FFCP PHASE1:Mm9::chr18:35278561..35278580,+: Difference between revisions
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{{FFCP|EntrezGene=12385|HGNC=|MCL_coexpression_id=3134|UniProt=P26231,Q545R0|association_with_transcript=0bp_to_NM_009818,uc008ely.1_5end|description=CAGE_peak_1_at_Ctnna1_5end|id=chr18:35278561..35278580,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!2.12e-10!23;UBERON:0001009!2.12e-10!23;UBERON:0005409!2.63e-09!59;UBERON:0007100!3.43e-09!18;UBERON:0000948!3.43e-09!18;UBERON:0005498!3.43e-09!18;UBERON:0004140!3.43e-09!18;UBERON:0009881!3.43e-09!18;UBERON:0004141!3.43e-09!18;UBERON:0003084!3.43e-09!18;UBERON:0007005!3.43e-09!18;UBERON:0004139!3.43e-09!18;UBERON:0004291!3.43e-09!18;UBERON:0000160!1.08e-08!43;UBERON:0005178!3.12e-08!17;UBERON:0005181!3.12e-08!17;UBERON:0002224!3.12e-08!17;UBERON:0000915!3.12e-08!17;UBERON:0008947!3.12e-08!17;UBERON:0003258!3.12e-08!17;UBERON:0003103!6.07e-08!43;UBERON:0004872!9.34e-08!33;UBERON:0000344!4.95e-07!15;UBERON:0002048!7.31e-07!14;UBERON:0000117!7.31e-07!14;UBERON:0000171!7.31e-07!14;UBERON:0000170!7.31e-07!14;UBERON:0005597!7.31e-07!14;UBERON:0000118!7.31e-07!14;UBERON:0004119!8.88e-07!130;UBERON:0000925!8.88e-07!130;UBERON:0006595!8.88e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.12e-12,31;UBERON:0005409,9.22e-12,47;UBERON:0004535,2.12e-10,23;UBERON:0001009,2.12e-10,23;UBERON:0007100,3.43e-09,18;UBERON:0000948,3.43e-09,18;UBERON:0005498,3.43e-09,18;UBERON:0004140,3.43e-09,18;UBERON:0009881,3.43e-09,18;UBERON:0004141,3.43e-09,18;UBERON:0003084,3.43e-09,18;UBERON:0007005,3.43e-09,18;UBERON:0004139,3.43e-09,18;UBERON:0004291,3.43e-09,18;UBERON:0005178,3.12e-08,17;UBERON:0005181,3.12e-08,17;UBERON:0002224,3.12e-08,17;UBERON:0000915,3.12e-08,17;UBERON:0008947,3.12e-08,17;UBERON:0003258,3.12e-08,17;UBERON:0003103,6.07e-08,43;UBERON:0004872,9.34e-08,33;UBERON:0004119,1.63e-07,118;UBERON:0000925,1.63e-07,118;UBERON:0006595,1.63e-07,118;UBERON:0000344,4.95e-07,15;UBERON:0001007,6.55e-07,116;UBERON:0001555,6.55e-07,116;UBERON:0007026,6.55e-07,116;UBERON:0002048,7.31e-07,14;UBERON:0000117,7.31e-07,14;UBERON:0000171,7.31e-07,14;UBERON:0000170,7.31e-07,14;UBERON:0005597,7.31e-07,14;UBERON:0000118,7.31e-07,14|phase1_expression=33.6312578920067,191.23852338637,161.979729222675,196.299273138133,163.292007962509,90.3190482885967,107.228202033346,2.7115897922731,7.32101355188667,3.97909694747389,3.76679530096111,0.638177271962691,2.56801094896809,0.786783621770977,8.32774404539157,10.7311891716608,9.09430441566591,5.99378114180652,5.48457734422955,6.36584477697045,52.8118831838143,9.33334941288322,12.27639008953,177.111612032301,152.786581190735,127.479496033534,133.536218809313,160.741539583673,225.937845733629,156.510710580917,113.526021455516,10.7955214488137,6.1506478758457,0,52.8598464144833,47.8755778632458,46.9589519403449,9.20769587621197,10.1573594788094,17.2762835511353,14.7057872007754,9.56263678941824,12.62326917881,73.3978448797615,70.5583441287821,82.5960384727567,17.9950009200049,22.456591107186,33.6119859583742,48.9963345667194,35.136591827966,24.4379359420452,7.55021727259814,1.45072428402269,3.02484419228218,82.0657600954671,48.7106847895886,90.2426161485524,12.7459370341547,6.34789175126439,10.1413024560989,28.124096161738,21.3430751066673,2.6996991518442,5.93319817540185,5.6838409195688,10.4860038681442,14.9845139075406,21.048991298621,19.5758610580951,19.3498964443271,7.7125765789027,9.27647871996777,21.0684174649721,19.5524760877202,11.9498442259303,11.0115880999389,11.8749224419225,10.4452442614246,10.0233578674947,11.3444678066988,11.4600941522487,11.1673199600552,7.31591393041184,14.9742282821274,12.6690291753677,15.9456282494995,8.57437450796383,112.301944713112,138.295954995418,177.107202596725,58.5088236347343,52.3577926954968,28.0645659651665,45.4843492213368,60.035602871043,44.5208811817653,76.5232148375479,50.9180569021623,52.6475966020407,59.8584534050892,32.0816193535795,7.64415719119937,7.11066703153331,141.585140821334,129.72025112325,124.359013473637,65.3131791993023,46.6088190564909,63.6816776588098,38.5137425420822,52.6725277480004,47.9680234292602,61.3441147049174,57.6184664964954,46.1196390179909,167.350993156171,75.0470662414342,22.9998743506967,38.9858108373256,22.7466764014205,25.2135131630315,137.92990330141,11.7112318804619,12.5668024088073,148.931463186609,17.0137476798407,5.99902730993408,15.2484272487678,13.1815762676244,11.4375150704657,5.27748278874031,11.4724051326902,8.18289463457058,12.259494629014,13.7905073607594,51.6325574721104,34.5851378296059,41.4465323831227,66.4996264601258,51.5276954132307,39.0833577536904,42.3146005042571,42.8001682653431,32.9296655892427,44.9679158199823,36.2625674046151,55.3625213381493,67.2572137950468,58.8119909321918,54.0169951183323,41.6471891612392,51.4387411067356,59.2028683087683,52.8860090568415,64.2880681823733,4.21327912387941,4.11756651383544,9.37739548005456,92.3780945508338,84.4293815931946,90.5712169148905,100.143023152544,113.336197486505,116.471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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12385 | |||
|HGNC= | |||
|MCL_coexpression_id=3134 | |||
|TSSclassifier=NA | |||
|UniProt=P26231,Q545R0 | |||
|association_with_transcript=0bp_to_NM_009818,uc008ely.1_5end | |||
|cluster_id=chr18:35278561..35278580,+ | |||
|description=CAGE_peak_1_at_Ctnna1_5end | |||
|id=chr18:35278561..35278580,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!2.12e-10!23;UBERON:0001009!2.12e-10!23;UBERON:0005409!2.63e-09!59;UBERON:0007100!3.43e-09!18;UBERON:0000948!3.43e-09!18;UBERON:0005498!3.43e-09!18;UBERON:0004140!3.43e-09!18;UBERON:0009881!3.43e-09!18;UBERON:0004141!3.43e-09!18;UBERON:0003084!3.43e-09!18;UBERON:0007005!3.43e-09!18;UBERON:0004139!3.43e-09!18;UBERON:0004291!3.43e-09!18;UBERON:0000160!1.08e-08!43;UBERON:0005178!3.12e-08!17;UBERON:0005181!3.12e-08!17;UBERON:0002224!3.12e-08!17;UBERON:0000915!3.12e-08!17;UBERON:0008947!3.12e-08!17;UBERON:0003258!3.12e-08!17;UBERON:0003103!6.07e-08!43;UBERON:0004872!9.34e-08!33;UBERON:0000344!4.95e-07!15;UBERON:0002048!7.31e-07!14;UBERON:0000117!7.31e-07!14;UBERON:0000171!7.31e-07!14;UBERON:0000170!7.31e-07!14;UBERON:0005597!7.31e-07!14;UBERON:0000118!7.31e-07!14;UBERON:0004119!8.88e-07!130;UBERON:0000925!8.88e-07!130;UBERON:0006595!8.88e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.12e-12,31;UBERON:0005409,9.22e-12,47;UBERON:0004535,2.12e-10,23;UBERON:0001009,2.12e-10,23;UBERON:0007100,3.43e-09,18;UBERON:0000948,3.43e-09,18;UBERON:0005498,3.43e-09,18;UBERON:0004140,3.43e-09,18;UBERON:0009881,3.43e-09,18;UBERON:0004141,3.43e-09,18;UBERON:0003084,3.43e-09,18;UBERON:0007005,3.43e-09,18;UBERON:0004139,3.43e-09,18;UBERON:0004291,3.43e-09,18;UBERON:0005178,3.12e-08,17;UBERON:0005181,3.12e-08,17;UBERON:0002224,3.12e-08,17;UBERON:0000915,3.12e-08,17;UBERON:0008947,3.12e-08,17;UBERON:0003258,3.12e-08,17;UBERON:0003103,6.07e-08,43;UBERON:0004872,9.34e-08,33;UBERON:0004119,1.63e-07,118;UBERON:0000925,1.63e-07,118;UBERON:0006595,1.63e-07,118;UBERON:0000344,4.95e-07,15;UBERON:0001007,6.55e-07,116;UBERON:0001555,6.55e-07,116;UBERON:0007026,6.55e-07,116;UBERON:0002048,7.31e-07,14;UBERON:0000117,7.31e-07,14;UBERON:0000171,7.31e-07,14;UBERON:0000170,7.31e-07,14;UBERON:0005597,7.31e-07,14;UBERON:0000118,7.31e-07,14 | |||
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| |||
|short_description=p1@Ctnna1 | |||
}} |
Latest revision as of 04:37, 27 September 2015
Short description: | p1@Ctnna1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ctnna1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3134 |
Association with transcript: | 0bp_to_NM_009818, uc008ely.1_5end |
EntrezGene: | Ctnna1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 4.12e-12 | 31 |
gastrointestinal system | 9.22e-12 | 47 |
cardiovascular system | 2.12e-10 | 23 |
circulatory system | 2.12e-10 | 23 |
primary circulatory organ | 3.43e-09 | 18 |
heart | 3.43e-09 | 18 |
primitive heart tube | 3.43e-09 | 18 |
primary heart field | 3.43e-09 | 18 |
anterior lateral plate mesoderm | 3.43e-09 | 18 |
heart tube | 3.43e-09 | 18 |
heart primordium | 3.43e-09 | 18 |
cardiac mesoderm | 3.43e-09 | 18 |
cardiogenic plate | 3.43e-09 | 18 |
heart rudiment | 3.43e-09 | 18 |
thoracic cavity element | 3.12e-08 | 17 |
thoracic segment organ | 3.12e-08 | 17 |
thoracic cavity | 3.12e-08 | 17 |
thoracic segment of trunk | 3.12e-08 | 17 |
respiratory primordium | 3.12e-08 | 17 |
endoderm of foregut | 3.12e-08 | 17 |
compound organ | 6.07e-08 | 43 |
splanchnic layer of lateral plate mesoderm | 9.34e-08 | 33 |
endoderm-derived structure | 1.63e-07 | 118 |
endoderm | 1.63e-07 | 118 |
presumptive endoderm | 1.63e-07 | 118 |
mucosa | 4.95e-07 | 15 |
digestive system | 6.55e-07 | 116 |
digestive tract | 6.55e-07 | 116 |
primitive gut | 6.55e-07 | 116 |
lung | 7.31e-07 | 14 |
respiratory tube | 7.31e-07 | 14 |
respiration organ | 7.31e-07 | 14 |
pair of lungs | 7.31e-07 | 14 |
lung primordium | 7.31e-07 | 14 |
lung bud | 7.31e-07 | 14 |