FFCP PHASE1:Mm9::chr16:44332738..44332781,-: Difference between revisions
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{{FFCP|EntrezGene=320007|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=-84bp_to_ENSMUST00000124651_5end|description=CAGE_peak_2_at_Sidt1_5end|id=chr16:44332738..44332781,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,2.31e-07,23;CL:0000337,2.31e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!6.35e-20!86;UBERON:0000153!8.15e-18!94;UBERON:0001049!2.03e-15!52;UBERON:0005068!2.03e-15!52;UBERON:0006241!2.03e-15!52;UBERON:0007135!2.03e-15!52;UBERON:0002346!1.31e-14!71;UBERON:0003075!1.31e-14!71;UBERON:0007284!1.31e-14!71;UBERON:0000955!4.56e-14!50;UBERON:0006238!4.56e-14!50;UBERON:0000033!7.09e-14!63;UBERON:0002616!1.55e-13!49;UBERON:0004121!3.02e-11!102;UBERON:0000924!3.02e-11!102;UBERON:0006601!3.02e-11!102;UBERON:0001017!8.18e-11!73;UBERON:0005743!8.18e-11!73;UBERON:0002020!1.62e-10!34;UBERON:0003080!1.82e-10!40;UBERON:0003056!5.36e-10!49;UBERON:0002780!6.20e-10!39;UBERON:0001890!6.20e-10!39;UBERON:0006240!6.20e-10!39;UBERON:0000073!7.80e-10!75;UBERON:0001016!7.80e-10!75;UBERON:0000064!1.82e-08!99;UBERON:0002021!2.74e-08!10;UBERON:0000411!2.74e-08!10;UBERON:0001950!2.74e-08!10;UBERON:0002791!1.28e-07!29;UBERON:0003528!1.28e-07!29;UBERON:0001893!1.28e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.05e-21,54;UBERON:0001049,6.03e-20,52;UBERON:0005068,6.03e-20,52;UBERON:0006241,6.03e-20,52;UBERON:0007135,6.03e-20,52;UBERON:0001017,2.46e-16,73;UBERON:0002346,5.71e-16,64;UBERON:0003075,5.71e-16,64;UBERON:0007284,5.71e-16,64;UBERON:0000955,6.67e-16,47;UBERON:0006238,6.67e-16,47;UBERON:0001016,1.94e-15,75;UBERON:0002616,3.33e-15,46;UBERON:0010371,6.51e-13,73;UBERON:0002020,6.96e-13,34;UBERON:0003080,7.81e-13,40;UBERON:0004121,9.37e-13,95;UBERON:0000924,9.37e-13,95;UBERON:0006601,9.37e-13,95;UBERON:0002780,4.06e-12,39;UBERON:0001890,4.06e-12,39;UBERON:0006240,4.06e-12,39;UBERON:0003056,6.53e-11,49;UBERON:0002021,7.42e-11,10;UBERON:0000411,7.42e-11,10;UBERON:0001950,7.42e-11,10;UBERON:0010314,8.23e-11,92;UBERON:0003408,2.38e-09,24;UBERON:0003528,5.19e-09,29;UBERON:0002791,5.19e-09,29;UBERON:0001893,5.19e-09,29;UBERON:0006562,8.63e-09,24;UBERON:0001557,8.63e-09,24;UBERON:0001042,8.63e-09,24;UBERON:0008814,8.63e-09,24;UBERON:0009145,8.63e-09,24;UBERON:0002370,1.32e-08,23;UBERON:0000974,1.32e-08,23;UBERON:0004807,1.32e-08,23;UBERON:0005058,1.32e-08,23;UBERON:0003351,1.32e-08,23;UBERON:0009113,1.32e-08,23;UBERON:0003295,1.32e-08,23;UBERON:0009722,1.32e-08,23;UBERON:0005562,1.32e-08,23;UBERON:0007690,1.32e-08,23;UBERON:0003076,2.83e-08,12;UBERON:0003057,2.83e-08,12;UBERON:0002619,2.36e-07,17;UBERON:0000072,3.95e-07,27|phase1_expression=0.480446541314382,0,0,0,0,1.34303417529512,1.16806320297763,3.22808308603941,0.140788722151667,2.57470978954193,2.22583358693156,5.66382328866889,2.22560948910567,3.3219752919219,0.333109761815663,0.404950534779652,0.699561878128147,0.630924330716475,0.959801035240171,0.42438965179803,2.04103896362567,0,0,0,0.45881856213434,0,0,0.215471232685889,0.570070258369122,1.00812051903972,0.886922042621219,0,0,0,0.577703239502549,0.664938581433969,1.63335485009895,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0.699932108126813,0,0.335565212115473,2.90144856804538,12.4354705682712,0,0,0,1.41621522601718,2.11596391708813,3.1691570175309,0,0.889294796111139,0,0,0,0,0,0.725827286159344,0.540023753326763,0.420649922702764,11.4260393761521,14.5773237028065,0,0.191690942036473,0,6.60695285996332,7.40586560894089,5.37622866396852,1.31886287730194,1.82975287204819,1.56274011167028,2.79182999001381,7.87867654044352,8.09830713217094,20.6240009831567,17.3693450574906,5.40558392893372,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0.649473123033642,0,0,0.5709193985953,5.17875767294343,3.41416919849097,1.04091196059682,1.52232739156071,1.15307748628029,1.20578112442098,1.41106448562846,1.63366568728578,0,0.86759614151947,0,0,0,0,0,7.31951992528868,8.58731497935166,0,0.11981512450592,0,0,7.48953197024113,4.11750542536764,0.502617408451458,11.4724051326902,8.69432554923124,4.98691306942944,6.16516799657479,0,0,0,4.20883711772948,0.130120442962704,0,0.540186389416048,0.30140963567143,0.272145996605311,1.0249097622788,0.843315521037559,2.06962696591213,0,0.189106080167819,0.175951124163949,0.43839146485515,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0.324275238183423,0,0.219550115291051,0.134206418760372,14.2997165023607,4.21908910755066,0,0.264450566663544,0,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.994782360205754,0.19496408711912,0,0.216138049874694,0.398282546508734,0.189667900953082,0.571242563048644,1.1270773567308,0,0.193952487167626,0.420814919341911,0.189709611372772,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.923765950833023,0.189491411770485,0,0,0,0.335012514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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320007 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-84bp_to_ENSMUST00000124651_5end | |||
|cluster_id=chr16:44332738..44332781,- | |||
|description=CAGE_peak_2_at_Sidt1_5end | |||
|id=chr16:44332738..44332781,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.31e-07,23;CL:0000337,2.31e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!6.35e-20!86;UBERON:0000153!8.15e-18!94;UBERON:0001049!2.03e-15!52;UBERON:0005068!2.03e-15!52;UBERON:0006241!2.03e-15!52;UBERON:0007135!2.03e-15!52;UBERON:0002346!1.31e-14!71;UBERON:0003075!1.31e-14!71;UBERON:0007284!1.31e-14!71;UBERON:0000955!4.56e-14!50;UBERON:0006238!4.56e-14!50;UBERON:0000033!7.09e-14!63;UBERON:0002616!1.55e-13!49;UBERON:0004121!3.02e-11!102;UBERON:0000924!3.02e-11!102;UBERON:0006601!3.02e-11!102;UBERON:0001017!8.18e-11!73;UBERON:0005743!8.18e-11!73;UBERON:0002020!1.62e-10!34;UBERON:0003080!1.82e-10!40;UBERON:0003056!5.36e-10!49;UBERON:0002780!6.20e-10!39;UBERON:0001890!6.20e-10!39;UBERON:0006240!6.20e-10!39;UBERON:0000073!7.80e-10!75;UBERON:0001016!7.80e-10!75;UBERON:0000064!1.82e-08!99;UBERON:0002021!2.74e-08!10;UBERON:0000411!2.74e-08!10;UBERON:0001950!2.74e-08!10;UBERON:0002791!1.28e-07!29;UBERON:0003528!1.28e-07!29;UBERON:0001893!1.28e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.05e-21,54;UBERON:0001049,6.03e-20,52;UBERON:0005068,6.03e-20,52;UBERON:0006241,6.03e-20,52;UBERON:0007135,6.03e-20,52;UBERON:0001017,2.46e-16,73;UBERON:0002346,5.71e-16,64;UBERON:0003075,5.71e-16,64;UBERON:0007284,5.71e-16,64;UBERON:0000955,6.67e-16,47;UBERON:0006238,6.67e-16,47;UBERON:0001016,1.94e-15,75;UBERON:0002616,3.33e-15,46;UBERON:0010371,6.51e-13,73;UBERON:0002020,6.96e-13,34;UBERON:0003080,7.81e-13,40;UBERON:0004121,9.37e-13,95;UBERON:0000924,9.37e-13,95;UBERON:0006601,9.37e-13,95;UBERON:0002780,4.06e-12,39;UBERON:0001890,4.06e-12,39;UBERON:0006240,4.06e-12,39;UBERON:0003056,6.53e-11,49;UBERON:0002021,7.42e-11,10;UBERON:0000411,7.42e-11,10;UBERON:0001950,7.42e-11,10;UBERON:0010314,8.23e-11,92;UBERON:0003408,2.38e-09,24;UBERON:0003528,5.19e-09,29;UBERON:0002791,5.19e-09,29;UBERON:0001893,5.19e-09,29;UBERON:0006562,8.63e-09,24;UBERON:0001557,8.63e-09,24;UBERON:0001042,8.63e-09,24;UBERON:0008814,8.63e-09,24;UBERON:0009145,8.63e-09,24;UBERON:0002370,1.32e-08,23;UBERON:0000974,1.32e-08,23;UBERON:0004807,1.32e-08,23;UBERON:0005058,1.32e-08,23;UBERON:0003351,1.32e-08,23;UBERON:0009113,1.32e-08,23;UBERON:0003295,1.32e-08,23;UBERON:0009722,1.32e-08,23;UBERON:0005562,1.32e-08,23;UBERON:0007690,1.32e-08,23;UBERON:0003076,2.83e-08,12;UBERON:0003057,2.83e-08,12;UBERON:0002619,2.36e-07,17;UBERON:0000072,3.95e-07,27 | |||
|phase1_expression=0.480446541314382,0,0,0,0,1.34303417529512,1.16806320297763,3.22808308603941,0.140788722151667,2.57470978954193,2.22583358693156,5.66382328866889,2.22560948910567,3.3219752919219,0.333109761815663,0.404950534779652,0.699561878128147,0.630924330716475,0.959801035240171,0.42438965179803,2.04103896362567,0,0,0,0.45881856213434,0,0,0.215471232685889,0.570070258369122,1.00812051903972,0.886922042621219,0,0,0,0.577703239502549,0.664938581433969,1.63335485009895,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0.699932108126813,0,0.335565212115473,2.90144856804538,12.4354705682712,0,0,0,1.41621522601718,2.11596391708813,3.1691570175309,0,0.889294796111139,0,0,0,0,0,0.725827286159344,0.540023753326763,0.420649922702764,11.4260393761521,14.5773237028065,0,0.191690942036473,0,6.60695285996332,7.40586560894089,5.37622866396852,1.31886287730194,1.82975287204819,1.56274011167028,2.79182999001381,7.87867654044352,8.09830713217094,20.6240009831567,17.3693450574906,5.40558392893372,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0.649473123033642,0,0,0.5709193985953,5.17875767294343,3.41416919849097,1.04091196059682,1.52232739156071,1.15307748628029,1.20578112442098,1.41106448562846,1.63366568728578,0,0.86759614151947,0,0,0,0,0,7.31951992528868,8.58731497935166,0,0.11981512450592,0,0,7.48953197024113,4.11750542536764,0.502617408451458,11.4724051326902,8.69432554923124,4.98691306942944,6.16516799657479,0,0,0,4.20883711772948,0.130120442962704,0,0.540186389416048,0.30140963567143,0.272145996605311,1.0249097622788,0.843315521037559,2.06962696591213,0,0.189106080167819,0.175951124163949,0.43839146485515,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0.324275238183423,0,0.219550115291051,0.134206418760372,14.2997165023607,4.21908910755066,0,0.264450566663544,0,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.994782360205754,0.19496408711912,0,0.216138049874694,0.398282546508734,0.189667900953082,0.571242563048644,1.1270773567308,0,0.193952487167626,0.420814919341911,0.189709611372772,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.923765950833023,0.189491411770485,0,0,0,0.335012514883631,0.476087281772027,0.195133647857799,0.315270288212382,0.221464689648775,0.159454768657487,0.327726629431476,0.345369963731791,0.578596234326046,0,0,0.491764273019036,2.48343071674259,4.17431533968259,3.16471553798949,0,0,0,0,0,0,0,0,0,0,0,6.10510501201433,0.141940085208269,0.35613120733451,0.488660878060728,0.659880491890142,0,0,0,0.754420319023592,1.18120757152309,0.614870295887855,0.258428293168221,0.363533729477506,0,0,0,0,0,0.36012218806262,1.03486947026204,2.14337035031592,6.20690817747958,3.92411398724555,4.77192159746151,3.65357938937519,0.23467170806371,0,3.52845436887939,0.32977250588296,0.161464426695906,0.301564624640779,0.119372344003136,0.164140899745061,0.291480836629851,2.78137953015765,1.02522528478712,0.206386867963223,0.370389054739423,0,0.546776910884101,0.228778173206523,0.169978429993855,0.139951452323658,0,1.90934123603023,0,0.203319467126849,0.756037385752609,0.836353184057875,0.436725127492355,1.21377911746339,1.40510874733071,1.83229159388821,0.518459893167171,10.5627683224777,0,0,0,0,0,0,0,0,0,0,0,4.74016680942267,1.62180172232131,5.13554785824136,2.85825810551149,6.26593434836185,6.55648470778174,4.08664528367894,2.21534290761866,2.62512769865184,2.89585865288999,1.41156659191577,3.50848370663109,2.69393156592922,7.24636793525727,1.13365191807606,0,0,0,5.79568782096571,0.187682475451182,0.73260649706906,0.428736758158132,2.50786052017682,13.5540442228096,17.4923589872727,16.0410743763031,15.1230800462445,20.5524755931193,11.3309084608455,14.1754725048679,11.7083512838297,11.3285602246051,16.5683299760582,0,0.798049746802062,1.02440163452481,1.45864030240976,0.419226325255965,0.551530525350042,1.11123363900808,1.64828045791115,1.60459604795908,0.505394423527595,1.01391719956096,0.565879024158229,1.21733959710847,1.85672941974121,1.09127391015665,1.42888107384922,1.39061191133827,0.578727661391115,2.88460130562315,1.47198920134397,2.40008476669791,1.77475806159337,2.14592570952589,1.59881058295561,1.59985946706062,1.60767754994185,0.914639864363863,2.36762740294059,0.814824683075171,0.561142271657738,1.66089025373844,0.886540341380071,0.818462086339379,1.85924209423159,0.385813221962283,2.24829520144151,0.701794825336225,1.28922632428979,1.14772999241306,0.661774257358546,0.695603506861264 | |||
|short_description=p2@Sidt1 | |||
}} |
Latest revision as of 13:52, 25 September 2015
Short description: | p2@Sidt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sidt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -84bp_to_ENSMUST00000124651_5end |
EntrezGene: | Sidt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.31e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.31e-07 | 23 |