FFCP PHASE1:Hg19::chr3:48130707..48130789,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4134 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6862 | |||
|TSSclassifier=strong | |||
|UniProt=P27816,B9ZVR1,Q86V26 | |||
|association_with_transcript=0bp_to_ENST00000360240,ENST00000383737,NM_001134364,NM_002375,NM_030885,uc003csb.2,uc003csc.3,uc003csf.3,uc003csg.2,uc011bbf.1_5end | |||
|cluster_id=chr3:48130707..48130789,- | |||
|description=CAGE_peak_4_at_MAP4_5end | |||
|id=chr3:48130707..48130789,- | |||
|ontology_enrichment_celltype=CL:0002321!1.19e-15!248;CL:0000055!1.40e-15!180;CL:0000220!1.83e-15!246;CL:0000222!9.75e-08!119;CL:0000057!1.46e-07!75;CL:0000183!2.01e-07!59;CL:0000192!5.56e-07!42;CL:0000514!5.56e-07!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.41e-16,250;CL:0000222,2.46e-08,121;CL:0000057,9.30e-08,76;CL:0000192,1.77e-07,43;CL:0000514,1.77e-07,43;CL:0000680,6.41e-07,58;CL:0000056,6.41e-07,58;CL:0000355,6.41e-07,58;CL:0000187,6.67e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.09e-35!365;UBERON:0000119!2.52e-32!312;UBERON:0000483!3.73e-31!309;UBERON:0004111!4.78e-25!241;UBERON:0000477!5.22e-24!286;UBERON:0000025!6.55e-23!194;UBERON:0000481!4.30e-20!347;UBERON:0004121!1.13e-18!169;UBERON:0000924!1.95e-17!173;UBERON:0006601!1.95e-17!173;UBERON:0003075!4.35e-16!86;UBERON:0007284!4.35e-16!86;UBERON:0000033!4.86e-16!123;UBERON:0000468!1.51e-15!659;UBERON:0002346!2.13e-14!90;UBERON:0000467!2.49e-14!625;UBERON:0001049!3.32e-14!57;UBERON:0005068!3.32e-14!57;UBERON:0006241!3.32e-14!57;UBERON:0007135!3.32e-14!57;UBERON:0000153!4.60e-14!129;UBERON:0007811!4.60e-14!129;UBERON:0000480!4.80e-14!626;UBERON:0002616!3.30e-13!59;UBERON:0000955!6.63e-13!69;UBERON:0006238!6.63e-13!69;UBERON:0005743!1.51e-12!86;UBERON:0001017!1.88e-12!82;UBERON:0003056!3.40e-12!61;UBERON:0002100!4.05e-12!216;UBERON:0000073!5.04e-12!94;UBERON:0001016!5.04e-12!94;UBERON:0000064!1.54e-11!219;UBERON:0003914!1.88e-11!118;UBERON:0005256!4.61e-11!143;UBERON:0000922!7.76e-11!612;UBERON:0000923!1.72e-10!604;UBERON:0005291!1.72e-10!604;UBERON:0006598!1.72e-10!604;UBERON:0002532!1.72e-10!604;UBERON:0002050!1.97e-10!605;UBERON:0005423!1.97e-10!605;UBERON:0002049!2.45e-10!79;UBERON:0007798!2.45e-10!79;UBERON:0003080!1.82e-09!42;UBERON:0002780!2.80e-09!41;UBERON:0001890!2.80e-09!41;UBERON:0006240!2.80e-09!41;UBERON:0000490!4.15e-09!138;UBERON:0003104!9.67e-09!238;UBERON:0009142!9.67e-09!238;UBERON:0001981!1.10e-08!60;UBERON:0007500!1.10e-08!60;UBERON:0004537!1.10e-08!60;UBERON:0006965!1.10e-08!60;UBERON:0000062!1.45e-08!511;UBERON:0000055!3.75e-08!69;UBERON:0001893!1.19e-07!34;UBERON:0001637!1.23e-07!42;UBERON:0003509!1.23e-07!42;UBERON:0004572!1.23e-07!42;UBERON:0002020!1.25e-07!34;UBERON:0003528!1.25e-07!34;UBERON:0004872!1.40e-07!84;UBERON:0004290!1.58e-07!70;UBERON:0000914!1.87e-07!83;UBERON:0002329!1.87e-07!83;UBERON:0003077!1.87e-07!83;UBERON:0003059!1.87e-07!83;UBERON:0007282!1.87e-07!83;UBERON:0009618!1.87e-07!83;UBERON:0007285!1.87e-07!83;UBERON:0000486!1.99e-07!82;UBERON:0002791!2.79e-07!33;UBERON:0001134!2.82e-07!61;UBERON:0002036!2.82e-07!61;UBERON:0003082!2.82e-07!61;UBERON:0002385!3.91e-07!63;UBERON:0001015!3.91e-07!63;UBERON:0000383!3.91e-07!63;UBERON:0001869!7.31e-07!32;UBERON:0003102!8.44e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.69e-07;53!UBERON:0002616;2.69e-07;53 | |||
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| |||
|short_description=p4@MAP4 | |||
}} |
Latest revision as of 13:40, 18 September 2015
Short description: | p4@MAP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MAP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000360240, ENST00000383737, NM_001134364, NM_002375, NM_030885, uc003csb.2, uc003csc.3, uc003csf.3, uc003csg.2, uc011bbf.1_5end |
EntrezGene: | MAP4 |
HGNC: | 6862 |
UniProt: | P27816B9ZVR1Q86V26 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.41e-16 | 250 |
mesodermal cell | 2.46e-08 | 121 |
fibroblast | 9.30e-08 | 76 |
smooth muscle cell | 1.77e-07 | 43 |
smooth muscle myoblast | 1.77e-07 | 43 |
muscle precursor cell | 6.41e-07 | 58 |
myoblast | 6.41e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.41e-07 | 58 |
muscle cell | 6.67e-07 | 55 |