FFCP PHASE1:Hg19::chr5:36606700..36606729,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6507 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10941 | |||
|TSSclassifier=strong | |||
|UniProt=E7EPV5,B4DF14 | |||
|association_with_transcript=0bp_to_ENST00000416645,ENST00000427100,ENST00000504121,ENST00000506725,ENST00000512374_5end | |||
|cluster_id=chr5:36606700..36606729,+ | |||
|coexpression_cluster_id=C2650 | |||
|description=CAGE_peak_1_at_SLC1A3_5end | |||
|id=chr5:36606700..36606729,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.56e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.10e-36!82;UBERON:0005743!4.52e-35!86;UBERON:0000073!2.73e-34!94;UBERON:0001016!2.73e-34!94;UBERON:0001049!4.05e-32!57;UBERON:0005068!4.05e-32!57;UBERON:0006241!4.05e-32!57;UBERON:0007135!4.05e-32!57;UBERON:0002616!2.30e-31!59;UBERON:0000955!4.25e-30!69;UBERON:0006238!4.25e-30!69;UBERON:0004121!1.52e-27!169;UBERON:0000924!1.44e-26!173;UBERON:0006601!1.44e-26!173;UBERON:0003080!1.10e-24!42;UBERON:0007023!1.20e-24!115;UBERON:0002780!3.16e-24!41;UBERON:0001890!3.16e-24!41;UBERON:0006240!3.16e-24!41;UBERON:0003075!5.82e-24!86;UBERON:0007284!5.82e-24!86;UBERON:0000033!1.12e-23!123;UBERON:0000153!7.42e-23!129;UBERON:0007811!7.42e-23!129;UBERON:0002346!1.88e-22!90;UBERON:0001893!5.67e-21!34;UBERON:0002020!6.52e-21!34;UBERON:0003528!6.52e-21!34;UBERON:0002791!2.32e-20!33;UBERON:0000062!3.45e-20!511;UBERON:0001869!7.35e-20!32;UBERON:0000468!2.16e-19!659;UBERON:0000467!3.52e-19!625;UBERON:0000480!3.96e-19!626;UBERON:0000922!2.08e-17!612;UBERON:0003056!3.11e-17!61;UBERON:0002050!1.57e-16!605;UBERON:0005423!1.57e-16!605;UBERON:0000923!1.88e-16!604;UBERON:0005291!1.88e-16!604;UBERON:0006598!1.88e-16!604;UBERON:0002532!1.88e-16!604;UBERON:0000956!1.90e-15!25;UBERON:0000203!1.90e-15!25;UBERON:0002619!7.20e-14!22;UBERON:0001950!1.54e-12!20;UBERON:0003076!1.58e-08!15;UBERON:0003057!1.58e-08!15;UBERON:0000064!1.84e-08!219;UBERON:0000475!7.64e-08!365;UBERON:0000479!1.40e-07!787;UBERON:0004732!2.91e-07!13;UBERON:0002420!3.24e-07!9;UBERON:0007245!3.24e-07!9;UBERON:0010009!3.24e-07!9;UBERON:0010011!3.24e-07!9;UBERON:0000454!3.24e-07!9;UBERON:0002308!6.20e-07!9;UBERON:0000125!6.20e-07!9;UBERON:0004733!7.29e-07!12;UBERON:0002028!7.29e-07!12;UBERON:0007277!7.29e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.30e-18;34!UBERON:0003528;1.96e-18;34!UBERON:0002020;1.96e-18;34!UBERON:0001869;2.35e-18;32!UBERON:0002791;2.55e-18;32!UBERON:0000073;7.32e-18;53!UBERON:0002616;7.32e-18;53!UBERON:0002780;8.12e-18;41!UBERON:0001890;8.12e-18;41!UBERON:0000956;9.26e-16;25!UBERON:0000203;9.26e-16;25!UBERON:0001017;8.95e-15;75!UBERON:0002619;3.78e-14;22!UBERON:0000955;3.93e-14;68!UBERON:0001950;8.59e-13;20!UBERON:0001016;1.58e-12;83!UBERON:0007023;1.89e-07;114!UBERON:0004732;2.21e-07;13!UBERON:0002420;2.49e-07;9!UBERON:0007245;2.49e-07;9!UBERON:0010009;2.49e-07;9!UBERON:0010011;2.49e-07;9!UBERON:0000454;2.49e-07;9!UBERON:0000125;4.83e-07;9!UBERON:0002308;4.83e-07;9!UBERON:0004733;5.66e-07;12!UBERON:0002028;5.66e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.31e-37,81;UBERON:0001016,4.39e-36,89;UBERON:0001049,3.09e-32,56;UBERON:0005068,3.09e-32,56;UBERON:0006241,3.09e-32,56;UBERON:0007135,3.09e-32,56;UBERON:0000073,2.11e-30,53;UBERON:0002616,2.11e-30,53;UBERON:0000955,2.20e-30,68;UBERON:0006238,2.20e-30,68;UBERON:0004121,4.75e-28,171;UBERON:0000924,4.75e-28,171;UBERON:0006601,4.75e-28,171;UBERON:0002780,1.13e-24,41;UBERON:0001890,1.13e-24,41;UBERON:0003080,1.13e-24,41;UBERON:0006240,1.13e-24,41;UBERON:0003075,2.31e-24,82;UBERON:0007284,2.31e-24,82;UBERON:0007023,4.60e-24,114;UBERON:0010371,5.18e-23,104;UBERON:0002346,7.16e-23,86;UBERON:0001893,2.35e-21,34;UBERON:0003528,2.71e-21,34;UBERON:0002020,2.71e-21,34;UBERON:0010314,1.13e-20,132;UBERON:0001869,3.21e-20,32;UBERON:0002791,3.70e-20,32;UBERON:0011216,4.86e-18,223;UBERON:0003056,2.18e-17,61;UBERON:0000956,1.01e-15,25;UBERON:0000203,1.01e-15,25;UBERON:0002050,1.61e-15,564;UBERON:0000923,4.64e-15,560;UBERON:0010316,4.64e-15,560;UBERON:0005291,4.64e-15,560;UBERON:0006598,4.64e-15,560;UBERON:0010317,4.64e-15,560;UBERON:0002532,4.64e-15,560;UBERON:0002619,4.13e-14,22;UBERON:0000922,1.86e-13,592;UBERON:0005423,4.16e-13,581;UBERON:0001950,9.36e-13,20;UBERON:0003076,1.15e-08,15;UBERON:0003057,1.15e-08,15;UBERON:0004732,2.25e-07,13;UBERON:0002420,2.51e-07,9;UBERON:0007245,2.51e-07,9;UBERON:0010009,2.51e-07,9;UBERON:0010011,2.51e-07,9;UBERON:0000454,2.51e-07,9;UBERON:0000125,4.85e-07,9;UBERON:0002308,4.85e-07,9;UBERON:0004733,5.72e-07,12;UBERON:0002028,5.72e-07,12;UBERON:0007277,5.72e-07,12 | |||
|phase1_expression=8.72056220498672,14.9870366723688,3.66481450649525,4.00293193412522,3.12872766099101,0,20.2639902534648,26.5322346839269,19.0665508585882,4.17747692052565,0.697801167972428,6.77168253603534,2.90143676051299,1.8564952944007,1.65698687863958,17.4804538077462,13.8619741445515,9.49403117503585,8.29485757943862,46.6628810111026,13.2600449308764,32.5992910337211,557.87393891843,207.501628410492,273.431869037481,0.61130724598361,0.738905305049512,1.10195093839151,2.36018566109342,1.53531759238885,5.10893206943051,4.59710612239464,6.6265302131215,2.21852406100073,0,0.853015394924529,7.34001098337118,21.6058209327432,25.469144828708,8.68043482863407,779.001934880697,972.328785388977,859.272093627646,2.32637182047304,13.6035339727971,9.94594650870046,16.0376035464922,40.2944530261389,34.6871135402516,7.76769459269806,9.99026755463492,15.6078271726466,41.7142273691308,63.257498991215,40.6279459783025,6.96496656307637,20.7408674043963,20.2251136000576,33.6692281607993,65.4695215235231,53.0649814413204,4.94776950280074,9.57425556583833,10.6556187633174,73.7131466116603,74.8948496592304,102.142848835274,6.28121663141858,9.90817544998383,15.8547856634735,81.7289328555048,185.611928537733,175.32016264225,4.85887158517466,3.61427309940574,6.9187353017764,4.71780250815279,5.85689882081875,6.91120022797445,0.285012743741249,0.39783335439818,1.46131323011707,0,0,0,0.426730222566507,0,0,0,0,0,0,0,1.32171328579026,4.48406850385229,10.271979306228,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,9.75227465255847,6.70700859703636,11.7633556896048,0,0.50133791063589,4.05570253090306,4.7717156823066,2.91980922181582,60.5968178021675,16.6297048096923,11.155017783027,143.880514434237,2.91436230634034,2.96627554227544,17.5255592573529,17.587103467226,28.585961511556,3.10037811596945,0,0.74291500265913,0,0.860234595106124,0,0.56530794192401,0,0,0.417989933073621,0,0,0.33472061276467,0.402829317109147,0,0.488124115096339,0,0,0.625098097988558,0.44905874525234,0.788280363383256,0,0.949265659568129,0.732806975721629,1.31780417436063,0,3.48875241714027,4.47274756525787,0.25326102332916,2.78059279707759,3.15520282823695,1.06400514659507,2.80338800071154,1.06748995729705,0.24666754841716,17.7390290177867,11.7198284700629,11.1154094117152,120.177797550076,60.4984720703999,4.68642863667593,13.4228833037038,7.41613368007784,9.71416423586707,22.7822927368904,25.5759252101648,24.4384403661912,2.44985005505872,5.89604723096486,4.95963749643674,92.6642228680002,47.4752504214829,0.910161361938026,0.718618141816238,7.23845290002485,7.38199267244589,1.93944880838928,5.26773145057006,7.04921930337745,30.4983259580391,8.73427810332162,13.0954434052869,43.5657073189878,15.8948925869671,4.80145753735044,24.5265019587485,16.2313540228746,13.2142967995429,4.05063197379039,1.75386609290158,8.33031455005578,33.9664125990085,0.80823028409406,14.2003837006646,3.62707553619505,0.847802961552438,15.2676073999004,10.3643525824517,16.3478619371732,7.19644866164613,7.95178609928912,5.6935032006064,11.8173602717522,8.83122978064699,9.12443397689575,101.69219601438,35.3782516006087,60.7793653950914,33.4344908183025,29.597058748453,36.4384944122719,39.9545715485101,40.9718750801919,40.036712101859,40.9613354893724,51.487724347108,36.9437784358851,48.8591448162112,48.8628889321916,0,4.20725321410337,0.4115740113314,0,1.26755034821831,7.86261773342101,20.6776467338491,0,51.9011210651939,9.43622956641891,20.7428039422302,2.24803506515239,6.43385423434437,25.5544108637542,1.62904152655162,3.11980435583874,8.6598805215164,145.492658243721,21.9554258220987,0.433099343283221,0.462985512576611,0.190254152234598,0,0,155.362930841148,245.938482661339,139.416030226827,6.56136837907439,31.7486222295845,20.2738389056613,7.25424033893071,8.4283842169049,9.20118429996507,0.492663237895943,0,0.414656231081544,0.720599767084807,0.25248486685276,5.20682733195786,1.52795370223311,1.17217447210047,10.2643467613623,3.29047976650635,0,2.85826432630578,46.0858756659433,60.1624894989927,28.2352400410658,7.36848779819333,0,19.441963308788,0,0,4.62973273671856,1.41849132023278,1.5985330740966,4.86125178437702,8.13932408087165,3.29296134712308,15.961073030393,2.13235169245527,6.33561498346743,0,0,0.599837947092342,161.759628252783,204.920893304308,250.892387984808,0,2.29723871668228,57.0547620162874,28.8114800268483,8.21905290201534,85.2330185021903,10.3118332474045,0.591092280605782,0,0.513372145118994,2477.93077541746,1167.35448910287,216.520867577755,558.834261155387,174.157279201314,0,0,0.414415513436035,3.0672872929785,4.00136416847742,5.42530047399471,0.207970861530807,0.178428988797162,0.315404830067869,0,16.5520354850245,4.5481500811197,8.27784570340039,11.9560607736379,8.29661258437664,19.2012787974463,49.7334939955361,52.1578004192501,2.48121631347465,1.72571360654893,2.24127871387233,8.79069957194152,4.99306318531491,9.67648938654977,11.6610669674825,33.1477862302215,10.6650835884568,1.79394808957981,2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| |||
|short_description=p1@SLC1A3 | |||
}} |
Latest revision as of 19:18, 17 September 2015
Short description: | p1@SLC1A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC1A3_5end |
Coexpression cluster: | C2650_Neural_hippocampus_amygdala_parietal_middle_medial_caudate |
Association with transcript: | 0bp_to_ENST00000416645, ENST00000427100, ENST00000504121, ENST00000506725, ENST00000512374_5end |
EntrezGene: | SLC1A3 |
HGNC: | 10941 |
UniProt: | E7EPV5B4DF14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data