FFCP PHASE1:Mm9::chr16:55934958..55934981,-: Difference between revisions
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{{FFCP|EntrezGene=74201|HGNC=|MCL_coexpression_id=113|UniProt=Q9CZ62,Q8BH46,Q6P077,Q8BJR7|association_with_transcript=0bp_to_ENSMUST00000023270,ENSMUST00000121129,NM_001159364,NM_001159365,NM_001159366,NM_028815,uc007zlr.2,uc007zls.1,uc007zlt.2,uc007zlu.2_5end|description=CAGE_peak_2_at_Cep97_5end|id=chr16:55934958..55934981,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!2.83e-21!94;UBERON:0007811!4.93e-19!86;UBERON:0000033!1.56e-13!63;UBERON:0002346!6.50e-12!71;UBERON:0003075!6.50e-12!71;UBERON:0007284!6.50e-12!71;UBERON:0003056!1.68e-11!49;UBERON:0000955!2.12e-11!50;UBERON:0006238!2.12e-11!50;UBERON:0001017!2.39e-11!73;UBERON:0005743!2.39e-11!73;UBERON:0000073!3.65e-11!75;UBERON:0001016!3.65e-11!75;UBERON:0004121!3.86e-11!102;UBERON:0000924!3.86e-11!102;UBERON:0006601!3.86e-11!102;UBERON:0002616!7.06e-11!49;UBERON:0001049!6.92e-09!52;UBERON:0005068!6.92e-09!52;UBERON:0006241!6.92e-09!52;UBERON:0007135!6.92e-09!52;UBERON:0003080!9.06e-09!40;UBERON:0002780!2.94e-08!39;UBERON:0001890!2.94e-08!39;UBERON:0006240!2.94e-08!39;UBERON:0002791!6.48e-07!29;UBERON:0003528!6.48e-07!29;UBERON:0001893!6.48e-07!29;UBERON:0000475!6.60e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.17e-12,64;UBERON:0003075,1.17e-12,64;UBERON:0007284,1.17e-12,64;UBERON:0003056,1.54e-11,49;UBERON:0010371,1.77e-11,73;UBERON:0004121,2.26e-11,95;UBERON:0000924,2.26e-11,95;UBERON:0006601,2.26e-11,95;UBERON:0001017,2.49e-11,73;UBERON:0001016,3.79e-11,75;UBERON:0000955,4.98e-10,47;UBERON:0006238,4.98e-10,47;UBERON:0000073,7.21e-10,54;UBERON:0002616,1.58e-09,46;UBERON:0010314,5.54e-09,92;UBERON:0001049,5.69e-09,52;UBERON:0005068,5.69e-09,52;UBERON:0006241,5.69e-09,52;UBERON:0007135,5.69e-09,52;UBERON:0003080,8.40e-09,40;UBERON:0000153,1.28e-08,43;UBERON:0002780,2.73e-08,39;UBERON:0001890,2.73e-08,39;UBERON:0006240,2.73e-08,39;UBERON:0007811,3.22e-07,36;UBERON:0003528,6.03e-07,29;UBERON:0002791,6.03e-07,29;UBERON:0001893,6.03e-07,29|phase1_expression=4.64431656603902,0,0.454999239389536,0,0,0.503637815735669,1.16806320297763,6.19791952519566,0.84473233291,1.87251621057595,0.856089841127525,0.717949430958028,8.73123722649149,6.55653018142481,2.6648780945253,4.85940641735582,6.29605690315332,4.25873923233621,3.83920414096069,5.51706547337439,3.23164502574065,5.56029326724958,7.05239430675126,1.27993938234725,1.14704640533585,0.57423196411502,0,0.215471232685889,0.760093677825496,0.756090389279792,0.443461021310609,6.98533740805594,3.69038872550742,15.8481681015439,2.88851619751275,0.831173226792462,1.63335485009895,1.25559489221072,0.7813353445238,0.523523743973798,1.17646297606203,1.36609096991689,1.45653105909346,3.9028013572429,3.4468156614635,2.56965453026354,0,1.96222640742402,0.439372365468944,1.1665793944457,1.1198913730029,1.43752564364972,3.52343472721246,8.70434570413613,9.07453257684653,1.28629718017973,2.57880095944881,1.54701627683233,3.84401275633236,8.46385566835253,3.1691570175309,0.338844532069132,2.66788438833342,0,0,0.7104801149461,0.898800331555214,0.768436610643109,6.73982480005105,5.13022565660425,5.25812403378455,1.14260393761521,1.54607978666129,7.4719387521122,4.31304619582064,5.51531271966013,14.3150645299205,7.66124028511126,9.06278546211836,3.29715719325485,3.7509933876988,3.64639359389732,5.02529398202486,5.06486349028512,6.72312290217964,5.59794312399969,3.27454865837937,4.47358669980721,3.55913108665965,3.40072020480535,2.6087803983151,2.58127163094416,1.3599426674155,0.539703191637817,2.59910566979068,2.68816132258401,1.96622188184453,2.89731548382698,2.85764605063156,0.35333957451034,6.61964072950398,5.13305909657271,5.09610479413291,7.11066703153331,0.649473123033642,0.506719730950197,1.01104889002957,1.59857431606684,5.69663344023778,3.56261133755579,3.46970653532272,6.08930956624282,1.61430848079241,4.06951129492081,5.52666923537813,1.63366568728578,0.741584903203122,3.47038456607788,2.65383165584962,1.7794353494215,2.20841518460394,2.42437626567611,0,13.7606974595427,10.4723353406728,1.53274233125155,2.87556298814209,5.39912457894067,2.92261522268049,11.5338792341713,10.5225138648284,7.413606774659,9.03886464999838,5.37002460393694,10.8049783170971,9.89671704713322,3.7680564624617,3.73220911830279,3.53811861807145,2.31486041475121,8.19758790665033,6.43725892413724,5.40186389416048,7.38453607395004,8.57259889306731,11.0177799444971,8.52685693493532,7.24369438069244,4.52692785158969,10.2117283290622,5.10258260075452,3.94552318369635,7.50727572909114,5.57203466435466,4.11564272815887,5.17489093728082,3.51106593656617,3.08817488537658,1.42081749697796,4.55676699578104,4.22146907965973,5.40186184383045,5.20838418287463,3.93528463494808,4.62801338662135,3.95307706075693,2.68273401399619,2.6856028744449,2.46839774870221,1.47750717671186,1.54030738137126,2.19299981137998,2.63460138349261,2.41571553768669,9.2527577368216,5.55684906848136,0.330418782983798,1.32225283331772,6.61193576659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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74201 | |||
|HGNC= | |||
|MCL_coexpression_id=113 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CZ62,Q8BH46,Q6P077,Q8BJR7 | |||
|association_with_transcript=0bp_to_ENSMUST00000023270,ENSMUST00000121129,NM_001159364,NM_001159365,NM_001159366,NM_028815,uc007zlr.2,uc007zls.1,uc007zlt.2,uc007zlu.2_5end | |||
|cluster_id=chr16:55934958..55934981,- | |||
|description=CAGE_peak_2_at_Cep97_5end | |||
|id=chr16:55934958..55934981,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.83e-21!94;UBERON:0007811!4.93e-19!86;UBERON:0000033!1.56e-13!63;UBERON:0002346!6.50e-12!71;UBERON:0003075!6.50e-12!71;UBERON:0007284!6.50e-12!71;UBERON:0003056!1.68e-11!49;UBERON:0000955!2.12e-11!50;UBERON:0006238!2.12e-11!50;UBERON:0001017!2.39e-11!73;UBERON:0005743!2.39e-11!73;UBERON:0000073!3.65e-11!75;UBERON:0001016!3.65e-11!75;UBERON:0004121!3.86e-11!102;UBERON:0000924!3.86e-11!102;UBERON:0006601!3.86e-11!102;UBERON:0002616!7.06e-11!49;UBERON:0001049!6.92e-09!52;UBERON:0005068!6.92e-09!52;UBERON:0006241!6.92e-09!52;UBERON:0007135!6.92e-09!52;UBERON:0003080!9.06e-09!40;UBERON:0002780!2.94e-08!39;UBERON:0001890!2.94e-08!39;UBERON:0006240!2.94e-08!39;UBERON:0002791!6.48e-07!29;UBERON:0003528!6.48e-07!29;UBERON:0001893!6.48e-07!29;UBERON:0000475!6.60e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.17e-12,64;UBERON:0003075,1.17e-12,64;UBERON:0007284,1.17e-12,64;UBERON:0003056,1.54e-11,49;UBERON:0010371,1.77e-11,73;UBERON:0004121,2.26e-11,95;UBERON:0000924,2.26e-11,95;UBERON:0006601,2.26e-11,95;UBERON:0001017,2.49e-11,73;UBERON:0001016,3.79e-11,75;UBERON:0000955,4.98e-10,47;UBERON:0006238,4.98e-10,47;UBERON:0000073,7.21e-10,54;UBERON:0002616,1.58e-09,46;UBERON:0010314,5.54e-09,92;UBERON:0001049,5.69e-09,52;UBERON:0005068,5.69e-09,52;UBERON:0006241,5.69e-09,52;UBERON:0007135,5.69e-09,52;UBERON:0003080,8.40e-09,40;UBERON:0000153,1.28e-08,43;UBERON:0002780,2.73e-08,39;UBERON:0001890,2.73e-08,39;UBERON:0006240,2.73e-08,39;UBERON:0007811,3.22e-07,36;UBERON:0003528,6.03e-07,29;UBERON:0002791,6.03e-07,29;UBERON:0001893,6.03e-07,29 | |||
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| |||
|short_description=p2@Cep97 | |||
}} |
Latest revision as of 16:16, 25 September 2015
Short description: | p2@Cep97 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cep97_5end |
Coexpression cluster: | MCL_coexpression_mm9:113 |
Association with transcript: | 0bp_to_ENSMUST00000023270, ENSMUST00000121129, NM_001159364, NM_001159365, NM_001159366, NM_028815, uc007zlr.2, uc007zls.1, uc007zlt.2, uc007zlu.2_5end |
EntrezGene: | Cep97 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.17e-12 | 64 |
neural plate | 1.17e-12 | 64 |
presumptive neural plate | 1.17e-12 | 64 |
pre-chordal neural plate | 1.54e-11 | 49 |
ecto-epithelium | 1.77e-11 | 73 |
ectoderm-derived structure | 2.26e-11 | 95 |
ectoderm | 2.26e-11 | 95 |
presumptive ectoderm | 2.26e-11 | 95 |
central nervous system | 2.49e-11 | 73 |
nervous system | 3.79e-11 | 75 |
brain | 4.98e-10 | 47 |
future brain | 4.98e-10 | 47 |
regional part of nervous system | 7.21e-10 | 54 |
regional part of brain | 1.58e-09 | 46 |
structure with developmental contribution from neural crest | 5.54e-09 | 92 |
neural tube | 5.69e-09 | 52 |
neural rod | 5.69e-09 | 52 |
future spinal cord | 5.69e-09 | 52 |
neural keel | 5.69e-09 | 52 |
anterior neural tube | 8.40e-09 | 40 |
anterior region of body | 1.28e-08 | 43 |
regional part of forebrain | 2.73e-08 | 39 |
forebrain | 2.73e-08 | 39 |
future forebrain | 2.73e-08 | 39 |
craniocervical region | 3.22e-07 | 36 |
brain grey matter | 6.03e-07 | 29 |
regional part of telencephalon | 6.03e-07 | 29 |
telencephalon | 6.03e-07 | 29 |