FFCP PHASE1:Mm9::chr14:122364320..122364338,-: Difference between revisions
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{{FFCP|EntrezGene=321019|HGNC=|MCL_coexpression_id=7|UniProt=Q3U6B2|association_with_transcript=76bp_to_ENSMUST00000049872,NM_183031,uc007vaq.1_5end|description=CAGE_peak_1_at_Gpr183_5end|id=chr14:122364320..122364338,-|ontology_enrichment_celltype=CL:0000988!1.72e-10!32;CL:0002032!1.72e-10!32;CL:0000037!1.72e-10!32;CL:0000566!1.72e-10!32;CL:0000837!1.72e-10!32;CL:0000738!3.30e-08!17;CL:0002087!3.30e-08!17;CL:0002031!7.44e-08!25;CL:0000791!1.62e-07!9;CL:0000789!1.62e-07!9;CL:0002420!1.62e-07!9;CL:0002419!1.62e-07!9;CL:0000790!1.62e-07!9;CL:0000624!7.07e-07!8|ontology_enrichment_celltype_v019_2=CL:0000988,7.91e-11,32;CL:0002032,7.91e-11,32;CL:0000037,7.91e-11,32;CL:0000837,7.91e-11,32;CL:0002031,4.04e-08,25;CL:0000738,5.80e-08,17;CL:0002087,5.80e-08,17;CL:0000791,1.15e-07,9;CL:0000789,1.15e-07,9;CL:0002420,1.15e-07,9;CL:0002419,1.15e-07,9;CL:0000790,1.15e-07,9;CL:0000624,5.21e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.15e-21!48;UBERON:0002390!2.08e-19!45;UBERON:0003061!2.08e-19!45;UBERON:0003081!2.34e-13!88;UBERON:0002405!2.23e-12!70;UBERON:0004177!7.00e-11!29;UBERON:0000926!8.05e-10!193;UBERON:0004120!8.05e-10!193;UBERON:0006603!8.05e-10!193;UBERON:0002371!1.83e-09!16;UBERON:0001474!5.49e-09!22;UBERON:0004765!5.49e-09!22;UBERON:0001434!5.49e-09!22;UBERON:0003408!2.35e-08!24;UBERON:0006562!3.97e-08!24;UBERON:0001557!3.97e-08!24;UBERON:0001042!3.97e-08!24;UBERON:0008814!3.97e-08!24;UBERON:0009145!3.97e-08!24;UBERON:0002370!5.21e-08!23;UBERON:0000974!5.21e-08!23;UBERON:0004807!5.21e-08!23;UBERON:0005058!5.21e-08!23;UBERON:0003351!5.21e-08!23;UBERON:0009113!5.21e-08!23;UBERON:0003295!5.21e-08!23;UBERON:0009722!5.21e-08!23;UBERON:0005562!5.21e-08!23;UBERON:0007690!5.21e-08!23;UBERON:0001004!7.69e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.78e-22,48;UBERON:0002405,1.78e-22,48;UBERON:0002390,2.00e-20,45;UBERON:0003061,2.00e-20,45;UBERON:0003081,3.82e-13,87;UBERON:0004177,1.27e-11,29;UBERON:0005057,1.27e-11,29;UBERON:0000926,9.43e-10,120;UBERON:0004120,9.43e-10,120;UBERON:0006603,9.43e-10,120;UBERON:0000077,1.06e-09,35;UBERON:0002371,1.16e-09,16;UBERON:0001474,2.42e-09,22;UBERON:0004765,2.42e-09,22;UBERON:0001434,2.42e-09,22;UBERON:0003408,5.28e-09,24;UBERON:0006562,9.20e-09,24;UBERON:0001557,9.20e-09,24;UBERON:0001042,9.20e-09,24;UBERON:0008814,9.20e-09,24;UBERON:0009145,9.20e-09,24;UBERON:0002370,1.20e-08,23;UBERON:0000974,1.20e-08,23;UBERON:0004807,1.20e-08,23;UBERON:0005058,1.20e-08,23;UBERON:0003351,1.20e-08,23;UBERON:0009113,1.20e-08,23;UBERON:0003295,1.20e-08,23;UBERON:0009722,1.20e-08,23;UBERON:0005562,1.20e-08,23;UBERON:0007690,1.20e-08,23;UBERON:0001004,1.89e-07,42;UBERON:0000065,3.97e-07,41|phase1_expression=2.40223270657191,0,0,0,0,0.16787927191189,0.233612640595526,60.4297153706577,470.51590943087,504.87718327654,129.269566010256,204.535815664043,268.785145991993,172.830135582358,10.9926221399169,19.8425762042029,4.89693314689703,121.137471497563,119.152442803387,92.0925544401726,2.21112554392781,0.595745707205312,0.783599367416806,20.3190376947626,17.4351053611049,0,0,0.430942465371778,1.33016393619462,0.252030129759931,0.665191531965914,0,0,0,0,0,0,5.02237956884289,4.6880120671428,7.85285615960697,0,0,1.94204141212461,0,0,0,0,0,0.219686182734472,0,0,0,129.024824058399,138.544169124167,122.674236686999,0.514518872071894,1.14613375975503,0.515672092277442,0.202316460859598,0,0.633831403506179,0,0,18.4479442042687,21.7550599764734,20.6039233334369,14.081205194365,10.373894243682,0.207379224616955,0.405017814995072,0.630974884054146,1.14260393761521,1.54607978666129,0.367472397644862,0.0958454710182364,0,3.30347642998166,1.91531007127782,1.53606533256243,0,0.182975287204819,0.52091337055676,3.90856198601933,2.25105044012672,1.37518422999129,0.294628585473668,1.56608848879013,0.372798891650601,2.57469057332826,0.0755715601067855,5.79728977403356,1.72084775396277,0,0,0.649776417447669,0,3.23022166303029,0.852151612890289,0.779358013808606,0.35333957451034,0,0,0,0,0,0,0,3.76806803072898,137.237078333001,3.11728492036132,2.60227990149204,2.13125834818499,1.38369298353635,2.11011696773672,1.29347577849275,1.0053327306374,0.741584903203122,6.2177723475562,7.07688441559899,4.52947179852746,2.20841518460394,6.30337829075789,1.86391761218122,1.17112318804619,0.41889341362691,3.0654846625031,13.7787393181808,7.19883277192089,10.9280395282836,1.49790639404823,1.37250180845588,0.628271760564322,1.39059456153821,2.30143911597297,1.66230435647648,1.29793010454206,2.03678727700633,6.96679035416521,2.27450482590307,1.89397670297827,2.21204753036596,0.459804208866946,2.16074555766419,1.20563854268572,0.476255494059295,0.896796041993948,1.03071897015702,1.03481348295606,1.72454394346274,1.70195472151037,2.46331573829528,2.84954452155847,3.05851974148158,4.179025998266,5.55611768301447,1.99034266818493,7.02213187313235,4.88961023517959,4.26245249093389,1.86413195281952,1.40715635988658,1.2604344302271,2.60419209143731,1.57411385397923,1.5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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=321019 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=Q3U6B2 | |||
|association_with_transcript=76bp_to_ENSMUST00000049872,NM_183031,uc007vaq.1_5end | |||
|cluster_id=chr14:122364320..122364338,- | |||
|description=CAGE_peak_1_at_Gpr183_5end | |||
|id=chr14:122364320..122364338,- | |||
|ontology_enrichment_celltype=CL:0000988!1.72e-10!32;CL:0002032!1.72e-10!32;CL:0000037!1.72e-10!32;CL:0000566!1.72e-10!32;CL:0000837!1.72e-10!32;CL:0000738!3.30e-08!17;CL:0002087!3.30e-08!17;CL:0002031!7.44e-08!25;CL:0000791!1.62e-07!9;CL:0000789!1.62e-07!9;CL:0002420!1.62e-07!9;CL:0002419!1.62e-07!9;CL:0000790!1.62e-07!9;CL:0000624!7.07e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.91e-11,32;CL:0002032,7.91e-11,32;CL:0000037,7.91e-11,32;CL:0000837,7.91e-11,32;CL:0002031,4.04e-08,25;CL:0000738,5.80e-08,17;CL:0002087,5.80e-08,17;CL:0000791,1.15e-07,9;CL:0000789,1.15e-07,9;CL:0002420,1.15e-07,9;CL:0002419,1.15e-07,9;CL:0000790,1.15e-07,9;CL:0000624,5.21e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.15e-21!48;UBERON:0002390!2.08e-19!45;UBERON:0003061!2.08e-19!45;UBERON:0003081!2.34e-13!88;UBERON:0002405!2.23e-12!70;UBERON:0004177!7.00e-11!29;UBERON:0000926!8.05e-10!193;UBERON:0004120!8.05e-10!193;UBERON:0006603!8.05e-10!193;UBERON:0002371!1.83e-09!16;UBERON:0001474!5.49e-09!22;UBERON:0004765!5.49e-09!22;UBERON:0001434!5.49e-09!22;UBERON:0003408!2.35e-08!24;UBERON:0006562!3.97e-08!24;UBERON:0001557!3.97e-08!24;UBERON:0001042!3.97e-08!24;UBERON:0008814!3.97e-08!24;UBERON:0009145!3.97e-08!24;UBERON:0002370!5.21e-08!23;UBERON:0000974!5.21e-08!23;UBERON:0004807!5.21e-08!23;UBERON:0005058!5.21e-08!23;UBERON:0003351!5.21e-08!23;UBERON:0009113!5.21e-08!23;UBERON:0003295!5.21e-08!23;UBERON:0009722!5.21e-08!23;UBERON:0005562!5.21e-08!23;UBERON:0007690!5.21e-08!23;UBERON:0001004!7.69e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.78e-22,48;UBERON:0002405,1.78e-22,48;UBERON:0002390,2.00e-20,45;UBERON:0003061,2.00e-20,45;UBERON:0003081,3.82e-13,87;UBERON:0004177,1.27e-11,29;UBERON:0005057,1.27e-11,29;UBERON:0000926,9.43e-10,120;UBERON:0004120,9.43e-10,120;UBERON:0006603,9.43e-10,120;UBERON:0000077,1.06e-09,35;UBERON:0002371,1.16e-09,16;UBERON:0001474,2.42e-09,22;UBERON:0004765,2.42e-09,22;UBERON:0001434,2.42e-09,22;UBERON:0003408,5.28e-09,24;UBERON:0006562,9.20e-09,24;UBERON:0001557,9.20e-09,24;UBERON:0001042,9.20e-09,24;UBERON:0008814,9.20e-09,24;UBERON:0009145,9.20e-09,24;UBERON:0002370,1.20e-08,23;UBERON:0000974,1.20e-08,23;UBERON:0004807,1.20e-08,23;UBERON:0005058,1.20e-08,23;UBERON:0003351,1.20e-08,23;UBERON:0009113,1.20e-08,23;UBERON:0003295,1.20e-08,23;UBERON:0009722,1.20e-08,23;UBERON:0005562,1.20e-08,23;UBERON:0007690,1.20e-08,23;UBERON:0001004,1.89e-07,42;UBERON:0000065,3.97e-07,41 | |||
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| |||
|short_description=p1@Gpr183 | |||
}} |
Latest revision as of 17:04, 25 September 2015
Short description: | p1@Gpr183 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gpr183_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 76bp_to_ENSMUST00000049872, NM_183031, uc007vaq.1_5end |
EntrezGene: | Gpr183 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.91e-11 | 32 |
hematopoietic oligopotent progenitor cell | 7.91e-11 | 32 |
hematopoietic stem cell | 7.91e-11 | 32 |
hematopoietic multipotent progenitor cell | 7.91e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 4.04e-08 | 25 |
leukocyte | 5.80e-08 | 17 |
nongranular leukocyte | 5.80e-08 | 17 |
mature alpha-beta T cell | 1.15e-07 | 9 |
alpha-beta T cell | 1.15e-07 | 9 |
immature T cell | 1.15e-07 | 9 |
mature T cell | 1.15e-07 | 9 |
immature alpha-beta T cell | 1.15e-07 | 9 |
CD4-positive, alpha-beta T cell | 5.21e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.78e-22 | 48 |
immune system | 1.78e-22 | 48 |
hematopoietic system | 2.00e-20 | 45 |
blood island | 2.00e-20 | 45 |
lateral plate mesoderm | 3.82e-13 | 87 |
hemopoietic organ | 1.27e-11 | 29 |
immune organ | 1.27e-11 | 29 |
mesoderm | 9.43e-10 | 120 |
mesoderm-derived structure | 9.43e-10 | 120 |
presumptive mesoderm | 9.43e-10 | 120 |
mixed endoderm/mesoderm-derived structure | 1.06e-09 | 35 |
bone marrow | 1.16e-09 | 16 |
bone element | 2.42e-09 | 22 |
skeletal element | 2.42e-09 | 22 |
skeletal system | 2.42e-09 | 22 |
gland of gut | 5.28e-09 | 24 |
pharynx | 9.20e-09 | 24 |
upper respiratory tract | 9.20e-09 | 24 |
chordate pharynx | 9.20e-09 | 24 |
pharyngeal arch system | 9.20e-09 | 24 |
pharyngeal region of foregut | 9.20e-09 | 24 |
thymus | 1.20e-08 | 23 |
neck | 1.20e-08 | 23 |
respiratory system epithelium | 1.20e-08 | 23 |
hemolymphoid system gland | 1.20e-08 | 23 |
pharyngeal epithelium | 1.20e-08 | 23 |
thymic region | 1.20e-08 | 23 |
pharyngeal gland | 1.20e-08 | 23 |
entire pharyngeal arch endoderm | 1.20e-08 | 23 |
thymus primordium | 1.20e-08 | 23 |
early pharyngeal endoderm | 1.20e-08 | 23 |
respiratory system | 1.89e-07 | 42 |
respiratory tract | 3.97e-07 | 41 |