FFCP PHASE1:Hg19::chr3:42623428..42623489,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9117 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16828 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BRL7,F8VQT7,C9J9A4,C9JNW1,F8WDR5,F8WBN1,F5H0H7 | |||
|association_with_transcript=0bp_to_ENST00000264454,ENST00000383750,ENST00000416880,ENST00000420163,ENST00000423701,ENST00000445388,ENST00000449617,ENST00000454141,ENST00000536332,uc003clh.2,uc003clj.2,uc010hic.2,uc011azo.1_5end | |||
|cluster_id=chr3:42623428..42623489,- | |||
|description=CAGE_peak_1_at_SEC22C_5end | |||
|id=chr3:42623428..42623489,- | |||
|ontology_enrichment_celltype=CL:0000055!4.57e-12!180;CL:0002078!2.30e-10!44;CL:0000222!3.59e-10!119;CL:0000057!9.92e-10!75;CL:0000115!9.37e-09!35;CL:0000220!1.12e-08!246;CL:0000213!2.96e-08!57;CL:0000215!2.96e-08!57;CL:0002321!3.60e-08!248 | |||
|ontology_enrichment_celltype_v019=CL:0002078;4.82e-08;45!CL:0000115;9.67e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,6.59e-11,45;CL:0000222,1.28e-10,121;CL:0000057,5.52e-10,76;CL:0000115,2.68e-09,36;CL:0000213,1.03e-08,58;CL:0000215,1.03e-08,58;CL:0002321,1.61e-08,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.48e-16!57;UBERON:0005068!1.48e-16!57;UBERON:0006241!1.48e-16!57;UBERON:0007135!1.48e-16!57;UBERON:0000119!1.60e-16!312;UBERON:0000475!5.94e-16!365;UBERON:0004121!8.93e-16!169;UBERON:0000483!1.10e-15!309;UBERON:0002616!1.50e-15!59;UBERON:0000073!1.52e-15!94;UBERON:0001016!1.52e-15!94;UBERON:0000033!2.77e-15!123;UBERON:0003075!4.37e-15!86;UBERON:0007284!4.37e-15!86;UBERON:0000924!4.72e-15!173;UBERON:0006601!4.72e-15!173;UBERON:0005743!8.56e-15!86;UBERON:0001017!1.02e-14!82;UBERON:0000955!3.50e-14!69;UBERON:0006238!3.50e-14!69;UBERON:0002346!5.90e-14!90;UBERON:0000153!9.80e-14!129;UBERON:0007811!9.80e-14!129;UBERON:0003056!1.32e-11!61;UBERON:0002780!7.50e-11!41;UBERON:0001890!7.50e-11!41;UBERON:0006240!7.50e-11!41;UBERON:0003080!9.18e-11!42;UBERON:0002020!1.33e-10!34;UBERON:0003528!1.33e-10!34;UBERON:0001893!1.42e-10!34;UBERON:0004111!1.55e-10!241;UBERON:0000025!2.68e-10!194;UBERON:0002791!2.72e-10!33;UBERON:0000477!4.87e-10!286;UBERON:0001869!1.63e-09!32;UBERON:0003076!2.15e-07!15;UBERON:0003057!2.15e-07!15;UBERON:0000956!2.83e-07!25;UBERON:0000203!2.83e-07!25;UBERON:0000064!4.54e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.26e-09;34!UBERON:0000073;3.60e-09;53!UBERON:0002616;3.60e-09;53!UBERON:0003528;3.61e-09;34!UBERON:0002020;3.61e-09;34!UBERON:0002791;5.20e-09;32!UBERON:0001869;7.58e-09;32!UBERON:0002780;3.08e-08;41!UBERON:0001890;3.08e-08;41!UBERON:0000956;2.91e-07;25!UBERON:0000203;2.91e-07;25!UBERON:0001017;3.68e-07;75!UBERON:0000955;6.10e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,2.66e-17,309;UBERON:0010371,4.41e-17,104;UBERON:0001049,1.15e-16,56;UBERON:0005068,1.15e-16,56;UBERON:0006241,1.15e-16,56;UBERON:0007135,1.15e-16,56;UBERON:0000483,1.93e-16,306;UBERON:0003075,2.44e-16,82;UBERON:0007284,2.44e-16,82;UBERON:0010314,3.03e-16,132;UBERON:0004121,7.23e-16,171;UBERON:0000924,7.23e-16,171;UBERON:0006601,7.23e-16,171;UBERON:0001016,1.76e-15,89;UBERON:0002346,4.32e-15,86;UBERON:0000073,5.14e-15,53;UBERON:0002616,5.14e-15,53;UBERON:0001017,9.36e-15,81;UBERON:0000955,3.08e-14,68;UBERON:0006238,3.08e-14,68;UBERON:0003056,3.48e-12,61;UBERON:0002780,7.50e-11,41;UBERON:0001890,7.50e-11,41;UBERON:0003080,7.50e-11,41;UBERON:0006240,7.50e-11,41;UBERON:0003528,1.33e-10,34;UBERON:0002020,1.33e-10,34;UBERON:0001893,1.42e-10,34;UBERON:0004111,1.45e-10,240;UBERON:0000025,3.26e-10,192;UBERON:0002791,8.91e-10,32;UBERON:0001869,1.63e-09,32;UBERON:0003076,2.15e-07,15;UBERON:0003057,2.15e-07,15;UBERON:0000956,2.83e-07,25;UBERON:0000203,2.83e-07,25 | |||
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| |||
|short_description=p1@SEC22C | |||
}} |
Latest revision as of 06:13, 18 September 2015
Short description: | p1@SEC22C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEC22C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000264454, ENST00000383750, ENST00000416880, ENST00000420163, ENST00000423701, ENST00000445388, ENST00000449617, ENST00000454141, ENST00000536332, uc003clh.2, uc003clj.2, uc010hic.2, uc011azo.1_5end |
EntrezGene: | SEC22C |
HGNC: | 16828 |
UniProt: | Q9BRL7F8VQT7C9J9A4C9JNW1F8WDR5F8WBN1F5H0H7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 6.59e-11 | 45 |
mesodermal cell | 1.28e-10 | 121 |
fibroblast | 5.52e-10 | 76 |
endothelial cell | 2.68e-09 | 36 |
lining cell | 1.03e-08 | 58 |
barrier cell | 1.03e-08 | 58 |
embryonic cell | 1.61e-08 | 250 |