FFCP PHASE1:Hg19::chr3:51345332..51345335,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:51345332..51345335,+ | |||
|description=CAGE_peak_at_chr3:51345332..51345335,+ | |||
|id=chr3:51345332..51345335,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000228;1.81e-40;1!CL:0002372;1.81e-40;1!CL:0000056;3.26e-11;4!CL:0000737;3.26e-11;4!CL:0000680;5.86e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,9.91e-41,1;CL:0002372,9.91e-41,1;CL:0000737,2.80e-11,4;CL:0000515,2.80e-11,4 | |||
|ontology_enrichment_development_v019=CL:0000515;3.26e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.83e-44!57;UBERON:0005068!1.83e-44!57;UBERON:0006241!1.83e-44!57;UBERON:0007135!1.83e-44!57;UBERON:0002616!2.03e-37!59;UBERON:0001017!5.93e-36!82;UBERON:0002780!1.60e-35!41;UBERON:0001890!1.60e-35!41;UBERON:0006240!1.60e-35!41;UBERON:0005743!1.95e-35!86;UBERON:0003080!1.72e-34!42;UBERON:0000955!9.86e-34!69;UBERON:0006238!9.86e-34!69;UBERON:0003075!1.43e-32!86;UBERON:0007284!1.43e-32!86;UBERON:0002346!3.13e-32!90;UBERON:0001893!1.45e-31!34;UBERON:0000073!6.08e-31!94;UBERON:0001016!6.08e-31!94;UBERON:0002791!1.13e-29!33;UBERON:0002020!1.21e-28!34;UBERON:0003528!1.21e-28!34;UBERON:0001869!6.37e-28!32;UBERON:0007023!2.73e-25!115;UBERON:0003056!1.21e-24!61;UBERON:0000956!3.45e-21!25;UBERON:0000203!3.45e-21!25;UBERON:0002619!3.46e-19!22;UBERON:0001950!8.38e-19!20;UBERON:0000033!1.16e-17!123;UBERON:0000153!1.98e-17!129;UBERON:0007811!1.98e-17!129;UBERON:0000924!4.72e-14!173;UBERON:0006601!4.72e-14!173;UBERON:0004121!7.64e-14!169;UBERON:0003076!6.92e-11!15;UBERON:0003057!6.92e-11!15;UBERON:0000200!5.86e-10!6;UBERON:0002298!7.32e-10!8;UBERON:0000025!1.37e-09!194;UBERON:0002308!7.25e-09!9;UBERON:0000125!7.25e-09!9;UBERON:0004733!1.73e-08!12;UBERON:0002028!1.73e-08!12;UBERON:0007277!1.73e-08!12;UBERON:0009663!2.83e-08!7;UBERON:0001872!4.97e-08!5;UBERON:0002771!5.27e-08!3;UBERON:0004732!9.72e-08!13;UBERON:0001896!3.74e-07!3;UBERON:0005290!3.74e-07!3;UBERON:0010096!3.74e-07!3;UBERON:0000483!3.95e-07!309;UBERON:0001871!5.09e-07!7;UBERON:0000119!6.08e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001872;1.33e-32;5!UBERON:0002021;1.99e-32;5!UBERON:0001950;1.08e-30;20!UBERON:0002619;4.22e-28;22!UBERON:0000956;5.82e-25;25!UBERON:0000203;5.82e-25;25!UBERON:0001869;3.91e-18;32!UBERON:0001893;1.71e-17;34!UBERON:0002791;7.63e-17;32!UBERON:0003528;8.78e-15;34!UBERON:0002020;8.78e-15;34!UBERON:0002780;6.04e-12;41!UBERON:0001890;6.04e-12;41!UBERON:0000073;7.28e-09;53!UBERON:0002616;7.28e-09;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001872,1.44e-32,5;UBERON:0002021,2.34e-32,5;UBERON:0001950,1.22e-30,20;UBERON:0002619,4.68e-28,22;UBERON:0000956,6.39e-25,25;UBERON:0000203,6.39e-25,25;UBERON:0002791,8.18e-20,32;UBERON:0001869,8.18e-20,32;UBERON:0003528,9.96e-19,34;UBERON:0002020,9.96e-19,34;UBERON:0001893,9.96e-19,34;UBERON:0002780,9.75e-16,41;UBERON:0001890,9.75e-16,41;UBERON:0003080,9.75e-16,41;UBERON:0006240,9.75e-16,41;UBERON:0000073,2.11e-12,53;UBERON:0002616,2.11e-12,53;UBERON:0001049,8.70e-12,56;UBERON:0005068,8.70e-12,56;UBERON:0006241,8.70e-12,56;UBERON:0007135,8.70e-12,56;UBERON:0003056,6.84e-11,61;UBERON:0000955,1.01e-09,68;UBERON:0006238,1.01e-09,68;UBERON:0001017,2.69e-08,81;UBERON:0003075,2.69e-08,82;UBERON:0007284,2.69e-08,82;UBERON:0002346,6.09e-08,86;UBERON:0001016,1.53e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0.535081656179426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0.173624994933292,0,0.241192877250816,0,0.663475559587348,0.591095237907095,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0.593042257361244,0.370691816839509,0,0.337005664903385,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0.696418755514666,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.547621515567972,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.668245123238271,0,0,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.610131324509816,0.500763722825999,0.573409195690071,0.110929051536852,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0.512483037175893,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.321146125482298,0,1.11743701340006,1.02558182120378,0,0.138314504928436,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0.675375846183947,2.34323429584154,0,0.443910671357348,1.09394961803644,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0.679697329768317,0.328863867814245,0.118193840883968,0,0,0.785577949580009,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0.219881033490858,0.301925687133347,0.0771741581079447,0,0,0,0,0.392616934229891,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0.716697915757256,0,0.203974470572744,0.872701380680755,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0.0757786982182394,0,0.829169439458779,0.310298987585686,0,0.23806443146374,0,0,0.112131862580613,0,0.202117188958219,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:51345332..51345335,+ | |||
}} |
Latest revision as of 22:14, 29 July 2015
Short description: | p@chr3:51345332..51345335, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:51345332..51345335, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 9.91e-41 | 1 |
myotube | 9.91e-41 | 1 |
striated muscle cell | 2.80e-11 | 4 |
skeletal muscle myoblast | 2.80e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
parietal lobe | 1.44e-32 | 5 |
occipital lobe | 2.34e-32 | 5 |
neocortex | 1.22e-30 | 20 |
regional part of cerebral cortex | 4.68e-28 | 22 |
cerebral cortex | 6.39e-25 | 25 |
pallium | 6.39e-25 | 25 |
regional part of telencephalon | 8.18e-20 | 32 |
cerebral hemisphere | 8.18e-20 | 32 |
brain grey matter | 9.96e-19 | 34 |
gray matter | 9.96e-19 | 34 |
telencephalon | 9.96e-19 | 34 |
regional part of forebrain | 9.75e-16 | 41 |
forebrain | 9.75e-16 | 41 |
anterior neural tube | 9.75e-16 | 41 |
future forebrain | 9.75e-16 | 41 |
regional part of nervous system | 2.11e-12 | 53 |
regional part of brain | 2.11e-12 | 53 |
neural tube | 8.70e-12 | 56 |
neural rod | 8.70e-12 | 56 |
future spinal cord | 8.70e-12 | 56 |
neural keel | 8.70e-12 | 56 |
pre-chordal neural plate | 6.84e-11 | 61 |
brain | 1.01e-09 | 68 |
future brain | 1.01e-09 | 68 |
central nervous system | 2.69e-08 | 81 |
neural plate | 2.69e-08 | 82 |
presumptive neural plate | 2.69e-08 | 82 |
neurectoderm | 6.09e-08 | 86 |
nervous system | 1.53e-07 | 89 |