FFCP PHASE1:Hg19::chr4:70861675..70861691,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6779 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11369 | |||
|TSSclassifier=strong | |||
|UniProt=A6NKE9 | |||
|association_with_transcript=0bp_to_ENST00000381060,ENST00000507211,ENST00000507962,ENST00000510010_5end | |||
|cluster_id=chr4:70861675..70861691,+ | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_1_at_STATH_5end | |||
|id=chr4:70861675..70861691,+ | |||
|ontology_enrichment_celltype=CL:0000359!6.21e-16!32;CL:0000192!7.65e-11!42;CL:0000514!7.65e-11!42;CL:0002595!4.16e-10!5;CL:0000187!3.54e-08!54;CL:0002539!4.45e-08!10;CL:0000680!1.76e-07!57;CL:0000056!1.76e-07!57;CL:0000355!1.76e-07!57;CL:0000183!4.64e-07!59;CL:0000393!7.33e-07!60;CL:0000211!7.33e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002595;9.94e-16;5!CL:0000359;2.62e-14;32!CL:0000192;2.49e-08;43!CL:0002593;6.40e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,1.27e-15,5;CL:0000359,3.48e-15,32;CL:0000192,1.86e-10,43;CL:0000514,1.86e-10,43;CL:0000187,1.70e-07,55;CL:0000680,5.94e-07,58;CL:0000056,5.94e-07,58;CL:0000355,5.94e-07,58;CL:0002593,8.14e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;2.49e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004573!2.74e-17!33;UBERON:0004571!2.74e-17!33;UBERON:0001637!5.38e-17!42;UBERON:0003509!5.38e-17!42;UBERON:0004572!5.38e-17!42;UBERON:0004872!4.73e-16!84;UBERON:0001981!1.92e-14!60;UBERON:0007500!1.92e-14!60;UBERON:0004537!1.92e-14!60;UBERON:0006965!1.92e-14!60;UBERON:0000055!1.07e-13!69;UBERON:0000477!2.95e-13!286;UBERON:0002049!8.29e-13!79;UBERON:0007798!8.29e-13!79;UBERON:0001009!1.20e-12!113;UBERON:0004535!2.76e-12!110;UBERON:0007023!6.43e-12!115;UBERON:0004111!1.98e-11!241;UBERON:0000078!4.52e-11!18;UBERON:0003834!4.16e-10!5;UBERON:0001533!4.16e-10!5;UBERON:0000481!6.42e-09!347;UBERON:0001042!9.05e-09!10;UBERON:0009145!9.05e-09!10;UBERON:0003914!9.87e-09!118;UBERON:0000025!1.02e-08!194;UBERON:0001134!2.44e-08!61;UBERON:0002036!2.44e-08!61;UBERON:0003082!2.44e-08!61;UBERON:0003513!3.13e-08!8;UBERON:0004237!4.45e-08!10;UBERON:0004695!4.45e-08!10;UBERON:0002111!4.45e-08!10;UBERON:0004178!4.45e-08!10;UBERON:0002385!6.74e-08!63;UBERON:0001015!6.74e-08!63;UBERON:0000383!6.74e-08!63;UBERON:0006562!7.56e-08!11;UBERON:0001557!1.34e-07!19;UBERON:0000922!5.98e-07!612;UBERON:0008814!7.77e-07!15;UBERON:0007100!7.88e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;9.94e-16;5!UBERON:0001533;9.94e-16;5!UBERON:0004573;1.28e-15;33!UBERON:0004571;1.28e-15;33!UBERON:0003513;3.97e-11;7!UBERON:0001637;1.10e-10;42!UBERON:0003509;1.10e-10;42!UBERON:0004572;1.10e-10;42!UBERON:0001044;3.34e-09;6!UBERON:0003293;3.34e-09;6!UBERON:0003294;3.34e-09;6!UBERON:0010047;3.34e-09;6!UBERON:0003408;3.34e-09;6!UBERON:0000167;3.34e-09;6!UBERON:0001829;6.06e-08;2!UBERON:0003127;8.40e-08;2!UBERON:0000341;1.93e-07;2!UBERON:0002456;6.40e-07;2!UBERON:0000078;7.00e-07;2!UBERON:0002012;7.00e-07;2!UBERON:0008886;7.00e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,5.46e-17,33;UBERON:0004571,5.46e-17,33;UBERON:0001637,1.84e-16,42;UBERON:0003509,1.84e-16,42;UBERON:0004572,1.84e-16,42;UBERON:0003834,1.27e-15,5;UBERON:0001533,1.27e-15,5;UBERON:0007500,6.65e-12,59;UBERON:0001981,6.65e-12,59;UBERON:0004537,6.65e-12,59;UBERON:0006965,6.65e-12,59;UBERON:0004872,1.16e-11,83;UBERON:0003513,4.71e-11,7;UBERON:0001042,8.92e-11,10;UBERON:0009145,8.92e-11,10;UBERON:0000055,9.29e-10,68;UBERON:0006562,9.97e-10,11;UBERON:0007023,1.44e-09,114;UBERON:0004111,2.97e-09,240;UBERON:0004145,2.97e-09,3;UBERON:0001044,3.24e-09,6;UBERON:0003293,3.24e-09,6;UBERON:0003294,3.24e-09,6;UBERON:0010047,3.24e-09,6;UBERON:0000167,3.24e-09,6;UBERON:0000166,2.96e-08,22;UBERON:0002049,5.63e-08,78;UBERON:0007798,5.63e-08,78;UBERON:0001829,6.07e-08,2;UBERON:0003408,6.56e-08,10;UBERON:0001004,6.74e-08,74;UBERON:0003127,8.40e-08,2;UBERON:0000341,1.93e-07,2;UBERON:0001009,2.31e-07,112;UBERON:0008814,2.72e-07,18;UBERON:0001557,5.89e-07,19;UBERON:0000078,7.44e-07,2;UBERON:0007497,7.44e-07,2;UBERON:0003643,7.44e-07,2;UBERON:0003504,7.44e-07,2;UBERON:0003469,7.44e-07,2;UBERON:0003496,7.44e-07,2;UBERON:0002012,7.44e-07,2;UBERON:0008886,7.44e-07,2;UBERON:0007303,7.44e-07,2;UBERON:0002061,7.44e-07,2;UBERON:0005432,7.44e-07,2;UBERON:0004363,7.44e-07,2;UBERON:0004535,8.00e-07,109;UBERON:0003914,8.06e-07,117;UBERON:0002456,8.14e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,1.2808035326455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,530.329964306831,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,23.0523172875974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,1.2663051166458,0,0.573673241497627,0,0.560677600142307,0,0,2.17847724779836,2.82892411346345,4.7403951902903,0.151357427644931,0,0,0,0,0,0,0,0,0,1.47401180774122,0,0,0,0,0,0.168336113954066,0.500474079487857,0,0,0,0,4.19699077692078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,1.07865046528132,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0.288732895522148,0,0.570762456703795,0,0,0,0,0,0,0.16798212819886,0,0,0,0,1.47798971368783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.52159065589379,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,2.78907329578371,3.46293581513704,20.911118104818,0.308033580176089,0,12.179061889051,0.9266210955196,3.57812216854978,0,0,0,0,0,1.27281299170375,1.56989728039846,0,0,0,0,0,5.47635993110675,0,22.4216410460782,1.05650146756755,0,0,2.26016233240486,15.4382296192915,129.370600172038,83.3056681982149,0,0,0.405820753925408,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78093928036649,0,0,106.996169690824,11.8802083678393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,155.75359518852,0,0,0,0,0,0,0,0,0,0,0,0,2.66866435871542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,2.14834370736859,0,0,0,0,0,0,0,0,0,0,0,4.19344003780872,0,0,0,0,9.31094558288826,0,1.80784592624426,0.137041924646751,0,5.25479606433793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,1.43574604915363,6.19004901546872,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66968531419237,1.10043013569766,3.31391244277756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0.686520205190771,0,0,0.147855149989634,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615349092722265,0,0.207471757392654,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93024367714281,0,0,0,0,359433.954147201,70.9581985096691,6.15549355258672,0,0,0,0.606965604236632,1.13831095675649,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,4.06844988788438,0,0,5.59483643240199,0,0,886341.497820771,0,0,0.423387050190929,0.4582137370881,0,0,0,0,0,0.647428837187895,0.205325613712494,0,34.971191500258,0,0,0,0,0,0,0,0.874238242015829,0,0,0,0,0,1.2679671827502,0,0,0,0,0,0,0,0,419467.10276723,0,0,0,0,5.290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,39.1227630028021,0,0,2649.85869308349,4.28515976634733,0.645889098360061,1.55186785739645,0,0,2.62752345645685,4783.01923454834,1438.40656446144,664.832115306994,1080.42330203528,769.443404690929,0,0,0,0,91.5099675373472,11.6129371973723,2.03448089157869,0,0.805095174364105,0 | |||
|short_description=p1@STATH | |||
}} |
Latest revision as of 09:04, 18 September 2015
Short description: | p1@STATH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STATH_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 0bp_to_ENST00000381060, ENST00000507211, ENST00000507962, ENST00000510010_5end |
EntrezGene: | STATH |
HGNC: | 11369 |
UniProt: | A6NKE9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.27e-15 | 5 |
vascular associated smooth muscle cell | 3.48e-15 | 32 |
smooth muscle cell | 1.86e-10 | 43 |
smooth muscle myoblast | 1.86e-10 | 43 |
muscle cell | 1.70e-07 | 55 |
muscle precursor cell | 5.94e-07 | 58 |
myoblast | 5.94e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.94e-07 | 58 |
smooth muscle cell of the internal thoracic artery | 8.14e-07 | 2 |