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FFCP PHASE1:Mm9::chr12:40763974..40763998,-: Difference between revisions

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{{FFCP|EntrezGene=11861|HGNC=|UniProt=G3UVX1,P61213|association_with_transcript=-11bp_to_ENSMUST00000136441,NM_007487,uc007nkr.1,uc007nks.1_5end|description=CAGE_peak_3_at_Arl4a_5end|id=chr12:40763974..40763998,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!7.99e-13!130;UBERON:0000925!7.99e-13!130;UBERON:0006595!7.99e-13!130;UBERON:0001007!3.61e-12!128;UBERON:0001555!3.61e-12!128;UBERON:0007026!3.61e-12!128;UBERON:0004921!1.32e-11!126;UBERON:0004185!1.32e-11!126;UBERON:0009854!7.56e-10!23;UBERON:0009856!7.56e-10!23;UBERON:0002365!1.02e-09!25;UBERON:0002330!1.02e-09!25;UBERON:0002107!1.15e-09!22;UBERON:0007499!1.15e-09!22;UBERON:0006925!1.15e-09!22;UBERON:0009497!1.15e-09!22;UBERON:0000015!1.15e-09!22;UBERON:0002423!1.15e-09!22;UBERON:0006235!1.15e-09!22;UBERON:0008835!1.15e-09!22;UBERON:0003894!1.15e-09!22;UBERON:0004161!1.15e-09!22;UBERON:0008836!1.15e-09!22;UBERON:0000466!8.07e-08!79;UBERON:0004923!6.29e-07!24;UBERON:0000077!7.43e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.36e-11,118;UBERON:0000925,2.36e-11,118;UBERON:0006595,2.36e-11,118;UBERON:0001007,1.05e-10,116;UBERON:0001555,1.05e-10,116;UBERON:0007026,1.05e-10,116;UBERON:0009854,1.47e-10,23;UBERON:0009856,1.47e-10,23;UBERON:0002365,2.04e-10,25;UBERON:0002330,2.04e-10,25;UBERON:0002107,2.32e-10,22;UBERON:0007499,2.32e-10,22;UBERON:0006925,2.32e-10,22;UBERON:0009497,2.32e-10,22;UBERON:0000015,2.32e-10,22;UBERON:0002423,2.32e-10,22;UBERON:0006235,2.32e-10,22;UBERON:0008835,2.32e-10,22;UBERON:0003894,2.32e-10,22;UBERON:0004161,2.32e-10,22;UBERON:0008836,2.32e-10,22;UBERON:0004921,3.75e-10,114;UBERON:0004923,3.77e-07,24|phase1_expression=1.76163731815273,4.18770489167233,3.63999391511629,4.53696316960245,4.00716583957078,1.00727563147134,2.56973904655078,3.35720640948098,0.422366166455,0.468129052643987,1.36974374580404,1.59544317990673,2.39681021903688,2.44777126773193,3.33109761815663,5.06188168474565,8.39474253753776,1.41957974411207,2.33094537129756,1.27316895539409,2.46625541438102,0.397163804803541,0.783599367416806,1.59992422793407,2.98232065387321,4.01962374880514,3.4460959692726,3.878482188346,2.28028103347649,1.51218077855958,1.77384408524244,2.54012269383853,1.23012957516914,0,0.866554859253824,1.16364251750945,1.42918549383658,0.418531630736908,0.7813353445238,1.0470474879476,1.17646297606203,0,0.485510353031154,0.629484089877886,0.101376931219515,0.183546752161682,0.782391344348039,0.218025156380447,0.219686182734472,0,0.279972843250725,0,1.34226084846189,0.725362142011344,1.68046899571232,0.514518872071894,1.43266719969378,0.515672092277442,0.202316460859598,0,0,0.338844532069132,0.889294796111139,0.449949858640699,0.988866362566974,0,0,0,0.103689612308478,0,0,1.71390590642282,0.441737081903227,0.367472397644862,0.383381884072945,0.919218786610021,1.10115880999389,1.0214987046815,0.768032666281217,0.659431438650969,0.823388792421687,1.04182674111352,1.95428099300967,1.68828783009504,1.22238598221448,1.47314292736834,0.569486723196412,0.372798891650601,0.908714319998209,0.982430281388212,1.15945795480671,2.58127163094416,2.03991400112325,2.69851595818909,3.89865850468601,3.58421509677868,1.26399978118577,0.681721290312231,1.03914401841148,0.70667914902068,1.12674735821344,0,2.54805239706646,0,0.649473123033642,1.26679932737549,1.01104889002957,2.62622923353838,1.8125651855302,1.03909497345377,0.520455980298408,0.304465478312141,0.461230994512117,0.60289056221049,0.470354828542819,1.63366568728578,1.97755974187499,1.3013942122792,3.5384422077995,0.647067399789637,1.54589062922275,5.33362778448744,1.86391761218122,0.292780797011547,1.25668024088073,1.78819938646014,1.43778149407104,1.79970819298022,1.14363204365758,0.748953197024114,1.37250180845588,0.879580464790051,1.21677024134594,2.30143911597297,0.62336413367868,1.29793010454206,1.83310854930569,2.36373244159177,1.0108910337347,1.47309299120532,0.520481771850815,0.919608417733892,0.900310649026746,0.30140963567143,0.884474488967262,0.768682321709099,0.937017245597288,1.55222022443409,0.431135985865684,0.756424320671277,1.05570674498369,0.43839146485515,0.834141747676794,1.74126083261083,2.05782136407943,0.59710280045548,2.1066395619397,0.772043721344145,1.42081749697796,0,0.703578179943289,0.36012412292203,0.23674473558521,0.393528463494808,0.462801338662135,0.232533944750408,1.07309360559848,0.350296027101508,0.16455984991348,0.32833492815819,0.891756905004413,0.292399974850665,0.439100230582101,1.07365135008297,0.630869845692382,1.23485534855141,5.61711931072457,2.90895623329899,0,1.16118335930219,0.644337306610467,0.403367049246685,1.77902435075896,0.951128130562796,2.37264530772256,2.9645811850322,3.2673577144035,1.98956472041151,3.11942539390592,1.79763881730844,2.37751854862164,2.58883655230677,0.569003702859245,0.456994050438915,0,0.610953983535943,0.969762435838129,1.54298803758701,2.46622494784603,0.738050739898011,1.56998727841375,0.4935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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=11861
|HGNC=
|TSSclassifier=NA
|UniProt=G3UVX1,P61213
|association_with_transcript=-11bp_to_ENSMUST00000136441,NM_007487,uc007nkr.1,uc007nks.1_5end
|cluster_id=chr12:40763974..40763998,-
|description=CAGE_peak_3_at_Arl4a_5end
|id=chr12:40763974..40763998,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!7.99e-13!130;UBERON:0000925!7.99e-13!130;UBERON:0006595!7.99e-13!130;UBERON:0001007!3.61e-12!128;UBERON:0001555!3.61e-12!128;UBERON:0007026!3.61e-12!128;UBERON:0004921!1.32e-11!126;UBERON:0004185!1.32e-11!126;UBERON:0009854!7.56e-10!23;UBERON:0009856!7.56e-10!23;UBERON:0002365!1.02e-09!25;UBERON:0002330!1.02e-09!25;UBERON:0002107!1.15e-09!22;UBERON:0007499!1.15e-09!22;UBERON:0006925!1.15e-09!22;UBERON:0009497!1.15e-09!22;UBERON:0000015!1.15e-09!22;UBERON:0002423!1.15e-09!22;UBERON:0006235!1.15e-09!22;UBERON:0008835!1.15e-09!22;UBERON:0003894!1.15e-09!22;UBERON:0004161!1.15e-09!22;UBERON:0008836!1.15e-09!22;UBERON:0000466!8.07e-08!79;UBERON:0004923!6.29e-07!24;UBERON:0000077!7.43e-07!97
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.36e-11,118;UBERON:0000925,2.36e-11,118;UBERON:0006595,2.36e-11,118;UBERON:0001007,1.05e-10,116;UBERON:0001555,1.05e-10,116;UBERON:0007026,1.05e-10,116;UBERON:0009854,1.47e-10,23;UBERON:0009856,1.47e-10,23;UBERON:0002365,2.04e-10,25;UBERON:0002330,2.04e-10,25;UBERON:0002107,2.32e-10,22;UBERON:0007499,2.32e-10,22;UBERON:0006925,2.32e-10,22;UBERON:0009497,2.32e-10,22;UBERON:0000015,2.32e-10,22;UBERON:0002423,2.32e-10,22;UBERON:0006235,2.32e-10,22;UBERON:0008835,2.32e-10,22;UBERON:0003894,2.32e-10,22;UBERON:0004161,2.32e-10,22;UBERON:0008836,2.32e-10,22;UBERON:0004921,3.75e-10,114;UBERON:0004923,3.77e-07,24
|phase1_expression=1.76163731815273,4.18770489167233,3.63999391511629,4.53696316960245,4.00716583957078,1.00727563147134,2.56973904655078,3.35720640948098,0.422366166455,0.468129052643987,1.36974374580404,1.59544317990673,2.39681021903688,2.44777126773193,3.33109761815663,5.06188168474565,8.39474253753776,1.41957974411207,2.33094537129756,1.27316895539409,2.46625541438102,0.397163804803541,0.783599367416806,1.59992422793407,2.98232065387321,4.01962374880514,3.4460959692726,3.878482188346,2.28028103347649,1.51218077855958,1.77384408524244,2.54012269383853,1.23012957516914,0,0.866554859253824,1.16364251750945,1.42918549383658,0.418531630736908,0.7813353445238,1.0470474879476,1.17646297606203,0,0.485510353031154,0.629484089877886,0.101376931219515,0.183546752161682,0.782391344348039,0.218025156380447,0.219686182734472,0,0.279972843250725,0,1.34226084846189,0.725362142011344,1.68046899571232,0.514518872071894,1.43266719969378,0.515672092277442,0.202316460859598,0,0,0.338844532069132,0.889294796111139,0.449949858640699,0.988866362566974,0,0,0,0.103689612308478,0,0,1.71390590642282,0.441737081903227,0.367472397644862,0.383381884072945,0.919218786610021,1.10115880999389,1.0214987046815,0.768032666281217,0.659431438650969,0.823388792421687,1.04182674111352,1.95428099300967,1.68828783009504,1.22238598221448,1.47314292736834,0.569486723196412,0.372798891650601,0.908714319998209,0.982430281388212,1.15945795480671,2.58127163094416,2.03991400112325,2.69851595818909,3.89865850468601,3.58421509677868,1.26399978118577,0.681721290312231,1.03914401841148,0.70667914902068,1.12674735821344,0,2.54805239706646,0,0.649473123033642,1.26679932737549,1.01104889002957,2.62622923353838,1.8125651855302,1.03909497345377,0.520455980298408,0.304465478312141,0.461230994512117,0.60289056221049,0.470354828542819,1.63366568728578,1.97755974187499,1.3013942122792,3.5384422077995,0.647067399789637,1.54589062922275,5.33362778448744,1.86391761218122,0.292780797011547,1.25668024088073,1.78819938646014,1.43778149407104,1.79970819298022,1.14363204365758,0.748953197024114,1.37250180845588,0.879580464790051,1.21677024134594,2.30143911597297,0.62336413367868,1.29793010454206,1.83310854930569,2.36373244159177,1.0108910337347,1.47309299120532,0.520481771850815,0.919608417733892,0.900310649026746,0.30140963567143,0.884474488967262,0.768682321709099,0.937017245597288,1.55222022443409,0.431135985865684,0.756424320671277,1.05570674498369,0.43839146485515,0.834141747676794,1.74126083261083,2.05782136407943,0.59710280045548,2.1066395619397,0.772043721344145,1.42081749697796,0,0.703578179943289,0.36012412292203,0.23674473558521,0.393528463494808,0.462801338662135,0.232533944750408,1.07309360559848,0.350296027101508,0.16455984991348,0.32833492815819,0.891756905004413,0.292399974850665,0.439100230582101,1.07365135008297,0.630869845692382,1.23485534855141,5.61711931072457,2.90895623329899,0,1.16118335930219,0.644337306610467,0.403367049246685,1.77902435075896,0.951128130562796,2.37264530772256,2.9645811850322,3.2673577144035,1.98956472041151,3.11942539390592,1.79763881730844,2.37751854862164,2.58883655230677,0.569003702859245,0.456994050438915,0,0.610953983535943,0.969762435838129,1.54298803758701,2.46622494784603,0.738050739898011,1.56998727841375,0.493588655687202,2.96452627087149,2.16898637430922,2.35870794135844,1.34917267430912,3.85434230638156,4.3411888755435,3.05551022137704,1.72617682470486,5.99900339067631,3.0201755450689,2.87536413054709,3.72140947668503,1.5601883655728,3.78868316920668,3.76734568396016,4.82443521363367,2.03228509183265,0.757965647081939,0.814824882210129,0.509235257325564,0.938760993154008,1.00503754465089,1.6663054862021,1.56106918286239,2.04925687338048,1.32878813789265,1.75400245523236,0.655453258862952,0.690739927463582,1.59113964439663,0,2.17562273527484,1.96705709207614,1.65562047782839,0.160550589987792,0.35163505977661,0.983609672260053,1.26235463602186,0.315508219416257,0.390438744296638,0.646270193198397,0.238968797952552,0.445597348164788,0.283076530788832,0,0,0.790575555893047,1.60660658210904,0.709700426041343,0,1.79175655288934,0.659880491890142,5.30980553359851,0.971122544619926,0.906970670894253,1.13163047853539,1.77181135728464,0.922305443831782,1.03371317267288,1.81766864738753,1.06949213515416,1.8962205476149,2.10837217149998,1.03135543248187,1.36175842301515,1.44048875225048,0,1.28602221018955,0.709360934569094,1.24858172321449,0.493647061806363,0.608929898229199,2.58138878870081,1.90648863777438,2.64634077665954,1.31909002353184,2.26050197374268,1.74907482291652,2.38744688006273,2.9545361954111,3.78925087618806,1.11255181206306,2.73393409276564,1.03193433981611,1.29636169158798,4.70921142511728,5.19438065339896,4.11800711771741,1.35982743995084,0.839708713941948,2.48759952847963,1.90934123603023,0.790839983952838,0.609958401380546,1.08005340821801,1.04544148007234,1.31017538247707,0.944050424693745,2.23164330458407,1.57053565190418,1.03691978633434,1.24267862617385,16.3470952218415,0.747582730219894,0.827292452285488,0.972255941720238,1.16243841129958,0.337912250981556,1.05621514781179,1.3020438484395,1.15345278868282,4.1069300540421,7.20075015644664,0.948033361884535,1.21635129174099,0.718976700153791,0.51968329191118,1.43221356533985,0.993406773906324,0.961563596159751,1.03382669022204,1.21159739937777,1.905170166375,1.00826185136841,0.974578807397524,0.577271049841977,1.16876902181569,3.17422537061296,0.221985953374065,0.358855426437903,0.503653849092235,1.73870634628971,1.68914227906064,0.73260649706906,1.92931541171159,1.50471631210609,0.564751842617067,0,1.71868654031819,1.3748254587495,2.74033007908257,0,2.02506750069542,1.35096360967266,0.453142408984205,1.55328093525546,0.62272408550506,0.399024873401031,0.853668028770671,2.18796045361465,0.838452650511929,1.83843508450014,0.888986911206461,2.26638562962784,0.320919209591815,2.27427490587418,0.50695859978048,1.88626341386076,1.49826411951812,1.79270426733634,0.918967503289812,0.952587382566147,2.20180219295225,1.15745532278223,1.23625770240992,1.03039244094078,1.71434626192708,0.887379030796687,1.66905332963125,1.74415699958794,2.07040636913727,1.94613598150856,1.82927972872773,0.526139422875686,1.22223702461276,1.12228454331548,0.830445126869219,1.28055827088233,0.818462086339379,1.70430525304563,0.964533054905707,0.499621155875892,1.63752125911786,0.644613162144895,1.91288332068843,0.661774257358546,1.39120701372253
|short_description=p3@Arl4a
}}

Latest revision as of 14:43, 26 September 2015

Short description:p3@Arl4a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Arl4a_5end
Coexpression cluster:NA
Association with transcript: -11bp_to_ENSMUST00000136441, NM_007487, uc007nkr.1, uc007nks.1_5end
EntrezGene:Arl4a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Arl4a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.54
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.60
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.40
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.45
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.06
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A58.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.33
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I23.88
Ileum epithelium, pool1.CNhs13199.10252-104B92.28
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.63
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.36
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I35.62
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E92.96
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.54
kidney, neonate N10.CNhs11206.758-6D52.47
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D73.85
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F46.00
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H13.77
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H31.75
skin, neonate N06.CNhs11097.693-20I52.39
skin, neonate N10.CNhs11108.762-6C42.95
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G22.73
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D14.71
spleen, neonate N20.CNhs11112.824-19H15.19
spleen, neonate N25.CNhs11099.1354-25G34.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.49
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A92.23
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G516.35
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H34.11
testis, neonate N30.CNhs11130.1391-42E27.20
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D31.91
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure2.36e-11118
endoderm2.36e-11118
presumptive endoderm2.36e-11118
digestive system1.05e-10116
digestive tract1.05e-10116
primitive gut1.05e-10116
digestive tract diverticulum1.47e-1023
sac1.47e-1023
exocrine gland2.04e-1025
exocrine system2.04e-1025
liver2.32e-1022
epithelial sac2.32e-1022
digestive gland2.32e-1022
epithelium of foregut-midgut junction2.32e-1022
anatomical boundary2.32e-1022
hepatobiliary system2.32e-1022
foregut-midgut junction2.32e-1022
hepatic diverticulum2.32e-1022
liver primordium2.32e-1022
septum transversum2.32e-1022
liver bud2.32e-1022
subdivision of digestive tract3.75e-10114
organ component layer3.77e-0724
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