FFCP PHASE1:Hg19::chrX:51638566..51638578,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:51638566..51638578,+
|short_description=p9@MAGED1
|description=CAGE_peak_9_at_MAGED1_5end
|association_with_transcript=-173bp_to_ENST00000482599_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9500 | |EntrezGene=9500 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6813 | |HGNC=6813 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-173bp_to_ENST00000482599_5end | |||
|cluster_id=chrX:51638566..51638578,+ | |||
|description=CAGE_peak_9_at_MAGED1_5end | |||
|id=chrX:51638566..51638578,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.10e-20!180;CL:0000680!1.52e-11!57;CL:0000056!1.52e-11!57;CL:0000355!1.52e-11!57;CL:0000183!3.76e-11!59;CL:0000393!4.14e-11!60;CL:0000211!4.14e-11!60;CL:0000192!4.97e-11!42;CL:0000514!4.97e-11!42;CL:0000222!6.23e-11!119;CL:0000187!8.85e-11!54;CL:0000057!3.38e-09!75;CL:0000359!2.27e-08!32;CL:0002321!4.70e-08!248;CL:0000220!5.24e-08!246 | |||
|ontology_enrichment_celltype_v019=CL:0000192;2.45e-07;43!CL:0002334;8.24e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.27e-09,43;CL:0000514,2.27e-09,43;CL:0000680,6.88e-09,58;CL:0000056,6.88e-09,58;CL:0000355,6.88e-09,58;CL:0000393,4.05e-08,61;CL:0000211,4.05e-08,61;CL:0000187,4.64e-08,55;CL:0002539,2.41e-07,10;CL:0000359,3.33e-07,32;CL:0002334,4.47e-07,12;CL:0000057,6.58e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000514;2.45e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.09e-12!83;UBERON:0002329!1.09e-12!83;UBERON:0003077!1.09e-12!83;UBERON:0003059!1.09e-12!83;UBERON:0007282!1.09e-12!83;UBERON:0009618!1.09e-12!83;UBERON:0007285!1.09e-12!83;UBERON:0004290!9.00e-12!70;UBERON:0001637!6.60e-11!42;UBERON:0003509!6.60e-11!42;UBERON:0004572!6.60e-11!42;UBERON:0001134!1.34e-10!61;UBERON:0002036!1.34e-10!61;UBERON:0003082!1.34e-10!61;UBERON:0005256!2.67e-10!143;UBERON:0002385!3.29e-10!63;UBERON:0001015!3.29e-10!63;UBERON:0000383!3.29e-10!63;UBERON:0000475!3.66e-10!365;UBERON:0000119!1.08e-09!312;UBERON:0000483!1.40e-09!309;UBERON:0000486!3.60e-09!82;UBERON:0004573!2.02e-08!33;UBERON:0004571!2.02e-08!33;UBERON:0002049!5.48e-08!79;UBERON:0007798!5.48e-08!79;UBERON:0000490!7.40e-08!138;UBERON:0000477!7.58e-08!286;UBERON:0004872!1.13e-07!84;UBERON:0001981!5.14e-07!60;UBERON:0007500!5.14e-07!60;UBERON:0004537!5.14e-07!60;UBERON:0006965!5.14e-07!60;UBERON:0003914!8.89e-07!118 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,6.07e-10,78;UBERON:0007524,8.20e-10,73;UBERON:0002329,1.99e-09,71;UBERON:0003059,1.99e-09,71;UBERON:0007282,1.99e-09,71;UBERON:0004290,1.99e-09,71;UBERON:0009618,1.99e-09,71;UBERON:0003077,3.63e-09,72;UBERON:0007285,3.63e-09,72;UBERON:0001134,1.22e-08,62;UBERON:0002036,1.22e-08,62;UBERON:0003082,1.22e-08,62;UBERON:0002385,4.08e-08,64;UBERON:0001015,4.08e-08,64;UBERON:0000383,4.08e-08,64;UBERON:0000486,5.86e-08,83;UBERON:0001637,1.51e-07,42;UBERON:0003509,1.51e-07,42;UBERON:0004572,1.51e-07,42;UBERON:0004237,2.41e-07,10;UBERON:0004695,2.41e-07,10;UBERON:0002111,2.41e-07,10;UBERON:0004178,2.41e-07,10;UBERON:0005256,4.96e-07,122;UBERON:0001135,7.29e-07,15;UBERON:0003104,9.98e-07,160;UBERON:0009142,9.98e-07,160 | |||
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|phase1_expression=1.09007027562334,1.49870366723688,0.845726424575827,5.00366491765652,0,4.36169262050184,5.06599756336621,1.26343974685366,0.783556884599516,0.491467873003018,0,0.436882744260345,1.58260186937072,1.23766352960047,1.98838425436749,3.36162573225888,3.61616716814386,2.92124036154949,1.95173119516203,0.984968464614303,0.816002764977012,2.19418305034661,0.85870796139317,1.23186982565596,0.627713197974014,0.305653622991805,0.164201178899891,0.314843125254717,0,0,0.154816123316076,2.75826367343678,0,1.10926203050036,0.154934401160603,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0,0,0.950452044448374,0.301150238155546,0.127986611154418,0,0,0,0,0,0.144824403882799,0,1.34140171940727,0.12786256184353,1.44575660953827,1.00267582127178,1.44846518960824,0.795285947051099,0.486634870302636,0.567208902984407,2.66075276955077,0.87834785693126,0.261958150995425,0,0,0,0,0.26591592103773,0,0,0,0,0.860234595106124,0.694281003215189,0.56530794192401,0.838998872419812,1.92582629358047,1.25396979922086,0,0.35576626268671,0.33472061276467,0.402829317109147,0,0.24406205754817,0.367663080345869,0.81014194788176,0.357198913136319,0.22452937262617,0,0,1.89853131913626,0.732806975721629,0,0,0,0.993943903390637,0.886413581652058,0.926864265692532,2.0078563452417,2.4826786753885,2.24271040056923,5.33744978648525,3.45334567784024,0,0.404132016209064,0.163461903113459,0,2.30470369792,0,0.312160076830321,0,0.597794722207204,1.40921398372518,0.809364721840658,0.421352420106746,0.408308342509787,1.84251475967652,0.413303124703062,1.18800285728205,3.4617370098998,0,0.718618141816238,0.505008341862199,1.50142223846357,0.277064115484183,0,2.75839016219118,0.751190294532984,0.907457465280168,2.33206526395521,0.213557388818567,0.211931901159562,2.10063767259082,0.721367704669072,4.63752972082133,0.558350568994769,1.0126579934476,1.36411807225678,3.5340728394176,0.460249493211497,1.45481451136931,2.4850671476163,0.906768884048762,0.67824236924195,0,0,0,0.487894824518382,0.265059536642971,0.232387885739037,1.45125477021519,1.51392510525377,1.09493207722749,1.56449532329816,3.85944562915731,1.38134921352481,1.39310378409594,2.88751792667834,0.354920400119532,0.337169380156203,0.241011029883482,0.220587945464788,0,0.237270619111097,0,0.196221465125346,0,0,0,0.8231480226628,0,1.26755034821831,0,0,0.882926198829301,0.245976877086227,0.686271241194102,0.219500570817251,1.1240175325762,0.100528972411631,0.370353780634118,0.651616610620649,0,0,0.115930404975077,0.469634776943287,1.15493158208859,1.38895653772983,0.570762456703795,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.0895585227028483,0.290633938513962,0.766765358330422,0,0,0,0.288239906833923,0,0.253991577168676,0,0,0,0.822619941626588,0.600686115687835,0.571652865261156,0,1.30788020649984,0.66004457238855,0.646358578788889,0,2.535908257668,0.797814349754612,1.04007436911366,0.771622122786426,1.41849132023278,0.532844358032199,1.57275793023962,1.08524321078289,0.823240336780769,0,0.710783897485092,0.791951872933429,0.301439377059586,0.871533458600294,0.699810938274399,0,0.502257091432126,0,0,1.14861935834114,0,1.30303176000821,2.87666851570537,0.358121926479791,0.224170287987055,0,0.215627574859517,0,1.01637849688985,0,0,0.335032530668698,2.55175500661265,0,0,0,1.47229790062968,2.00068208423871,1.89885516589815,2.70362119990049,4.81758269752337,1.10391690523754,0.234282829985426,0.902838299183157,4.5481500811197,0,0,0.921845842708516,1.04260337361699,0.195801157462741,0.686286847621712,0,0,0.213455115606889,0.303127571446259,3.32870879020994,3.0239029332968,1.48864684691266,0.767309866440312,5.61320188866147,0.512556597022804,1.53512174720011,2.41280881715411,2.96836132889982,2.31314540703983,1.24293207719189,0.410635780069046,3.11552657510173,1.62694529843943,0.483437798366489,2.00506470303285,0,0.574072240823034,1.45672934405374,2.75361271414791,0.902399225814824,0.15403067420883,0,0,0.316654886678627,2.27466768141793,0.850468526382578,0.431831832204279,3.08454505380579,0.541892875087706,1.00337954770971,0.254876273045038,1.66215201785745,0,0,0,0.256450125116389,0.656029291399411,0.325378394664303,0.103041011647722,1.00726411300178,0.660075999364704,0.574265537996172,1.30012049207304,1.6068392984416,0.48335359146061,0.770243085573222,1.22802939780904,0.827019434907183,0.644521469209642,2.32026710262766,0.255679882248303,0.534192213880424,0.165284915360978,0.192190067365106,0,0.10115778085555,1.85938219718914,2.51849877464512,0,0.924100740528266,1.59691809095107,1.73986598415015,1.66791797193528,0.715624433709956,0.372158369359667,0.632758849437452,0.38126038784765,0.767693373934002,1.28381696410176,0.636406495851874,2.35484592059769,0.359744915166629,3.84351841630477,1.53156123049392,0.202182481573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| ||
|short_description=p9@MAGED1 | |||
}} | }} |
Latest revision as of 23:07, 15 September 2015
Short description: | p9@MAGED1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MAGED1_5end |
Coexpression cluster: | NA |
Association with transcript: | -173bp_to_ENST00000482599_5end |
EntrezGene: | MAGED1 |
HGNC: | 6813 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.27e-09 | 43 |
smooth muscle myoblast | 2.27e-09 | 43 |
muscle precursor cell | 6.88e-09 | 58 |
myoblast | 6.88e-09 | 58 |
multi-potent skeletal muscle stem cell | 6.88e-09 | 58 |
electrically responsive cell | 4.05e-08 | 61 |
electrically active cell | 4.05e-08 | 61 |
muscle cell | 4.64e-08 | 55 |
aortic smooth muscle cell | 2.41e-07 | 10 |
vascular associated smooth muscle cell | 3.33e-07 | 32 |
preadipocyte | 4.47e-07 | 12 |
fibroblast | 6.58e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 6.07e-10 | 78 |
dense mesenchyme tissue | 8.20e-10 | 73 |
somite | 1.99e-09 | 71 |
presomitic mesoderm | 1.99e-09 | 71 |
presumptive segmental plate | 1.99e-09 | 71 |
dermomyotome | 1.99e-09 | 71 |
trunk paraxial mesoderm | 1.99e-09 | 71 |
paraxial mesoderm | 3.63e-09 | 72 |
presumptive paraxial mesoderm | 3.63e-09 | 72 |
skeletal muscle tissue | 1.22e-08 | 62 |
striated muscle tissue | 1.22e-08 | 62 |
myotome | 1.22e-08 | 62 |
muscle tissue | 4.08e-08 | 64 |
musculature | 4.08e-08 | 64 |
musculature of body | 4.08e-08 | 64 |
multilaminar epithelium | 5.86e-08 | 83 |
artery | 1.51e-07 | 42 |
arterial blood vessel | 1.51e-07 | 42 |
arterial system | 1.51e-07 | 42 |
blood vessel smooth muscle | 2.41e-07 | 10 |
arterial system smooth muscle | 2.41e-07 | 10 |
artery smooth muscle tissue | 2.41e-07 | 10 |
aorta smooth muscle tissue | 2.41e-07 | 10 |
trunk mesenchyme | 4.96e-07 | 122 |
smooth muscle tissue | 7.29e-07 | 15 |
mesenchyme | 9.98e-07 | 160 |
entire embryonic mesenchyme | 9.98e-07 | 160 |