;UBERON:0002791!7.73e-12!29;UBERON:0003528!7.73e-12!29;UBERON:0001893!7.73e-12!29;UBERON:0000153!8.72e-12!94;UBERON:0000956!5.72e-08!21;UBERON:0001869!5.72e-08!21;UBERON:0000203!5.72e-08!21;UBERON:0000025!1.79e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.45e-33,54;UBERON:0001049,3.24e-31,52;UBERON:0005068,3.24e-31,52;UBERON:0006241,3.24e-31,52;UBERON:0007135,3.24e-31,52;UBERON:0001017,2.84e-30,73;UBERON:0001016,4.86e-29,75;UBERON:0002346,3.46e-28,64;UBERON:0003075,3.46e-28,64;UBERON:0007284,3.46e-28,64;UBERON:0000955,3.16e-25,47;UBERON:0006238,3.16e-25,47;UBERON:0002616,2.98e-24,46;UBERON:0002020,6.12e-24,34;UBERON:0004121,6.73e-24,95;UBERON:0000924,6.73e-24,95;UBERON:0006601,6.73e-24,95;UBERON:0010371,6.35e-23,73;UBERON:0003080,3.99e-21,40;UBERON:0003056,2.16e-20,49;UBERON:0002780,5.66e-20,39;UBERON:0001890,5.66e-20,39;UBERON:0006240,5.66e-20,39;UBERON:0003528,2.22e-18,29;UBERON:0002791,2.22e-18,29;UBERON:0001893,2.22e-18,29;UBERON:0010314,3.64e-16,92;UBERON:0000956,2.39e-11,21;UBERON:0001869,2.39e-11,21;UBERON:0000203,2.39e-11,21;UBERON:0003076,1.39e-10,12;UBERON:0003057,1.39e-10,12;UBERON:0000025,1.35e-09,114;UBERON:0002021,1.10e-08,10;UBERON:0000411,1.10e-08,10;UBERON:0001950,1.10e-08,10;UBERON:0002420,1.31e-08,8;UBERON:0007245,1.31e-08,8;UBERON:0010009,1.31e-08,8;UBERON:0010011,1.31e-08,8;UBERON:0000454,1.31e-08,8;UBERON:0002240,2.15e-08,6;UBERON:0005174,2.15e-08,6;UBERON:0001137,2.15e-08,6;UBERON:0002619,3.60e-08,17;UBERON:0004111,3.68e-08,122;UBERON:0001948,4.46e-07,5;UBERON:0002315,4.46e-07,5|phase1_expression=0.80074423552397,0,0,0.30246421130683,0,0,0,0.129123323441576,0,0,0,0.239316476986009,0.171200729931206,0,0,0,0,0,0.411343300817216,0,0.510259740906419,0.695036658406197,0.522399578277871,0.319984845586813,0,0,0,0,0,0,0,0.635030673459631,1.23012957516914,0,0,0.166234645358492,0.204169356262369,0,0,0.523523743973798,0,0,0,0.629484089877886,0.506884656097573,0.367093504323363,0,0.436050312760893,0,0.194429899074283,0,0,0.167782606057736,0,0,0,0.286533439938757,0,1.61853168687678,3.70293685490423,3.1691570175309,0,0,0,0,0,0,0.384218305321555,2.28117147078651,1.08004750665353,2.52389953621658,2.28520787523043,1.54607978666129,2.81728838194394,0.862609239164127,0.919218786610021,2.20231761998777,3.06449611404451,2.61131106535614,1.84640802822271,2.10421580285542,2.08365348222704,2.23346399201105,1.12552522006336,2.75036845998258,5.59794312399969,3.84403538157578,3.35519002485541,0.454357159999104,0.604572480854284,0.289864488701678,0,0,0,0,0,0.280888840263504,0.340860645156116,0,0,0.985903938436763,2.56652954828636,0,0,0.216491041011214,0.506719730950197,1.01104889002957,0.22836775943812,0.258937883647172,0.445326417194474,0.693941307064543,0.608930956624282,0.691846491768175,0.150722640552623,0.23517741427141,0.502666365318702,0,0.433798070759735,0,0,0.220841518460394,0.484875253135222,1.86391761218122,3.22058876712702,2.93225389538837,0,0.239630249011841,0.599902730993408,0.508280908292259,3.59497534571574,1.83000241127451,1.63350657746724,1.73824320192276,2.81287003063364,2.70124457927428,2.27137768294861,0.509196819251581,0.746441823660558,0.252722758433675,0.631325567659422,1.17108398666433,0.689706313300419,1.26043490863744,0.753524089178575,1.36072998302656,0.896796041993948,0.655912071918102,1.29351685369508,1.5089759505299,1.32374256117473,0.703804496655795,0,0.278047249225598,0.348252166522167,0.205782136407943,1.39323986772945,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68729 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PCX9,Q5SX31 | |||
|association_with_transcript=-25bp_to_ENSMUST00000041282,NM_197987,uc007ktm.1,uc011ybw.1_5end | |||
|cluster_id=chr11:86940544..86940553,+ | |||
|description=CAGE_peak_4_at_Trim37_5end | |||
|id=chr11:86940544..86940553,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.00e-13!23;CL:0000337!4.00e-13!23;CL:0000540!1.51e-11!33;CL:0000047!1.51e-11!33;CL:0000031!1.51e-11!33;CL:0000404!1.51e-11!33;CL:0000393!5.03e-09!39;CL:0000211!5.03e-09!39;CL:0000221!5.17e-07!44;CL:0000133!5.17e-07!44;CL:0002319!8.99e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.73e-20,23;CL:0000337,3.73e-20,23;CL:0000540,2.89e-13,33;CL:0000047,2.89e-13,33;CL:0000031,2.89e-13,33;CL:0000404,2.89e-13,33;CL:0000393,3.66e-10,39;CL:0000211,3.66e-10,39;CL:0002319,1.32e-08,43;CL:0000221,2.90e-08,44;CL:0000133,2.90e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.53e-20!73;UBERON:0005743!1.53e-20!73;UBERON:0000073!2.23e-20!75;UBERON:0001016!2.23e-20!75;UBERON:0000033!3.37e-20!63;UBERON:0001049!4.60e-20!52;UBERON:0005068!4.60e-20!52;UBERON:0006241!4.60e-20!52;UBERON:0007135!4.60e-20!52;UBERON:0002346!1.54e-19!71;UBERON:0003075!1.54e-19!71;UBERON:0007284!1.54e-19!71;UBERON:0000955!1.45e-18!50;UBERON:0006238!1.45e-18!50;UBERON:0004121!5.16e-18!102;UBERON:0000924!5.16e-18!102;UBERON:0006601!5.16e-18!102;UBERON:0002616!5.21e-18!49;UBERON:0003056!9.72e-17!49;UBERON:0002020!7.12e-15!34;UBERON:0003080!7.98e-15!40;UBERON:0002780!3.62e-14!39;UBERON:0001890!3.62e-14!39;UBERON:0006240!3.62e-14!39;UBERON:0007811!2.13e-12!86;UBERON:0002791!7.73e-12!29;UBERON:0003528!7.73e-12!29;UBERON:0001893!7.73e-12!29;UBERON:0000153!8.72e-12!94;UBERON:0000956!5.72e-08!21;UBERON:0001869!5.72e-08!21;UBERON:0000203!5.72e-08!21;UBERON:0000025!1.79e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.45e-33,54;UBERON:0001049,3.24e-31,52;UBERON:0005068,3.24e-31,52;UBERON:0006241,3.24e-31,52;UBERON:0007135,3.24e-31,52;UBERON:0001017,2.84e-30,73;UBERON:0001016,4.86e-29,75;UBERON:0002346,3.46e-28,64;UBERON:0003075,3.46e-28,64;UBERON:0007284,3.46e-28,64;UBERON:0000955,3.16e-25,47;UBERON:0006238,3.16e-25,47;UBERON:0002616,2.98e-24,46;UBERON:0002020,6.12e-24,34;UBERON:0004121,6.73e-24,95;UBERON:0000924,6.73e-24,95;UBERON:0006601,6.73e-24,95;UBERON:0010371,6.35e-23,73;UBERON:0003080,3.99e-21,40;UBERON:0003056,2.16e-20,49;UBERON:0002780,5.66e-20,39;UBERON:0001890,5.66e-20,39;UBERON:0006240,5.66e-20,39;UBERON:0003528,2.22e-18,29;UBERON:0002791,2.22e-18,29;UBERON:0001893,2.22e-18,29;UBERON:0010314,3.64e-16,92;UBERON:0000956,2.39e-11,21;UBERON:0001869,2.39e-11,21;UBERON:0000203,2.39e-11,21;UBERON:0003076,1.39e-10,12;UBERON:0003057,1.39e-10,12;UBERON:0000025,1.35e-09,114;UBERON:0002021,1.10e-08,10;UBERON:0000411,1.10e-08,10;UBERON:0001950,1.10e-08,10;UBERON:0002420,1.31e-08,8;UBERON:0007245,1.31e-08,8;UBERON:0010009,1.31e-08,8;UBERON:0010011,1.31e-08,8;UBERON:0000454,1.31e-08,8;UBERON:0002240,2.15e-08,6;UBERON:0005174,2.15e-08,6;UBERON:0001137,2.15e-08,6;UBERON:0002619,3.60e-08,17;UBERON:0004111,3.68e-08,122;UBERON:0001948,4.46e-07,5;UBERON:0002315,4.46e-07,5 | |||
|phase1_expression=0.80074423552397,0,0,0.30246421130683,0,0,0,0.129123323441576,0,0,0,0.239316476986009,0.171200729931206,0,0,0,0,0,0.411343300817216,0,0.510259740906419,0.695036658406197,0.522399578277871,0.319984845586813,0,0,0,0,0,0,0,0.635030673459631,1.23012957516914,0,0,0.166234645358492,0.204169356262369,0,0,0.523523743973798,0,0,0,0.629484089877886,0.506884656097573,0.367093504323363,0,0.436050312760893,0,0.194429899074283,0,0,0.167782606057736,0,0,0,0.286533439938757,0,1.61853168687678,3.70293685490423,3.1691570175309,0,0,0,0,0,0,0.384218305321555,2.28117147078651,1.08004750665353,2.52389953621658,2.28520787523043,1.54607978666129,2.81728838194394,0.862609239164127,0.919218786610021,2.20231761998777,3.06449611404451,2.61131106535614,1.84640802822271,2.10421580285542,2.08365348222704,2.23346399201105,1.12552522006336,2.75036845998258,5.59794312399969,3.84403538157578,3.35519002485541,0.454357159999104,0.604572480854284,0.289864488701678,0,0,0,0,0,0.280888840263504,0.340860645156116,0,0,0.985903938436763,2.56652954828636,0,0,0.216491041011214,0.506719730950197,1.01104889002957,0.22836775943812,0.258937883647172,0.445326417194474,0.693941307064543,0.608930956624282,0.691846491768175,0.150722640552623,0.23517741427141,0.502666365318702,0,0.433798070759735,0,0,0.220841518460394,0.484875253135222,1.86391761218122,3.22058876712702,2.93225389538837,0,0.239630249011841,0.599902730993408,0.508280908292259,3.59497534571574,1.83000241127451,1.63350657746724,1.73824320192276,2.81287003063364,2.70124457927428,2.27137768294861,0.509196819251581,0.746441823660558,0.252722758433675,0.631325567659422,1.17108398666433,0.689706313300419,1.26043490863744,0.753524089178575,1.36072998302656,0.896796041993948,0.655912071918102,1.29351685369508,1.5089759505299,1.32374256117473,0.703804496655795,0,0.278047249225598,0.348252166522167,0.205782136407943,1.39323986772945,1.40442637462647,0.51469581422943,0.568326998791185,0.414251545071004,0.703578179943289,0.180062061461015,0.946978942340841,1.18058539048442,0.925602677324269,0.465067889500816,0.536546802799238,0.116765342367169,0.658239399653922,0.492502392237286,0.486412857275134,0.438599962275997,0,0,1.89260953707715,2.36680608472354,0.330418782983798,0.264450566663544,0.639864751605702,0,0.77320476793256,0.201683524623343,0,0.190225626112559,0,0.329397909448022,0.502670417600539,0,0.38992817423824,0,0,0,1.32767530667157,0.799739588268102,0,0.610953983535943,1.16371492300575,0.49095073923223,0.252946148497029,1.03327103585722,0.31399745568275,0.740382983530803,0,0.83422552858047,0.393117990226406,0.449724224769707,0,0.241177159752417,0.25462585178142,0,0.162135226775035,1.09824565275233,0,0,0.624075346229121,0.757736633841335,0.358794827043824,0,0.554259570499814,1.13694847062291,0.488894929326078,0.848725428875941,0.704070744865506,1.00503754465089,0.714130922658041,0.195133647857799,0.788175720530955,0,0.478364305972461,0,0,0.144649058581512,0,0,0,0.275936746304732,5.45872005958493,5.62616095642575,0.327869890753351,0,0,0.390438744296638,0.646270193198397,0.716906393857656,0.222798674082394,0.849229592366497,0.809621403349789,0.584511715822624,1.58115111178609,1.92792789853084,0.141940085208269,0.178065603667255,0.977321756121456,0.494910368917606,0,0.242780636154981,0.906970670894253,0.754420319023592,0,0.307435147943927,0,0,0,0.632073515871632,0,0,1.02131881726136,1.44048875225048,0.388076051348264,0.643011105094777,1.06404140185364,0.535106452806212,1.97458824722545,0.913394847343798,0.469343416127421,0.21183207086382,0,0.16488625294148,0.322928853391811,0.120625849856312,0.358117032009409,0.328281799490123,0.582961673259701,5.93360966433631,0.170870880797853,0.206386867963223,0.740778109478847,0.376736914009382,0.820165366326151,0.915112692826091,0.679913719975421,0,0.276399947608848,0,0.158167996790568,0.406638934253697,0.108005340821801,0.209088296014469,0.218362563746178,0.404593039154462,0.578574190077352,0.26175594198403,0.129614973291793,0,0.56369293868419,1.19613236835183,0.827292452285488,1.16670713006429,0.645799117388655,1.01373675294467,0.704143431874524,0.39061315453185,1.25831213310853,0.241584120826006,0.288030006257865,0.948033361884535,0,0.410843828659309,0.389762468933385,0.358053391334963,0.39736270956253,0.240390899039938,0.147689527174577,0.605798699688886,0.914481679859998,0.403304740547362,0.292373642219257,0.384847366561318,0.233753804363138,0.680191150845634,1.77588762699252,1.34570784914214,0.671538465456314,0,0,0.36630324853453,0.214368379079066,0,5.0827665835536,2.30162618253588,1.71868654031819,1.71853182343688,3.42541259885321,0.755393897389701,1.35004500046361,1.35096360967266,1.35942722695261,3.10656187051092,1.66059756134683,0.798049746802062,0.853668028770671,0.972426868273176,1.25767897576789,0.919217542250071,0.222246727801615,0.412070114477788,1.28367683836726,0.505394423527595,0.50695859978048,0.565879024158229,0.37456602987953,0.832326981263301,0.804096565378586,0.952587382566147,0.579421629724277,0.578727661391115,0.412085900803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| |||
|short_description=p4@Trim37 | |||
}} |
Latest revision as of 21:57, 25 September 2015
Short description: | p4@Trim37 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Trim37_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -25bp_to_ENSMUST00000041282, NM_197987, uc007ktm.1, uc011ybw.1_5end |
EntrezGene: | Trim37 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.73e-20 | 23 |
neuroblast (sensu Vertebrata) | 3.73e-20 | 23 |
neuron | 2.89e-13 | 33 |
neuronal stem cell | 2.89e-13 | 33 |
neuroblast | 2.89e-13 | 33 |
electrically signaling cell | 2.89e-13 | 33 |
electrically responsive cell | 3.66e-10 | 39 |
electrically active cell | 3.66e-10 | 39 |
neural cell | 1.32e-08 | 43 |
ectodermal cell | 2.90e-08 | 44 |
neurectodermal cell | 2.90e-08 | 44 |