FFCP PHASE1:Hg19::chrX:48325824..48325835,-: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:48325824..48325835,-
|short_description=p13@SLC38A5
|description=CAGE_peak_13_at_SLC38A5_5end
|association_with_transcript=44bp_to_ENST00000376875,uc004djk...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=92745 | |EntrezGene=92745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18070 | |HGNC=18070 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WUX1 | |UniProt=Q8WUX1 | ||
|association_with_transcript=44bp_to_ENST00000376875,uc004djk.3_5end | |||
|cluster_id=chrX:48325824..48325835,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_13_at_SLC38A5_5end | |||
|id=chrX:48325824..48325835,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.97e-25;2!CL:0000558;1.97e-25;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.85e-25,2;CL:0000765,1.85e-25,2;CL:0000050,1.85e-25,2;CL:0000038,1.85e-25,2;CL:0000558,1.85e-25,2;CL:0000547,1.85e-25,2;CL:0000549,1.85e-25,2;CL:0000550,1.85e-25,2;CL:0000552,1.85e-25,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;1.61e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,1.25e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!7.94e-13!15;UBERON:0000179!7.94e-13!15;UBERON:0000463!7.94e-13!15;UBERON:0007023!8.82e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.45e-67;15!UBERON:0000179;8.45e-67;15!UBERON:0000463;8.45e-67;15!UBERON:0002390;2.81e-28;32!UBERON:0002193;9.61e-16;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.46e-67,15;UBERON:0000179,8.46e-67,15;UBERON:0000463,8.46e-67,15;UBERON:0007023,5.92e-17,114;UBERON:0002390,2.59e-09,98;UBERON:0003061,2.59e-09,98;UBERON:0004535,2.33e-08,109;UBERON:0002193,2.33e-08,108;UBERON:0001009,4.17e-08,112 | |||
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| ||
|short_description=p13@SLC38A5 | |||
}} | }} |
Latest revision as of 17:55, 15 September 2015
Short description: | p13@SLC38A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SLC38A5_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 44bp_to_ENST00000376875, uc004djk.3_5end |
EntrezGene: | SLC38A5 |
HGNC: | 18070 |
UniProt: | Q8WUX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.85e-25 | 2 |
erythroblast | 1.85e-25 | 2 |
megakaryocyte-erythroid progenitor cell | 1.85e-25 | 2 |
erythroid progenitor cell | 1.85e-25 | 2 |
reticulocyte | 1.85e-25 | 2 |
proerythroblast | 1.85e-25 | 2 |
basophilic erythroblast | 1.85e-25 | 2 |
polychromatophilic erythroblast | 1.85e-25 | 2 |
orthochromatic erythroblast | 1.85e-25 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 8.46e-67 | 15 |
haemolymphatic fluid | 8.46e-67 | 15 |
organism substance | 8.46e-67 | 15 |
adult organism | 5.92e-17 | 114 |
hematopoietic system | 2.59e-09 | 98 |
blood island | 2.59e-09 | 98 |
cardiovascular system | 2.33e-08 | 109 |
hemolymphoid system | 2.33e-08 | 108 |
circulatory system | 4.17e-08 | 112 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 1.25e-13 | 1 |