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FFCP PHASE1:Mm9::chr19:46392613..46392637,-: Difference between revisions

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{{FFCP|EntrezGene=73728|HGNC=|MCL_coexpression_id=2|UniProt=Q5DTT2|association_with_transcript=-234bp_to_uc008htb.1_5end|description=CAGE_peak_3_at_Psd_5end|id=chr19:46392613..46392637,-|ontology_enrichment_celltype=CL:0000117!2.08e-07!23;CL:0000337!2.08e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.87e-09,23;CL:0000337,3.87e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.92e-11!34;UBERON:0001017!8.42e-10!73;UBERON:0005743!8.42e-10!73;UBERON:0001049!1.78e-09!52;UBERON:0005068!1.78e-09!52;UBERON:0006241!1.78e-09!52;UBERON:0007135!1.78e-09!52;UBERON:0000073!2.73e-09!75;UBERON:0001016!2.73e-09!75;UBERON:0000955!8.63e-09!50;UBERON:0006238!8.63e-09!50;UBERON:0002791!9.41e-09!29;UBERON:0003528!9.41e-09!29;UBERON:0001893!9.41e-09!29;UBERON:0002616!1.96e-08!49;UBERON:0002021!2.71e-08!10;UBERON:0000411!2.71e-08!10;UBERON:0001950!2.71e-08!10;UBERON:0003080!2.83e-08!40;UBERON:0002780!4.21e-08!39;UBERON:0001890!4.21e-08!39;UBERON:0006240!4.21e-08!39;UBERON:0002346!6.81e-07!71;UBERON:0003075!6.81e-07!71;UBERON:0007284!6.81e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.78e-15,34;UBERON:0000073,3.03e-14,54;UBERON:0001049,6.65e-12,52;UBERON:0005068,6.65e-12,52;UBERON:0006241,6.65e-12,52;UBERON:0007135,6.65e-12,52;UBERON:0002021,1.73e-11,10;UBERON:0000411,1.73e-11,10;UBERON:0001950,1.73e-11,10;UBERON:0003528,2.87e-11,29;UBERON:0002791,2.87e-11,29;UBERON:0001893,2.87e-11,29;UBERON:0001017,6.20e-11,73;UBERON:0003080,7.05e-11,40;UBERON:0002780,1.26e-10,39;UBERON:0001890,1.26e-10,39;UBERON:0006240,1.26e-10,39;UBERON:0001016,2.73e-10,75;UBERON:0000955,1.40e-09,47;UBERON:0006238,1.40e-09,47;UBERON:0002616,4.26e-09,46;UBERON:0002619,6.57e-09,17;UBERON:0002346,9.29e-09,64;UBERON:0003075,9.29e-09,64;UBERON:0007284,9.29e-09,64;UBERON:0003056,1.81e-08,49;UBERON:0000956,1.40e-07,21;UBERON:0001869,1.40e-07,21;UBERON:0000203,1.40e-07,21;UBERON:0004121,2.48e-07,95;UBERON:0000924,2.48e-07,95;UBERON:0006601,2.48e-07,95;UBERON:0010371,6.69e-07,73|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,2.89562681343828,2.53442328048786,0.917733760808408,0,0,0,0,0.419959264876088,0,0,0,0,0.257259436035947,0,0.515672092277442,2.83243045203437,2.11596391708813,1.90149421051854,1.35537812827653,0,0,0,0,0.599200221036809,0.384218305321555,0.207379224616955,0.675029691658453,0.630974884054146,5.71301968807607,2.87129103237098,1.10241719293459,0.383381884072945,0,3.30347642998166,3.31987079021488,2.30409799884365,2.63772575460388,4.57438218012048,3.12548022334056,2.23346399201105,3.93933827022176,1.37518422999129,3.24091444021034,5.26775218956681,4.47358669980721,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,1.36344258062446,2.59786004602869,2.12003744706204,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,1.04091196059682,0.304465478312141,0.461230994512117,0.753613202763113,0.470354828542819,0.251333182659351,1.48316980640624,0,0,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0.41889341362691,0.510914110417183,0,0,0.127070227073065,1.04853447583376,0.915001205637253,3.01570445070875,4.17178368461463,5.62574006126727,1.24672826735736,2.75810147215188,4.07357455401265,0.497627882440372,0,0,0,0.229902104433473,0,1.20563854268572,0.408218994907967,0.2562274405697,0.374806898238915,1.03481348295606,0,0,0.175951124163949,0.219195732427575,1.11218899690239,0,0.411564272815887,0.59710280045548,0,0,0,0.828503090142008,0.938104239924385,0.540186184383045,1.18372367792605,0.590292695242212,0.462801338662135,0.697601834251224,0.536546802799238,0.583826711835847,0.329119699826961,0.492502392237286,0.405344047729279,0.584799949701329,0,0.402619256281115,7.36014819974445,2.98423375899925,0,0.264450566663544,4.47905326123991,3.71578674976702,2.19074684247559,1.61346819698674,2.44615848229357,1.71203063501303,0.949058123089023,1.64698954724011,1.75934646160189,3.58121649674071,2.14460495831032,0.898819408654221,0.432276099749388,0.796565093017469,0,0.456994050438915,0,0.203651327845314,0.969762435838129,0.631222379012867,0.822074982615345,0,0,0,0,0.333690211432188,0.393117990226406,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0.184753190166605,1.13694847062291,0.488894929326078,0.848725428875941,0.938760993154008,0.167506257441816,0.238043640886014,0.390267295715598,0.630540576424764,0.44292937929755,0.797273843287435,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0.963303539926752,1.87538698547525,0,0.504941854408746,0.315508219416257,0.780877488593277,0.215423397732799,0,0,0.283076530788832,0.809621403349789,0.876767573733936,1.18586333383957,2.24924921495265,1.56134093729095,4.80777129901589,6.02681749608232,9.89820737835213,0,2.42780636154981,1.51161778482376,0.94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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=73728
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q5DTT2
|association_with_transcript=-234bp_to_uc008htb.1_5end
|cluster_id=chr19:46392613..46392637,-
|description=CAGE_peak_3_at_Psd_5end
|id=chr19:46392613..46392637,-
|ontology_enrichment_celltype=CL:0000117!2.08e-07!23;CL:0000337!2.08e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.87e-09,23;CL:0000337,3.87e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!1.92e-11!34;UBERON:0001017!8.42e-10!73;UBERON:0005743!8.42e-10!73;UBERON:0001049!1.78e-09!52;UBERON:0005068!1.78e-09!52;UBERON:0006241!1.78e-09!52;UBERON:0007135!1.78e-09!52;UBERON:0000073!2.73e-09!75;UBERON:0001016!2.73e-09!75;UBERON:0000955!8.63e-09!50;UBERON:0006238!8.63e-09!50;UBERON:0002791!9.41e-09!29;UBERON:0003528!9.41e-09!29;UBERON:0001893!9.41e-09!29;UBERON:0002616!1.96e-08!49;UBERON:0002021!2.71e-08!10;UBERON:0000411!2.71e-08!10;UBERON:0001950!2.71e-08!10;UBERON:0003080!2.83e-08!40;UBERON:0002780!4.21e-08!39;UBERON:0001890!4.21e-08!39;UBERON:0006240!4.21e-08!39;UBERON:0002346!6.81e-07!71;UBERON:0003075!6.81e-07!71;UBERON:0007284!6.81e-07!71
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.78e-15,34;UBERON:0000073,3.03e-14,54;UBERON:0001049,6.65e-12,52;UBERON:0005068,6.65e-12,52;UBERON:0006241,6.65e-12,52;UBERON:0007135,6.65e-12,52;UBERON:0002021,1.73e-11,10;UBERON:0000411,1.73e-11,10;UBERON:0001950,1.73e-11,10;UBERON:0003528,2.87e-11,29;UBERON:0002791,2.87e-11,29;UBERON:0001893,2.87e-11,29;UBERON:0001017,6.20e-11,73;UBERON:0003080,7.05e-11,40;UBERON:0002780,1.26e-10,39;UBERON:0001890,1.26e-10,39;UBERON:0006240,1.26e-10,39;UBERON:0001016,2.73e-10,75;UBERON:0000955,1.40e-09,47;UBERON:0006238,1.40e-09,47;UBERON:0002616,4.26e-09,46;UBERON:0002619,6.57e-09,17;UBERON:0002346,9.29e-09,64;UBERON:0003075,9.29e-09,64;UBERON:0007284,9.29e-09,64;UBERON:0003056,1.81e-08,49;UBERON:0000956,1.40e-07,21;UBERON:0001869,1.40e-07,21;UBERON:0000203,1.40e-07,21;UBERON:0004121,2.48e-07,95;UBERON:0000924,2.48e-07,95;UBERON:0006601,2.48e-07,95;UBERON:0010371,6.69e-07,73
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,2.89562681343828,2.53442328048786,0.917733760808408,0,0,0,0,0.419959264876088,0,0,0,0,0.257259436035947,0,0.515672092277442,2.83243045203437,2.11596391708813,1.90149421051854,1.35537812827653,0,0,0,0,0.599200221036809,0.384218305321555,0.207379224616955,0.675029691658453,0.630974884054146,5.71301968807607,2.87129103237098,1.10241719293459,0.383381884072945,0,3.30347642998166,3.31987079021488,2.30409799884365,2.63772575460388,4.57438218012048,3.12548022334056,2.23346399201105,3.93933827022176,1.37518422999129,3.24091444021034,5.26775218956681,4.47358669980721,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,1.36344258062446,2.59786004602869,2.12003744706204,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,1.04091196059682,0.304465478312141,0.461230994512117,0.753613202763113,0.470354828542819,0.251333182659351,1.48316980640624,0,0,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0.41889341362691,0.510914110417183,0,0,0.127070227073065,1.04853447583376,0.915001205637253,3.01570445070875,4.17178368461463,5.62574006126727,1.24672826735736,2.75810147215188,4.07357455401265,0.497627882440372,0,0,0,0.229902104433473,0,1.20563854268572,0.408218994907967,0.2562274405697,0.374806898238915,1.03481348295606,0,0,0.175951124163949,0.219195732427575,1.11218899690239,0,0.411564272815887,0.59710280045548,0,0,0,0.828503090142008,0.938104239924385,0.540186184383045,1.18372367792605,0.590292695242212,0.462801338662135,0.697601834251224,0.536546802799238,0.583826711835847,0.329119699826961,0.492502392237286,0.405344047729279,0.584799949701329,0,0.402619256281115,7.36014819974445,2.98423375899925,0,0.264450566663544,4.47905326123991,3.71578674976702,2.19074684247559,1.61346819698674,2.44615848229357,1.71203063501303,0.949058123089023,1.64698954724011,1.75934646160189,3.58121649674071,2.14460495831032,0.898819408654221,0.432276099749388,0.796565093017469,0,0.456994050438915,0,0.203651327845314,0.969762435838129,0.631222379012867,0.822074982615345,0,0,0,0,0.333690211432188,0.393117990226406,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0.184753190166605,1.13694847062291,0.488894929326078,0.848725428875941,0.938760993154008,0.167506257441816,0.238043640886014,0.390267295715598,0.630540576424764,0.44292937929755,0.797273843287435,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0.963303539926752,1.87538698547525,0,0.504941854408746,0.315508219416257,0.780877488593277,0.215423397732799,0,0,0.283076530788832,0.809621403349789,0.876767573733936,1.18586333383957,2.24924921495265,1.56134093729095,4.80777129901589,6.02681749608232,9.89820737835213,0,2.42780636154981,1.51161778482376,0.943025398779491,1.47650946440386,1.53717573971964,2.58428293168221,1.09060118843252,0.356497378384721,0.948110273807448,0,1.03135543248187,0.340439605753788,0.18006109403131,0.129358683782755,0,0.177340233642274,1.96205699362278,1.15184314421485,1.8267896946876,0.23467170806371,0,0,0,0.645857706783622,0.603129249281559,0.954978752025092,1.31312719796049,1.1659233465194,0.556275906031529,0.341741761595705,1.03193433981611,0.555583582109135,0.753473828018764,0,0.457556346413045,0,0,0,0,2.84702394223022,3.45643094115643,2.59212817972323,4.39085421630384,5.02233896616208,4.31565908431426,4.54594006489348,0.785267825952089,1.16653475962614,0,0,0.598066184175915,1.48912641411388,0.972255941720238,2.32487682259916,2.87225413334323,1.99507305697782,1.5624526181274,0.314578033277133,0.241584120826006,0.288030006257865,0,1.01362607645082,0.616265742988964,0,0.358053391334963,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,3.09103350451505,1.87682475451182,3.29672923681077,1.71494703263253,0,7.90652579663893,8.74617949363636,12.6037012956667,9.6237782112465,8.22099023724771,4.5323633843382,9.45031500324528,6.75481804836331,7.25027854374727,10.8729665467882,0.415149390336707,0.798049746802062,0.853668028770671,0.972426868273176,0.419226325255965,1.83843508450014,0.888986911206461,0.824140228955577,1.92551525755089,0.758091635291392,1.2673964994512,1.69763707247469,0.561849044819294,1.15245274328765,2.41228969613576,0.476293691283074,1.27472758539341,0.77163688185482,1.64834360321323,0.735994600671987,1.02860775715625,0.887379030796687,0.715308569841963,0.872078499793971,1.12931256498397,1.01537529470012,1.09756783723664,0.263069711437843,0.950628796921032,1.12228454331548,0.355905054372522,0.788035859004508,0.818462086339379,0.929621047115796,0.771626443924566,2.74791635731741,0.701794825336225,0.859484216193193,0.382576664137687,1.10295709559758,0.463735671240843
|short_description=p3@Psd
}}

Latest revision as of 21:08, 25 September 2015

Short description:p3@Psd
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Psd_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -234bp_to_uc008htb.1_5end
EntrezGene:Psd
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Psd

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.53
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F13.02
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F25.63
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.07
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E87.36
hippocampus, neonate N00.CNhs11228.627-43G12.98
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I54.48
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D82.19
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F23.58
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H74.81
ovary, neonate N00.CNhs11217.1299-22I46.03
oviduct, adult pregnant day01.CNhs10500.988-6G69.90
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G92.58
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.85
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D42.59
stomach, embryo E17.CNhs11006.1035-18D54.39
stomach, embryo E18.CNhs10999.1286-20C65.02
stomach, neonate N03.CNhs11193.1340-24B84.32
stomach, neonate N07.CNhs11210.718-18A94.55
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B72.00
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E53.30
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.87e-0923
neuroblast (sensu Vertebrata)3.87e-0923

Uber anatomy
Ontology termp-valuen
gray matter3.78e-1534
regional part of nervous system3.03e-1454
neural tube6.65e-1252
neural rod6.65e-1252
future spinal cord6.65e-1252
neural keel6.65e-1252
occipital lobe1.73e-1110
visual cortex1.73e-1110
neocortex1.73e-1110
brain grey matter2.87e-1129
regional part of telencephalon2.87e-1129
telencephalon2.87e-1129
central nervous system6.20e-1173
anterior neural tube7.05e-1140
regional part of forebrain1.26e-1039
forebrain1.26e-1039
future forebrain1.26e-1039
nervous system2.73e-1075
brain1.40e-0947
future brain1.40e-0947
regional part of brain4.26e-0946
regional part of cerebral cortex6.57e-0917
neurectoderm9.29e-0964
neural plate9.29e-0964
presumptive neural plate9.29e-0964
pre-chordal neural plate1.81e-0849
cerebral cortex1.40e-0721
cerebral hemisphere1.40e-0721
pallium1.40e-0721
ectoderm-derived structure2.48e-0795
ectoderm2.48e-0795
presumptive ectoderm2.48e-0795
ecto-epithelium6.69e-0773
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