FFCP PHASE1:Hg19::chr9:79009288..79009378,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:79009288..79009378,-
|short_description=p1@RFK
|description=CAGE_peak_1_at_RFK_5end
|association_with_transcript=42bp_to_ENST00000376736_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55312 | |EntrezGene=55312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30324 | |HGNC=30324 | ||
|TSSclassifier=strong | |||
|UniProt=Q969G6 | |UniProt=Q969G6 | ||
|association_with_transcript=42bp_to_ENST00000376736_5end | |||
|cluster_id=chr9:79009288..79009378,- | |||
|description=CAGE_peak_1_at_RFK_5end | |||
|id=chr9:79009288..79009378,- | |||
|ontology_enrichment_celltype=CL:0000213!3.33e-07!57;CL:0000215!3.33e-07!57 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.69e-07,58;CL:0000215,1.69e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!1.14e-10!32;UBERON:0001893!2.24e-09!34;UBERON:0002780!2.32e-09!41;UBERON:0001890!2.32e-09!41;UBERON:0006240!2.32e-09!41;UBERON:0000033!3.20e-09!123;UBERON:0003080!3.48e-09!42;UBERON:0002020!5.33e-09!34;UBERON:0003528!5.33e-09!34;UBERON:0000062!5.91e-09!511;UBERON:0002791!7.49e-09!33;UBERON:0000956!1.13e-08!25;UBERON:0000203!1.13e-08!25;UBERON:0002616!1.43e-08!59;UBERON:0000153!1.78e-08!129;UBERON:0007811!1.78e-08!129;UBERON:0000955!3.32e-08!69;UBERON:0006238!3.32e-08!69;UBERON:0000477!3.92e-08!286;UBERON:0005743!5.31e-08!86;UBERON:0003056!6.46e-08!61;UBERON:0000467!8.35e-08!625;UBERON:0000064!1.27e-07!219;UBERON:0001017!1.39e-07!82;UBERON:0000480!1.41e-07!626;UBERON:0001049!2.04e-07!57;UBERON:0005068!2.04e-07!57;UBERON:0006241!2.04e-07!57;UBERON:0007135!2.04e-07!57;UBERON:0000073!4.24e-07!94;UBERON:0001016!4.24e-07!94;UBERON:0002619!4.24e-07!22;UBERON:0001950!6.35e-07!20;UBERON:0000025!8.43e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.44e-10;32!UBERON:0002791;3.03e-09;32!UBERON:0001893;9.19e-09;34!UBERON:0000956;1.04e-08;25!UBERON:0000203;1.04e-08;25!UBERON:0003528;1.73e-08;34!UBERON:0002020;1.73e-08;34!UBERON:0002619;3.98e-07;22!UBERON:0001950;5.86e-07;20!UBERON:0002780;6.24e-07;41!UBERON:0001890;6.24e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.14e-10,32;UBERON:0002791,1.72e-09,32;UBERON:0001893,2.24e-09,34;UBERON:0002780,2.32e-09,41;UBERON:0001890,2.32e-09,41;UBERON:0003080,2.32e-09,41;UBERON:0006240,2.32e-09,41;UBERON:0003528,5.33e-09,34;UBERON:0002020,5.33e-09,34;UBERON:0000956,1.13e-08,25;UBERON:0000203,1.13e-08,25;UBERON:0000955,2.70e-08,68;UBERON:0006238,2.70e-08,68;UBERON:0000073,4.17e-08,53;UBERON:0002616,4.17e-08,53;UBERON:0001017,1.19e-07,81;UBERON:0001049,1.62e-07,56;UBERON:0005068,1.62e-07,56;UBERON:0006241,1.62e-07,56;UBERON:0007135,1.62e-07,56;UBERON:0003056,1.86e-07,61;UBERON:0002619,4.24e-07,22;UBERON:0010314,4.72e-07,132;UBERON:0000025,5.83e-07,192;UBERON:0001950,6.35e-07,20;UBERON:0001016,9.53e-07,89 | |||
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| ||
|short_description=p1@RFK | |||
}} | }} |
Latest revision as of 21:42, 17 September 2015
Short description: | p1@RFK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RFK_5end |
Coexpression cluster: | NA |
Association with transcript: | 42bp_to_ENST00000376736_5end |
EntrezGene: | RFK |
HGNC: | 30324 |
UniProt: | Q969G6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.69e-07 | 58 |
barrier cell | 1.69e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 1.14e-10 | 32 |
regional part of telencephalon | 1.72e-09 | 32 |
telencephalon | 2.24e-09 | 34 |
regional part of forebrain | 2.32e-09 | 41 |
forebrain | 2.32e-09 | 41 |
anterior neural tube | 2.32e-09 | 41 |
future forebrain | 2.32e-09 | 41 |
brain grey matter | 5.33e-09 | 34 |
gray matter | 5.33e-09 | 34 |
cerebral cortex | 1.13e-08 | 25 |
pallium | 1.13e-08 | 25 |
brain | 2.70e-08 | 68 |
future brain | 2.70e-08 | 68 |
regional part of nervous system | 4.17e-08 | 53 |
regional part of brain | 4.17e-08 | 53 |
central nervous system | 1.19e-07 | 81 |
neural tube | 1.62e-07 | 56 |
neural rod | 1.62e-07 | 56 |
future spinal cord | 1.62e-07 | 56 |
neural keel | 1.62e-07 | 56 |
pre-chordal neural plate | 1.86e-07 | 61 |
regional part of cerebral cortex | 4.24e-07 | 22 |
structure with developmental contribution from neural crest | 4.72e-07 | 132 |
tube | 5.83e-07 | 192 |
neocortex | 6.35e-07 | 20 |
nervous system | 9.53e-07 | 89 |