FFCP PHASE1:Mm9::chr16:20621427..20621494,-: Difference between revisions
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{{FFCP|EntrezGene=73047|HGNC=|MCL_coexpression_id=1|UniProt=Q78WH7|association_with_transcript=-67bp_to_ENSMUST00000052939_5end|description=CAGE_peak_2_at_Camk2n2_5end|id=chr16:20621427..20621494,-|ontology_enrichment_celltype=CL:0000117!2.46e-14!23;CL:0000337!2.46e-14!23;CL:0000221!7.74e-14!44;CL:0000133!7.74e-14!44;CL:0002319!8.55e-14!43;CL:0000540!2.05e-12!33;CL:0000047!2.05e-12!33;CL:0000031!2.05e-12!33;CL:0000404!2.05e-12!33;CL:0000055!6.41e-10!50;CL:0000393!4.60e-09!39;CL:0000211!4.60e-09!39|ontology_enrichment_celltype_v019_2=CL:0000117,2.62e-17,23;CL:0000337,2.62e-17,23;CL:0000221,1.20e-13,44;CL:0000133,1.20e-13,44;CL:0002319,1.44e-13,43;CL:0000540,6.41e-13,33;CL:0000047,6.41e-13,33;CL:0000031,6.41e-13,33;CL:0000404,6.41e-13,33;CL:0000393,9.78e-10,39;CL:0000211,9.78e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.95e-29!73;UBERON:0005743!2.95e-29!73;UBERON:0000073!5.28e-29!75;UBERON:0001016!5.28e-29!75;UBERON:0004121!7.89e-27!102;UBERON:0000924!7.89e-27!102;UBERON:0006601!7.89e-27!102;UBERON:0002346!5.95e-26!71;UBERON:0003075!5.95e-26!71;UBERON:0007284!5.95e-26!71;UBERON:0001049!5.24e-25!52;UBERON:0005068!5.24e-25!52;UBERON:0006241!5.24e-25!52;UBERON:0007135!5.24e-25!52;UBERON:0000955!3.14e-23!50;UBERON:0006238!3.14e-23!50;UBERON:0002616!1.12e-22!49;UBERON:0000033!1.19e-22!63;UBERON:0002020!3.16e-19!34;UBERON:0003056!1.33e-17!49;UBERON:0003080!1.53e-17!40;UBERON:0002780!7.96e-17!39;UBERON:0001890!7.96e-17!39;UBERON:0006240!7.96e-17!39;UBERON:0002791!1.09e-15!29;UBERON:0003528!1.09e-15!29;UBERON:0001893!1.09e-15!29;UBERON:0007811!2.77e-11!86;UBERON:0000956!4.45e-11!21;UBERON:0001869!4.45e-11!21;UBERON:0000203!4.45e-11!21;UBERON:0002619!3.46e-09!17;UBERON:0000153!5.62e-09!94;UBERON:0003076!4.13e-08!12;UBERON:0003057!4.13e-08!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.39e-32,73;UBERON:0000073,6.44e-31,54;UBERON:0001016,1.58e-30,75;UBERON:0001049,3.47e-29,52;UBERON:0005068,3.47e-29,52;UBERON:0006241,3.47e-29,52;UBERON:0007135,3.47e-29,52;UBERON:0002346,3.64e-28,64;UBERON:0003075,3.64e-28,64;UBERON:0007284,3.64e-28,64;UBERON:0004121,2.00e-25,95;UBERON:0000924,2.00e-25,95;UBERON:0006601,2.00e-25,95;UBERON:0000955,1.91e-24,47;UBERON:0006238,1.91e-24,47;UBERON:0002616,8.78e-24,46;UBERON:0002020,2.40e-23,34;UBERON:0010371,5.82e-23,73;UBERON:0003080,4.53e-20,40;UBERON:0002780,3.37e-19,39;UBERON:0001890,3.37e-19,39;UBERON:0006240,3.37e-19,39;UBERON:0003056,4.02e-19,49;UBERON:0003528,5.62e-19,29;UBERON:0002791,5.62e-19,29;UBERON:0001893,5.62e-19,29;UBERON:0010314,3.32e-18,92;UBERON:0000956,2.72e-13,21;UBERON:0001869,2.72e-13,21;UBERON:0000203,2.72e-13,21;UBERON:0002619,5.80e-11,17;UBERON:0003076,1.23e-09,12;UBERON:0003057,1.23e-09,12;UBERON:0002021,9.93e-08,10;UBERON:0000411,9.93e-08,10;UBERON:0001950,9.93e-08,10;UBERON:0002420,6.53e-07,8;UBERON:0007245,6.53e-07,8;UBERON:0010009,6.53e-07,8;UBERON:0010011,6.53e-07,8;UBERON:0000454,6.53e-07,8|phase1_expression=1.28119077683835,0.697950815278722,0.454999239389536,0.30246421130683,0.500895729946347,0.16787927191189,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,10.970584429488,0.595745707205312,0.522399578277871,0.319984845586813,0.22940928106717,0,0.430761996159075,0.215471232685889,0.380046838912748,0.252030129759931,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.734187008646726,5.47673941043627,1.74420125104357,5.05278220289285,1.94429899074283,2.37976916763116,4.31257693094915,0,0,0.336093799142464,0,0,1.54701627683233,30.3474691289397,15.869729378161,19.6487735086916,1.0165335962074,0.889294796111139,0,0.988866362566974,3.5524005747305,2.69640099466564,2.68952813725088,14.6202353354953,15.3906769698127,14.7227472945967,88.5518051651791,61.1805858435969,15.4338407010842,9.87208351487835,26.6573448116906,34.1359231098105,56.6931781098233,50.2293363747916,22.1568963386726,21.4995962465663,22.9201883044974,54.7198678042707,40.518907922281,36.213184723104,53.0331453852602,55.382583830851,43.431070877295,0.984440513331393,0.982430281388212,0,0,0.679971333707751,0.539703191637817,1.29955283489534,0,3.37066608316204,8.01022516116871,7.01422212427746,6.36011234118612,1.54927761754349,2.56652954828636,5.09610479413291,7.11066703153331,0.216491041011214,0,0,2.05530983494308,0,6.67989625791711,1.38788261412909,1.52232739156071,1.38369298353635,1.20578112442098,1.76383060703557,3.26733137457156,1.48316980640624,0.433798070759735,0,0.323533699894818,0.441683036920787,0.484875253135222,0,29.8636412951778,36.6531736923546,0.510914110417183,0.11981512450592,0,0,73.3974133083631,15.0975198930147,41.0889731409067,33.3742694769171,33.7544403676036,49.4535546051753,34.5573890334324,0.305518091550949,0.995255764880744,0.505445516867349,5.6819301089348,0.520481771850815,0.459804208866946,0.720248519221397,1.05493372485001,2.85753296435577,3.45907044769094,2.71735001223214,4.9153640440413,0.431135985865684,0.18910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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=73047 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q78WH7 | |||
|association_with_transcript=-67bp_to_ENSMUST00000052939_5end | |||
|cluster_id=chr16:20621427..20621494,- | |||
|description=CAGE_peak_2_at_Camk2n2_5end | |||
|id=chr16:20621427..20621494,- | |||
|ontology_enrichment_celltype=CL:0000117!2.46e-14!23;CL:0000337!2.46e-14!23;CL:0000221!7.74e-14!44;CL:0000133!7.74e-14!44;CL:0002319!8.55e-14!43;CL:0000540!2.05e-12!33;CL:0000047!2.05e-12!33;CL:0000031!2.05e-12!33;CL:0000404!2.05e-12!33;CL:0000055!6.41e-10!50;CL:0000393!4.60e-09!39;CL:0000211!4.60e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.62e-17,23;CL:0000337,2.62e-17,23;CL:0000221,1.20e-13,44;CL:0000133,1.20e-13,44;CL:0002319,1.44e-13,43;CL:0000540,6.41e-13,33;CL:0000047,6.41e-13,33;CL:0000031,6.41e-13,33;CL:0000404,6.41e-13,33;CL:0000393,9.78e-10,39;CL:0000211,9.78e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.95e-29!73;UBERON:0005743!2.95e-29!73;UBERON:0000073!5.28e-29!75;UBERON:0001016!5.28e-29!75;UBERON:0004121!7.89e-27!102;UBERON:0000924!7.89e-27!102;UBERON:0006601!7.89e-27!102;UBERON:0002346!5.95e-26!71;UBERON:0003075!5.95e-26!71;UBERON:0007284!5.95e-26!71;UBERON:0001049!5.24e-25!52;UBERON:0005068!5.24e-25!52;UBERON:0006241!5.24e-25!52;UBERON:0007135!5.24e-25!52;UBERON:0000955!3.14e-23!50;UBERON:0006238!3.14e-23!50;UBERON:0002616!1.12e-22!49;UBERON:0000033!1.19e-22!63;UBERON:0002020!3.16e-19!34;UBERON:0003056!1.33e-17!49;UBERON:0003080!1.53e-17!40;UBERON:0002780!7.96e-17!39;UBERON:0001890!7.96e-17!39;UBERON:0006240!7.96e-17!39;UBERON:0002791!1.09e-15!29;UBERON:0003528!1.09e-15!29;UBERON:0001893!1.09e-15!29;UBERON:0007811!2.77e-11!86;UBERON:0000956!4.45e-11!21;UBERON:0001869!4.45e-11!21;UBERON:0000203!4.45e-11!21;UBERON:0002619!3.46e-09!17;UBERON:0000153!5.62e-09!94;UBERON:0003076!4.13e-08!12;UBERON:0003057!4.13e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.39e-32,73;UBERON:0000073,6.44e-31,54;UBERON:0001016,1.58e-30,75;UBERON:0001049,3.47e-29,52;UBERON:0005068,3.47e-29,52;UBERON:0006241,3.47e-29,52;UBERON:0007135,3.47e-29,52;UBERON:0002346,3.64e-28,64;UBERON:0003075,3.64e-28,64;UBERON:0007284,3.64e-28,64;UBERON:0004121,2.00e-25,95;UBERON:0000924,2.00e-25,95;UBERON:0006601,2.00e-25,95;UBERON:0000955,1.91e-24,47;UBERON:0006238,1.91e-24,47;UBERON:0002616,8.78e-24,46;UBERON:0002020,2.40e-23,34;UBERON:0010371,5.82e-23,73;UBERON:0003080,4.53e-20,40;UBERON:0002780,3.37e-19,39;UBERON:0001890,3.37e-19,39;UBERON:0006240,3.37e-19,39;UBERON:0003056,4.02e-19,49;UBERON:0003528,5.62e-19,29;UBERON:0002791,5.62e-19,29;UBERON:0001893,5.62e-19,29;UBERON:0010314,3.32e-18,92;UBERON:0000956,2.72e-13,21;UBERON:0001869,2.72e-13,21;UBERON:0000203,2.72e-13,21;UBERON:0002619,5.80e-11,17;UBERON:0003076,1.23e-09,12;UBERON:0003057,1.23e-09,12;UBERON:0002021,9.93e-08,10;UBERON:0000411,9.93e-08,10;UBERON:0001950,9.93e-08,10;UBERON:0002420,6.53e-07,8;UBERON:0007245,6.53e-07,8;UBERON:0010009,6.53e-07,8;UBERON:0010011,6.53e-07,8;UBERON:0000454,6.53e-07,8 | |||
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| |||
|short_description=p2@Camk2n2 | |||
}} |
Latest revision as of 18:00, 1 October 2015
Short description: | p2@Camk2n2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Camk2n2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -67bp_to_ENSMUST00000052939_5end |
EntrezGene: | Camk2n2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.62e-17 | 23 |
neuroblast (sensu Vertebrata) | 2.62e-17 | 23 |
ectodermal cell | 1.20e-13 | 44 |
neurectodermal cell | 1.20e-13 | 44 |
neural cell | 1.44e-13 | 43 |
neuron | 6.41e-13 | 33 |
neuronal stem cell | 6.41e-13 | 33 |
neuroblast | 6.41e-13 | 33 |
electrically signaling cell | 6.41e-13 | 33 |
electrically responsive cell | 9.78e-10 | 39 |
electrically active cell | 9.78e-10 | 39 |