FFCP PHASE1:Hg19::chr5:76383133..76383186,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84327 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20711 | |||
|TSSclassifier=strong | |||
|UniProt=Q96IU2 | |||
|association_with_transcript=0bp_to_ENST00000255198_5end | |||
|cluster_id=chr5:76383133..76383186,- | |||
|description=CAGE_peak_2_at_ZBED3_5end | |||
|id=chr5:76383133..76383186,- | |||
|ontology_enrichment_celltype=CL:1000497!4.64e-08!18;CL:0002518!4.64e-08!18;CL:1000449!1.69e-07!16;CL:1000507!7.12e-07!12;CL:1000494!7.12e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.33e-07;10!CL:1000494;1.33e-07;10!CL:1000497;2.03e-07;17!CL:0002518;2.03e-07;17!CL:1000449;5.07e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,7.06e-08,17;CL:0002518,7.06e-08,17;CL:1000507,1.42e-07,10;CL:1000494,1.42e-07,10;CL:1000449,3.15e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0003104;4.46e-07;31 | |||
|ontology_enrichment_disease=DOID:0050687!6.21e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!6.45e-13!32;UBERON:0005172!1.49e-12!55;UBERON:0005173!1.49e-12!55;UBERON:0002113!1.56e-12!27;UBERON:0003918!1.56e-12!27;UBERON:0005095!1.56e-12!27;UBERON:0007687!1.56e-12!27;UBERON:0002417!5.33e-12!61;UBERON:0000916!5.33e-12!61;UBERON:0006554!1.89e-11!44;UBERON:0001008!2.06e-11!45;UBERON:0000922!3.70e-09!612;UBERON:0005177!9.25e-09!107;UBERON:0000080!1.52e-08!18;UBERON:0002120!1.52e-08!18;UBERON:0004875!1.52e-08!18;UBERON:0005721!1.52e-08!18;UBERON:0005754!1.52e-08!18;UBERON:0007297!1.52e-08!18;UBERON:0002050!3.25e-08!605;UBERON:0005423!3.25e-08!605;UBERON:0000481!3.30e-08!347;UBERON:0000923!4.22e-08!604;UBERON:0005291!4.22e-08!604;UBERON:0006598!4.22e-08!604;UBERON:0002532!4.22e-08!604;UBERON:0006555!5.29e-08!17;UBERON:0005103!5.29e-08!17;UBERON:0000083!5.29e-08!17;UBERON:0009201!5.29e-08!17;UBERON:0004819!5.29e-08!17;UBERON:0006553!5.29e-08!17;UBERON:0003074!5.29e-08!17;UBERON:0003060!5.29e-08!17;UBERON:0004211!1.69e-07!16;UBERON:0001285!1.69e-07!16;UBERON:0007684!1.69e-07!16;UBERON:0003220!1.69e-07!16;UBERON:0004208!1.69e-07!16;UBERON:0000073!3.75e-07!94;UBERON:0001016!3.75e-07!94;UBERON:0003887!5.03e-07!21;UBERON:0000468!5.61e-07!659;UBERON:0009773!7.12e-07!12;UBERON:0001231!7.12e-07!12;UBERON:0004810!7.12e-07!12;UBERON:0004876!7.41e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000489;2.01e-11;29!UBERON:0002113;3.55e-11;24!UBERON:0011143;3.55e-11;24!UBERON:0006554;4.37e-09;30!UBERON:0001008;4.37e-09;30!UBERON:0004211;1.33e-07;10!UBERON:0009773;1.33e-07;10!UBERON:0001231;1.33e-07;10!UBERON:0004810;1.33e-07;10!UBERON:0005172;1.39e-07;52!UBERON:0005173;1.39e-07;52!UBERON:0006555;5.07e-07;15!UBERON:0004819;5.07e-07;15!UBERON:0001285;5.07e-07;15!UBERON:0007684;5.07e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,4.82e-13,31;UBERON:0002113,6.09e-13,26;UBERON:0003918,6.09e-13,26;UBERON:0011143,6.09e-13,26;UBERON:0005095,6.09e-13,26;UBERON:0007687,6.09e-13,26;UBERON:0005172,3.32e-12,54;UBERON:0005173,3.32e-12,54;UBERON:0002417,2.55e-11,60;UBERON:0000916,2.55e-11,60;UBERON:0006554,4.99e-10,47;UBERON:0001008,5.01e-10,48;UBERON:0011216,1.85e-09,223;UBERON:0006555,8.52e-08,16;UBERON:0004819,8.52e-08,16;UBERON:0005177,1.38e-07,101;UBERON:0004810,1.42e-07,10;UBERON:0004211,3.15e-07,15;UBERON:0009773,3.15e-07,15;UBERON:0001231,3.15e-07,15;UBERON:0001285,3.15e-07,15;UBERON:0007684,3.15e-07,15;UBERON:0004208,3.15e-07,15;UBERON:0003104,8.52e-07,160;UBERON:0009142,8.52e-07,160 | |||
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| |||
|short_description=p2@ZBED3 | |||
}} |
Latest revision as of 19:13, 18 September 2015
Short description: | p2@ZBED3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZBED3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000255198_5end |
EntrezGene: | ZBED3 |
HGNC: | 20711 |
UniProt: | Q96IU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 7.06e-08 | 17 |
kidney epithelial cell | 7.06e-08 | 17 |
kidney tubule cell | 1.42e-07 | 10 |
nephron tubule epithelial cell | 1.42e-07 | 10 |
epithelial cell of nephron | 3.15e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 4.82e-13 | 31 |
kidney | 6.09e-13 | 26 |
kidney mesenchyme | 6.09e-13 | 26 |
upper urinary tract | 6.09e-13 | 26 |
kidney rudiment | 6.09e-13 | 26 |
kidney field | 6.09e-13 | 26 |
abdomen element | 3.32e-12 | 54 |
abdominal segment element | 3.32e-12 | 54 |
abdominal segment of trunk | 2.55e-11 | 60 |
abdomen | 2.55e-11 | 60 |
urinary system structure | 4.99e-10 | 47 |
renal system | 5.01e-10 | 48 |
organ system subdivision | 1.85e-09 | 223 |
excretory tube | 8.52e-08 | 16 |
kidney epithelium | 8.52e-08 | 16 |
trunk region element | 1.38e-07 | 101 |
nephron tubule epithelium | 1.42e-07 | 10 |
nephron epithelium | 3.15e-07 | 15 |
renal tubule | 3.15e-07 | 15 |
nephron tubule | 3.15e-07 | 15 |
nephron | 3.15e-07 | 15 |
uriniferous tubule | 3.15e-07 | 15 |
nephrogenic mesenchyme | 3.15e-07 | 15 |
mesenchyme | 8.52e-07 | 160 |
entire embryonic mesenchyme | 8.52e-07 | 160 |