FFCP PHASE1:Mm9::chr17:26698406..26698419,+: Difference between revisions
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{{FFCP|EntrezGene=67458|HGNC=|MCL_coexpression_id=13|UniProt=Q9DC16|association_with_transcript=-14bp_to_ENSMUST00000167662_5end|description=CAGE_peak_3_at_Ergic1_5end|id=chr17:26698406..26698419,+|ontology_enrichment_celltype=CL:0000117!1.56e-11!23;CL:0000337!1.56e-11!23;CL:0000055!8.36e-10!50;CL:0000221!1.15e-09!44;CL:0000133!1.15e-09!44;CL:0002319!1.77e-09!43;CL:0000393!9.90e-07!39;CL:0000211!9.90e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,3.51e-12,23;CL:0000337,3.51e-12,23;CL:0000221,1.55e-09,44;CL:0000133,1.55e-09,44;CL:0002319,2.45e-09,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.71e-23!52;UBERON:0005068!1.71e-23!52;UBERON:0006241!1.71e-23!52;UBERON:0007135!1.71e-23!52;UBERON:0001017!6.91e-23!73;UBERON:0005743!6.91e-23!73;UBERON:0000955!2.54e-22!50;UBERON:0006238!2.54e-22!50;UBERON:0000073!2.68e-22!75;UBERON:0001016!2.68e-22!75;UBERON:0002616!7.65e-22!49;UBERON:0002020!7.40e-20!34;UBERON:0003080!2.90e-19!40;UBERON:0002780!5.77e-19!39;UBERON:0001890!5.77e-19!39;UBERON:0006240!5.77e-19!39;UBERON:0000033!4.46e-18!63;UBERON:0002791!2.76e-17!29;UBERON:0003528!2.76e-17!29;UBERON:0001893!2.76e-17!29;UBERON:0004121!1.79e-16!102;UBERON:0000924!1.79e-16!102;UBERON:0006601!1.79e-16!102;UBERON:0002346!2.86e-16!71;UBERON:0003075!2.86e-16!71;UBERON:0007284!2.86e-16!71;UBERON:0003056!7.40e-16!49;UBERON:0000153!1.19e-13!94;UBERON:0007811!4.87e-13!86;UBERON:0000956!1.10e-12!21;UBERON:0001869!1.10e-12!21;UBERON:0000203!1.10e-12!21;UBERON:0002619!1.69e-10!17;UBERON:0000025!2.26e-08!114;UBERON:0004111!7.81e-08!122;UBERON:0002021!3.05e-07!10;UBERON:0000411!3.05e-07!10;UBERON:0001950!3.05e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.00e-26,54;UBERON:0001049,6.37e-25,52;UBERON:0005068,6.37e-25,52;UBERON:0006241,6.37e-25,52;UBERON:0007135,6.37e-25,52;UBERON:0001017,1.40e-23,73;UBERON:0001016,8.42e-23,75;UBERON:0000955,2.79e-22,47;UBERON:0006238,2.79e-22,47;UBERON:0002616,8.84e-22,46;UBERON:0002020,4.76e-21,34;UBERON:0003080,2.04e-20,40;UBERON:0002780,4.25e-20,39;UBERON:0001890,4.25e-20,39;UBERON:0006240,4.25e-20,39;UBERON:0003528,2.62e-18,29;UBERON:0002791,2.62e-18,29;UBERON:0001893,2.62e-18,29;UBERON:0002346,2.84e-18,64;UBERON:0003075,2.84e-18,64;UBERON:0007284,2.84e-18,64;UBERON:0004121,3.39e-17,95;UBERON:0000924,3.39e-17,95;UBERON:0006601,3.39e-17,95;UBERON:0003056,4.17e-16,49;UBERON:0010371,1.74e-15,73;UBERON:0010314,2.05e-15,92;UBERON:0000956,2.09e-13,21;UBERON:0001869,2.09e-13,21;UBERON:0000203,2.09e-13,21;UBERON:0002619,4.44e-11,17;UBERON:0000025,1.73e-08,114;UBERON:0004111,5.23e-08,122;UBERON:0002021,1.30e-07,10;UBERON:0000411,1.30e-07,10;UBERON:0001950,1.30e-07,10|phase1_expression=1.28119077683835,0.697950815278722,0,0.30246421130683,2.50447864973174,0.503637815735669,1.86890112476421,1.16210991097419,0,0,0.68487187290202,0.558405112967355,0.171200729931206,0.0874204024189974,0,0,0.699561878128147,0.630924330716475,0.137114433605739,0,1.9559956734746,0,0,1.11994695955385,1.60586496747019,0,0.430761996159075,0,0.950117097281869,0.252030129759931,0,0,0.61506478758457,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0.485510353031154,1.25896817975577,1.21652317463417,1.65192076945513,5.47673941043627,2.18025156380447,4.61340983742391,3.4997381833371,6.29938897314131,4.31257693094915,0.167782606057736,0.725362142011344,0,1.80081605225163,1.43266719969378,2.57836046138721,3.84401275633236,1.5869729378161,3.80298842103708,5.42151251310611,6.22506357277798,0.899899717281399,2.96659908770092,2.8419204597844,4.49400165777607,3.45796474789399,3.31806759387129,5.26523159493594,5.46844899513593,4.28476476605705,5.07997644188711,4.89963196859816,7.28425579738596,1.83843757322004,2.20231761998777,3.70293280447044,3.5329502648936,4.08847491963601,7.22752384459036,6.25096044668112,2.23346399201105,4.50210088025344,4.27835093775068,2.65165726926301,4.27115042397309,4.10078780815661,0.681535739998656,1.5870027622425,3.47837386442013,1.72084775396277,0.679971333707751,1.07940638327563,0.649776417447669,1.34408066129201,0.983110940922263,0.681721290312231,1.03914401841148,1.06001872353102,1.97180787687353,1.28326477414318,0,7.11066703153331,1.29894624606728,1.26679932737549,1.51657333504435,0.79928715803342,0.776813650941515,1.33597925158342,2.08182392119363,0,1.38369298353635,0.904335843315735,0.940709657085638,1.13099932196708,1.97755974187499,0.578397427679647,0.884610551949874,1.61766849947409,0.220841518460394,0,1.86391761218122,1.46390398505774,2.30391377494801,0.510914110417183,0.479260498023681,0,0.254140454146129,2.39665023047716,10.0650132620098,9.04711335212624,5.38855392596057,4.60287823194595,3.32460871295296,4.86723789203273,3.86989582631202,0.870848794270651,5.81262344397452,0.631325567659422,1.04096354370163,0.689706313300419,1.80062129805349,2.56198190320716,1.56483948048054,0.640568601424249,1.21812241927647,0.776110112217047,1.94011193639558,2.26927296201383,2.11141348996739,3.06874025398605,1.11218899690239,1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67458 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DC16 | |||
|association_with_transcript=-14bp_to_ENSMUST00000167662_5end | |||
|cluster_id=chr17:26698406..26698419,+ | |||
|description=CAGE_peak_3_at_Ergic1_5end | |||
|id=chr17:26698406..26698419,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.56e-11!23;CL:0000337!1.56e-11!23;CL:0000055!8.36e-10!50;CL:0000221!1.15e-09!44;CL:0000133!1.15e-09!44;CL:0002319!1.77e-09!43;CL:0000393!9.90e-07!39;CL:0000211!9.90e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.51e-12,23;CL:0000337,3.51e-12,23;CL:0000221,1.55e-09,44;CL:0000133,1.55e-09,44;CL:0002319,2.45e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.71e-23!52;UBERON:0005068!1.71e-23!52;UBERON:0006241!1.71e-23!52;UBERON:0007135!1.71e-23!52;UBERON:0001017!6.91e-23!73;UBERON:0005743!6.91e-23!73;UBERON:0000955!2.54e-22!50;UBERON:0006238!2.54e-22!50;UBERON:0000073!2.68e-22!75;UBERON:0001016!2.68e-22!75;UBERON:0002616!7.65e-22!49;UBERON:0002020!7.40e-20!34;UBERON:0003080!2.90e-19!40;UBERON:0002780!5.77e-19!39;UBERON:0001890!5.77e-19!39;UBERON:0006240!5.77e-19!39;UBERON:0000033!4.46e-18!63;UBERON:0002791!2.76e-17!29;UBERON:0003528!2.76e-17!29;UBERON:0001893!2.76e-17!29;UBERON:0004121!1.79e-16!102;UBERON:0000924!1.79e-16!102;UBERON:0006601!1.79e-16!102;UBERON:0002346!2.86e-16!71;UBERON:0003075!2.86e-16!71;UBERON:0007284!2.86e-16!71;UBERON:0003056!7.40e-16!49;UBERON:0000153!1.19e-13!94;UBERON:0007811!4.87e-13!86;UBERON:0000956!1.10e-12!21;UBERON:0001869!1.10e-12!21;UBERON:0000203!1.10e-12!21;UBERON:0002619!1.69e-10!17;UBERON:0000025!2.26e-08!114;UBERON:0004111!7.81e-08!122;UBERON:0002021!3.05e-07!10;UBERON:0000411!3.05e-07!10;UBERON:0001950!3.05e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.00e-26,54;UBERON:0001049,6.37e-25,52;UBERON:0005068,6.37e-25,52;UBERON:0006241,6.37e-25,52;UBERON:0007135,6.37e-25,52;UBERON:0001017,1.40e-23,73;UBERON:0001016,8.42e-23,75;UBERON:0000955,2.79e-22,47;UBERON:0006238,2.79e-22,47;UBERON:0002616,8.84e-22,46;UBERON:0002020,4.76e-21,34;UBERON:0003080,2.04e-20,40;UBERON:0002780,4.25e-20,39;UBERON:0001890,4.25e-20,39;UBERON:0006240,4.25e-20,39;UBERON:0003528,2.62e-18,29;UBERON:0002791,2.62e-18,29;UBERON:0001893,2.62e-18,29;UBERON:0002346,2.84e-18,64;UBERON:0003075,2.84e-18,64;UBERON:0007284,2.84e-18,64;UBERON:0004121,3.39e-17,95;UBERON:0000924,3.39e-17,95;UBERON:0006601,3.39e-17,95;UBERON:0003056,4.17e-16,49;UBERON:0010371,1.74e-15,73;UBERON:0010314,2.05e-15,92;UBERON:0000956,2.09e-13,21;UBERON:0001869,2.09e-13,21;UBERON:0000203,2.09e-13,21;UBERON:0002619,4.44e-11,17;UBERON:0000025,1.73e-08,114;UBERON:0004111,5.23e-08,122;UBERON:0002021,1.30e-07,10;UBERON:0000411,1.30e-07,10;UBERON:0001950,1.30e-07,10 | |||
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| |||
|short_description=p3@Ergic1 | |||
}} |
Latest revision as of 03:05, 26 September 2015
Short description: | p3@Ergic1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ergic1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -14bp_to_ENSMUST00000167662_5end |
EntrezGene: | Ergic1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.51e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.51e-12 | 23 |
ectodermal cell | 1.55e-09 | 44 |
neurectodermal cell | 1.55e-09 | 44 |
neural cell | 2.45e-09 | 43 |