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FFCP PHASE1:Mm9::chr12:77923407..77923418,-: Difference between revisions

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{{FFCP|EntrezGene=104886|HGNC=|MCL_coexpression_id=2|UniProt=|association_with_transcript=30bp_to_ENSMUST00000134124_5end|description=CAGE_peak_7_at_Rab15_5end|id=chr12:77923407..77923418,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!5.72e-14!63;UBERON:0000955!1.15e-11!50;UBERON:0006238!1.15e-11!50;UBERON:0002616!4.26e-11!49;UBERON:0001049!5.03e-11!52;UBERON:0005068!5.03e-11!52;UBERON:0006241!5.03e-11!52;UBERON:0007135!5.03e-11!52;UBERON:0007811!1.68e-10!86;UBERON:0002791!1.08e-09!29;UBERON:0003528!1.08e-09!29;UBERON:0001893!1.08e-09!29;UBERON:0003056!1.51e-09!49;UBERON:0002021!3.41e-09!10;UBERON:0000411!3.41e-09!10;UBERON:0001950!3.41e-09!10;UBERON:0002020!3.44e-09!34;UBERON:0004121!3.65e-09!102;UBERON:0000924!3.65e-09!102;UBERON:0006601!3.65e-09!102;UBERON:0000064!5.20e-09!99;UBERON:0002346!7.46e-09!71;UBERON:0003075!7.46e-09!71;UBERON:0007284!7.46e-09!71;UBERON:0003080!1.09e-08!40;UBERON:0000153!2.26e-08!94;UBERON:0002780!3.80e-08!39;UBERON:0001890!3.80e-08!39;UBERON:0006240!3.80e-08!39;UBERON:0001017!4.70e-08!73;UBERON:0005743!4.70e-08!73;UBERON:0007023!1.11e-07!51;UBERON:0000073!2.10e-07!75;UBERON:0001016!2.10e-07!75;UBERON:0000956!3.54e-07!21;UBERON:0001869!3.54e-07!21;UBERON:0000203!3.54e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.48e-28,10;UBERON:0000411,1.48e-28,10;UBERON:0001950,1.48e-28,10;UBERON:0000955,1.39e-24,47;UBERON:0006238,1.39e-24,47;UBERON:0002616,7.76e-23,46;UBERON:0001049,1.08e-21,52;UBERON:0005068,1.08e-21,52;UBERON:0006241,1.08e-21,52;UBERON:0007135,1.08e-21,52;UBERON:0000073,9.38e-21,54;UBERON:0003528,8.12e-20,29;UBERON:0002791,8.12e-20,29;UBERON:0001893,8.12e-20,29;UBERON:0003080,1.41e-19,40;UBERON:0002619,2.30e-19,17;UBERON:0010371,5.72e-19,73;UBERON:0002346,1.88e-18,64;UBERON:0003075,1.88e-18,64;UBERON:0007284,1.88e-18,64;UBERON:0000956,2.47e-18,21;UBERON:0001869,2.47e-18,21;UBERON:0000203,2.47e-18,21;UBERON:0002780,6.93e-18,39;UBERON:0001890,6.93e-18,39;UBERON:0006240,6.93e-18,39;UBERON:0004121,1.39e-17,95;UBERON:0000924,1.39e-17,95;UBERON:0006601,1.39e-17,95;UBERON:0001017,3.61e-17,73;UBERON:0003056,4.39e-17,49;UBERON:0001016,1.43e-16,75;UBERON:0002020,2.13e-16,34;UBERON:0007023,2.01e-13,51;UBERON:0010314,2.62e-11,92;UBERON:0004111,3.47e-09,122;UBERON:0000025,2.82e-07,114;UBERON:0000483,6.46e-07,174;UBERON:0000119,9.02e-07,176|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,2.01455126294268,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0.22940928106717,0,0,0.861884930743556,0.380046838912748,1.00812051903972,0.886922042621219,0,0,0,0.288851619751275,0.166234645358492,0.816677425049476,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0.571301968807607,0.220868540951614,0.122490799214954,0,0,0,1.27687338085188,0.46081959976873,0.527545150920775,0.182975287204819,0.52091337055676,2.51264699101243,1.12552522006336,0.763991238884051,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0.432982082022428,0,0.505524445014783,0.34255163915718,0,0,0,0,0,0,0,0.125666591329675,0.494389935468748,0,0,0.161766849947409,0,0.484875253135222,0,1.17112318804619,1.04723353406728,0.255457055208591,0,0,0,1.79748767285787,3.20250421973039,0,6.77914848749878,5.62574006126727,1.0389402227978,1.78465389374533,0,0.124406970610093,0,1.26265113531884,0.130120442962704,0.229902104433473,0.540186389416048,0,0.136072998302656,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,3.36463917702604,0.308713837137853,0.330418782983798,0,0,0,0,0.403367049246685,0,0.190225626112559,0.949058123089023,0.494096864172033,0.251335208800269,0.397912944082302,0,0.898819408654221,0.216138049874694,0,0.189667900953082,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.339490171550376,0.469380496577004,0,0,0.390267295715598,0,0.664394068946325,0.318909537314974,0.163863314715738,0,0.578596234326046,0,0,1.96705709207614,1.93155722413313,0.80275294993896,1.87538698547525,0,0.252470927204373,0,0,0.430846795465598,0,0,0.283076530788832,0,0.292255857911312,0,1.28528526568723,0,0,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0.329098041204242,0,0.23467170806371,0,1.10264199027481,0.32977250588296,0,0.0603129249281559,0.477489376012546,0.328281799490123,0.291480836629851,1.11255181206306,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.216010681643603,0.418176592028937,0.436725127492355,0.539457385539283,0.165306911450672,0.26175594198403,0.648074866458964,1.86401793926078,0.56369293868419,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0.241584120826006,0,0,0.608175645870493,0.513554785824136,0.129920822977795,0,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0.304827226619999,0.100826185136841,0.38983152295901,0,0.467507608726276,0.453460767230423,0,0.179427713218951,0.503653849092235,0.965947970160952,0,0.549454872801795,0.857473516316263,3.00943262421218,4.51801474093653,3.68260189205742,1.71868654031819,8.07709957015332,10.2762377965596,6.0431511791176,6.07520250208625,5.85417564191487,2.71885445390523,7.24864436452548,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0.441596760403192,0,0.532427418478012,0,0,0.376437521661322,0.169229215783353,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.394017929502254,0,0.464810523557898,0.192906610981141,0.249810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p7@Rab15}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=104886
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=
|association_with_transcript=30bp_to_ENSMUST00000134124_5end
|cluster_id=chr12:77923407..77923418,-
|description=CAGE_peak_7_at_Rab15_5end
|id=chr12:77923407..77923418,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!5.72e-14!63;UBERON:0000955!1.15e-11!50;UBERON:0006238!1.15e-11!50;UBERON:0002616!4.26e-11!49;UBERON:0001049!5.03e-11!52;UBERON:0005068!5.03e-11!52;UBERON:0006241!5.03e-11!52;UBERON:0007135!5.03e-11!52;UBERON:0007811!1.68e-10!86;UBERON:0002791!1.08e-09!29;UBERON:0003528!1.08e-09!29;UBERON:0001893!1.08e-09!29;UBERON:0003056!1.51e-09!49;UBERON:0002021!3.41e-09!10;UBERON:0000411!3.41e-09!10;UBERON:0001950!3.41e-09!10;UBERON:0002020!3.44e-09!34;UBERON:0004121!3.65e-09!102;UBERON:0000924!3.65e-09!102;UBERON:0006601!3.65e-09!102;UBERON:0000064!5.20e-09!99;UBERON:0002346!7.46e-09!71;UBERON:0003075!7.46e-09!71;UBERON:0007284!7.46e-09!71;UBERON:0003080!1.09e-08!40;UBERON:0000153!2.26e-08!94;UBERON:0002780!3.80e-08!39;UBERON:0001890!3.80e-08!39;UBERON:0006240!3.80e-08!39;UBERON:0001017!4.70e-08!73;UBERON:0005743!4.70e-08!73;UBERON:0007023!1.11e-07!51;UBERON:0000073!2.10e-07!75;UBERON:0001016!2.10e-07!75;UBERON:0000956!3.54e-07!21;UBERON:0001869!3.54e-07!21;UBERON:0000203!3.54e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.48e-28,10;UBERON:0000411,1.48e-28,10;UBERON:0001950,1.48e-28,10;UBERON:0000955,1.39e-24,47;UBERON:0006238,1.39e-24,47;UBERON:0002616,7.76e-23,46;UBERON:0001049,1.08e-21,52;UBERON:0005068,1.08e-21,52;UBERON:0006241,1.08e-21,52;UBERON:0007135,1.08e-21,52;UBERON:0000073,9.38e-21,54;UBERON:0003528,8.12e-20,29;UBERON:0002791,8.12e-20,29;UBERON:0001893,8.12e-20,29;UBERON:0003080,1.41e-19,40;UBERON:0002619,2.30e-19,17;UBERON:0010371,5.72e-19,73;UBERON:0002346,1.88e-18,64;UBERON:0003075,1.88e-18,64;UBERON:0007284,1.88e-18,64;UBERON:0000956,2.47e-18,21;UBERON:0001869,2.47e-18,21;UBERON:0000203,2.47e-18,21;UBERON:0002780,6.93e-18,39;UBERON:0001890,6.93e-18,39;UBERON:0006240,6.93e-18,39;UBERON:0004121,1.39e-17,95;UBERON:0000924,1.39e-17,95;UBERON:0006601,1.39e-17,95;UBERON:0001017,3.61e-17,73;UBERON:0003056,4.39e-17,49;UBERON:0001016,1.43e-16,75;UBERON:0002020,2.13e-16,34;UBERON:0007023,2.01e-13,51;UBERON:0010314,2.62e-11,92;UBERON:0004111,3.47e-09,122;UBERON:0000025,2.82e-07,114;UBERON:0000483,6.46e-07,174;UBERON:0000119,9.02e-07,176
|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,2.01455126294268,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0.22940928106717,0,0,0.861884930743556,0.380046838912748,1.00812051903972,0.886922042621219,0,0,0,0.288851619751275,0.166234645358492,0.816677425049476,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0.571301968807607,0.220868540951614,0.122490799214954,0,0,0,1.27687338085188,0.46081959976873,0.527545150920775,0.182975287204819,0.52091337055676,2.51264699101243,1.12552522006336,0.763991238884051,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0.432982082022428,0,0.505524445014783,0.34255163915718,0,0,0,0,0,0,0,0.125666591329675,0.494389935468748,0,0,0.161766849947409,0,0.484875253135222,0,1.17112318804619,1.04723353406728,0.255457055208591,0,0,0,1.79748767285787,3.20250421973039,0,6.77914848749878,5.62574006126727,1.0389402227978,1.78465389374533,0,0.124406970610093,0,1.26265113531884,0.130120442962704,0.229902104433473,0.540186389416048,0,0.136072998302656,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,3.36463917702604,0.308713837137853,0.330418782983798,0,0,0,0,0.403367049246685,0,0.190225626112559,0.949058123089023,0.494096864172033,0.251335208800269,0.397912944082302,0,0.898819408654221,0.216138049874694,0,0.189667900953082,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.339490171550376,0.469380496577004,0,0,0.390267295715598,0,0.664394068946325,0.318909537314974,0.163863314715738,0,0.578596234326046,0,0,1.96705709207614,1.93155722413313,0.80275294993896,1.87538698547525,0,0.252470927204373,0,0,0.430846795465598,0,0,0.283076530788832,0,0.292255857911312,0,1.28528526568723,0,0,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0.329098041204242,0,0.23467170806371,0,1.10264199027481,0.32977250588296,0,0.0603129249281559,0.477489376012546,0.328281799490123,0.291480836629851,1.11255181206306,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.216010681643603,0.418176592028937,0.436725127492355,0.539457385539283,0.165306911450672,0.26175594198403,0.648074866458964,1.86401793926078,0.56369293868419,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0.241584120826006,0,0,0.608175645870493,0.513554785824136,0.129920822977795,0,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0.304827226619999,0.100826185136841,0.38983152295901,0,0.467507608726276,0.453460767230423,0,0.179427713218951,0.503653849092235,0.965947970160952,0,0.549454872801795,0.857473516316263,3.00943262421218,4.51801474093653,3.68260189205742,1.71868654031819,8.07709957015332,10.2762377965596,6.0431511791176,6.07520250208625,5.85417564191487,2.71885445390523,7.24864436452548,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0.441596760403192,0,0.532427418478012,0,0,0.376437521661322,0.169229215783353,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.394017929502254,0,0.464810523557898,0.192906610981141,0.249810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421
|short_description=p7@Rab15
}}

Latest revision as of 19:40, 26 September 2015

Short description:p7@Rab15
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Rab15_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 30bp_to_ENSMUST00000134124_5end
EntrezGene:Rab15
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Rab15

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D56.78
cortex, neonate N30.CNhs11107.1392-42F25.63
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.08
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
occipital lobe1.48e-2810
visual cortex1.48e-2810
neocortex1.48e-2810
brain1.39e-2447
future brain1.39e-2447
regional part of brain7.76e-2346
neural tube1.08e-2152
neural rod1.08e-2152
future spinal cord1.08e-2152
neural keel1.08e-2152
regional part of nervous system9.38e-2154
brain grey matter8.12e-2029
regional part of telencephalon8.12e-2029
telencephalon8.12e-2029
anterior neural tube1.41e-1940
regional part of cerebral cortex2.30e-1917
ecto-epithelium5.72e-1973
neurectoderm1.88e-1864
neural plate1.88e-1864
presumptive neural plate1.88e-1864
cerebral cortex2.47e-1821
cerebral hemisphere2.47e-1821
pallium2.47e-1821
regional part of forebrain6.93e-1839
forebrain6.93e-1839
future forebrain6.93e-1839
ectoderm-derived structure1.39e-1795
ectoderm1.39e-1795
presumptive ectoderm1.39e-1795
central nervous system3.61e-1773
pre-chordal neural plate4.39e-1749
nervous system1.43e-1675
gray matter2.13e-1634
adult organism2.01e-1351
structure with developmental contribution from neural crest2.62e-1192
anatomical conduit3.47e-09122
tube2.82e-07114
epithelium6.46e-07174
cell layer9.02e-07176
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