FFCP PHASE1:Hg19::chrX:40482675..40482695,+: Difference between revisions
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|id=chrX:40482675..40482695,+
|short_description=p1@LOC347411
|description=CAGE_peak_1_at_LOC347411_5end
|association_with_transcript=-122bp_to_NM_001195522_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=347411 | |EntrezGene=347411 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-122bp_to_NM_001195522_5end | |||
|cluster_id=chrX:40482675..40482695,+ | |||
|coexpression_cluster_id=C157 | |||
|description=CAGE_peak_1_at_LOC347411_5end | |||
|id=chrX:40482675..40482695,+ | |||
|ontology_enrichment_celltype=CL:0000039!8.05e-37!7;CL:0000586!8.05e-37!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.89e-08;7!CL:0000586;1.89e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.89e-08,7;CL:0000586,1.89e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.18e-45;10!UBERON:0005564;4.18e-45;10 | |||
|ontology_enrichment_disease=DOID:3095!2.74e-12!22;DOID:2994!2.74e-12!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!6.68e-88!8;UBERON:0003135!3.89e-64!11;UBERON:0000991!6.62e-34!21;UBERON:0009196!6.62e-34!21;UBERON:0009117!6.62e-34!21;UBERON:0005564!6.62e-34!21;UBERON:0004176!2.17e-32!22;UBERON:0003101!2.17e-32!22;UBERON:0000079!2.17e-32!22;UBERON:0002323!9.62e-16!46;UBERON:0003133!4.19e-15!48;UBERON:0004458!8.37e-15!49;UBERON:0005156!2.34e-12!59;UBERON:0000990!2.34e-12!59;UBERON:0003886!1.35e-11!63;UBERON:0002553!1.82e-10!70;UBERON:0000464!3.96e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.57e-56;8!UBERON:0003135;4.07e-41;11!UBERON:0000991;4.43e-22;21!UBERON:0003101;3.99e-21;22!UBERON:0000079;3.99e-21;22!UBERON:0002323;7.84e-08;45!UBERON:0003133;5.07e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.57e-56,8;UBERON:0003135,4.07e-41,11;UBERON:0000991,4.43e-22,21;UBERON:0009196,4.43e-22,21;UBERON:0009117,4.43e-22,21;UBERON:0005564,4.43e-22,21;UBERON:0004176,3.99e-21,22;UBERON:0003101,3.99e-21,22;UBERON:0000079,3.99e-21,22;UBERON:0002323,1.31e-10,46;UBERON:0003133,3.32e-10,48;UBERON:0004458,5.14e-10,49;UBERON:0003886,3.61e-09,54;UBERON:0005156,1.83e-08,59;UBERON:0000990,1.83e-08,59;UBERON:0002553,3.25e-08,61 | |||
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|short_description=p1@LOC347411 | |||
}} | }} |
Latest revision as of 01:29, 25 September 2015
Short description: | p1@LOC347411 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC347411_5end |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | -122bp_to_NM_001195522_5end |
EntrezGene: | LOC347411 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.89e-08 | 7 |
germ cell | 1.89e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 4.57e-56 | 8 |
male reproductive organ | 4.07e-41 | 11 |
gonad | 4.43e-22 | 21 |
indifferent external genitalia | 4.43e-22 | 21 |
indifferent gonad | 4.43e-22 | 21 |
gonad primordium | 4.43e-22 | 21 |
external genitalia | 3.99e-21 | 22 |
male organism | 3.99e-21 | 22 |
male reproductive system | 3.99e-21 | 22 |
body cavity | 1.31e-10 | 46 |
reproductive organ | 3.32e-10 | 48 |
body cavity or lining | 5.14e-10 | 49 |
body cavity precursor | 3.61e-09 | 54 |
reproductive structure | 1.83e-08 | 59 |
reproductive system | 1.83e-08 | 59 |
anatomical cavity | 3.25e-08 | 61 |