FFCP PHASE1:Mm9::chr1:179377484..179377506,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=923|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:179377484..179377506,+|id=chr1:179377484..179377506,+|ontology_enrichment_celltype=CL:0000540!3.72e-14!33;CL:0000047!3.72e-14!33;CL:0000031!3.72e-14!33;CL:0000404!3.72e-14!33;CL:0000221!5.21e-12!44;CL:0000133!5.21e-12!44;CL:0002319!1.89e-11!43;CL:0000393!1.35e-10!39;CL:0000211!1.35e-10!39;CL:0000055!1.64e-09!50;CL:0000107!1.82e-09!9;CL:0002609!5.05e-07!6;CL:0000117!6.94e-07!23;CL:0000337!6.94e-07!23|ontology_enrichment_celltype_v019_2=CL:0002609,2.82e-14,6;CL:0000107,9.64e-13,9;CL:0000540,2.56e-12,33;CL:0000047,2.56e-12,33;CL:0000031,2.56e-12,33;CL:0000404,2.56e-12,33;CL:0000393,4.47e-10,39;CL:0000211,4.47e-10,39;CL:0002319,6.26e-09,43;CL:0000221,1.12e-08,44;CL:0000133,1.12e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.79e-19!73;UBERON:0005743!1.79e-19!73;UBERON:0000073!2.26e-19!75;UBERON:0001016!2.26e-19!75;UBERON:0004121!1.46e-14!102;UBERON:0000924!1.46e-14!102;UBERON:0006601!1.46e-14!102;UBERON:0002791!1.54e-14!29;UBERON:0003528!1.54e-14!29;UBERON:0001893!1.54e-14!29;UBERON:0002020!1.98e-14!34;UBERON:0000956!2.55e-14!21;UBERON:0001869!2.55e-14!21;UBERON:0000203!2.55e-14!21;UBERON:0002616!4.57e-14!49;UBERON:0000955!1.49e-13!50;UBERON:0006238!1.49e-13!50;UBERON:0002780!2.38e-13!39;UBERON:0001890!2.38e-13!39;UBERON:0006240!2.38e-13!39;UBERON:0001049!5.20e-13!52;UBERON:0005068!5.20e-13!52;UBERON:0006241!5.20e-13!52;UBERON:0007135!5.20e-13!52;UBERON:0000033!5.49e-13!63;UBERON:0003080!9.04e-13!40;UBERON:0002346!5.11e-12!71;UBERON:0003075!5.11e-12!71;UBERON:0007284!5.11e-12!71;UBERON:0003056!6.66e-12!49;UBERON:0002619!1.86e-10!17;UBERON:0007811!6.29e-10!86;UBERON:0002410!1.82e-09!9;UBERON:0000010!1.81e-08!11;UBERON:0000153!5.68e-08!94|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.74e-29,21;UBERON:0001869,1.74e-29,21;UBERON:0000203,1.74e-29,21;UBERON:0003528,1.48e-23,29;UBERON:0002791,1.48e-23,29;UBERON:0001893,1.48e-23,29;UBERON:0001017,1.52e-22,73;UBERON:0001016,7.92e-22,75;UBERON:0002020,1.19e-19,34;UBERON:0002619,1.87e-18,17;UBERON:0002616,2.80e-18,46;UBERON:0000955,8.11e-18,47;UBERON:0006238,8.11e-18,47;UBERON:0002346,8.52e-18,64;UBERON:0003075,8.52e-18,64;UBERON:0007284,8.52e-18,64;UBERON:0000073,5.66e-17,54;UBERON:0002780,9.51e-17,39;UBERON:0001890,9.51e-17,39;UBERON:0006240,9.51e-17,39;UBERON:0004121,2.59e-16,95;UBERON:0000924,2.59e-16,95;UBERON:0006601,2.59e-16,95;UBERON:0003080,2.97e-16,40;UBERON:0001049,8.95e-16,52;UBERON:0005068,8.95e-16,52;UBERON:0006241,8.95e-16,52;UBERON:0007135,8.95e-16,52;UBERON:0010371,4.10e-15,73;UBERON:0002410,9.64e-13,9;UBERON:0003056,1.02e-12,49;UBERON:0002021,7.81e-12,10;UBERON:0000411,7.81e-12,10;UBERON:0001950,7.81e-12,10;UBERON:0010313,2.95e-11,3;UBERON:0002342,2.95e-11,3;UBERON:0002005,2.95e-11,3;UBERON:0005428,2.95e-11,3;UBERON:0005062,2.95e-11,3;UBERON:0010314,3.60e-11,92;UBERON:0000010,2.52e-10,11;UBERON:0001954,4.97e-08,7;UBERON:0003022,4.97e-08,7;UBERON:0002421,4.97e-08,7;UBERON:0000349,4.97e-08,7;UBERON:0002600,4.97e-08,7|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,1.39912375625629,0,0.137114433605739,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,4.56234294157302,5.94026128659439,2.52389953621658,0,0,2.08234358665422,0.287536413054709,1.83843757322004,0,1.0214987046815,0.768032666281217,0.263772575460388,0.182975287204819,0,0.558365998002762,0,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0,0.151143120213571,0,0.860423876981386,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22058876712702,6.28340120440365,0,0,0,0,0,0,1.00523481690292,1.91206752211504,2.30143911597297,0.20778804455956,0.324482526135515,0.203678727700633,0,0,0.210441855886474,0.130120442962704,0,0,0,0.136072998302656,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,3.99550902271842,4.83651678182637,0,0,0,0.232236671860439,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0.252470927204373,3.47059041357882,2.34263246577983,6.24727853425117,1.19484398976276,0.668396022247182,0.566153061577665,0.809621403349789,1.46127928955656,1.18586333383957,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0,0.316335993581135,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,1.6942555278512,5.52390283808612,4.01026859407578,2.92150409984269,0,3.0215755895588,0.675022500231806,0.900642406448441,0,1.55328093525546,0.103787347584177,0,0,0,0.419226325255965,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.0936415074698824,0.320125762024346,0.34461281373368,0.476293691283074,0,0.38581844092741,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0,0.188218760830661,0.25384382367503,0.548783918618318,0.263069711437843,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0.309873682371932,0,0.499621155875892,0,0.214871054048298,0,0,0|short_description=p@chr1:179377484..179377506,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=923 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:179377484..179377506,+ | |||
|description=CAGE_peak_at_chr1:179377484..179377506,+ | |||
|id=chr1:179377484..179377506,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.72e-14!33;CL:0000047!3.72e-14!33;CL:0000031!3.72e-14!33;CL:0000404!3.72e-14!33;CL:0000221!5.21e-12!44;CL:0000133!5.21e-12!44;CL:0002319!1.89e-11!43;CL:0000393!1.35e-10!39;CL:0000211!1.35e-10!39;CL:0000055!1.64e-09!50;CL:0000107!1.82e-09!9;CL:0002609!5.05e-07!6;CL:0000117!6.94e-07!23;CL:0000337!6.94e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,2.82e-14,6;CL:0000107,9.64e-13,9;CL:0000540,2.56e-12,33;CL:0000047,2.56e-12,33;CL:0000031,2.56e-12,33;CL:0000404,2.56e-12,33;CL:0000393,4.47e-10,39;CL:0000211,4.47e-10,39;CL:0002319,6.26e-09,43;CL:0000221,1.12e-08,44;CL:0000133,1.12e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.79e-19!73;UBERON:0005743!1.79e-19!73;UBERON:0000073!2.26e-19!75;UBERON:0001016!2.26e-19!75;UBERON:0004121!1.46e-14!102;UBERON:0000924!1.46e-14!102;UBERON:0006601!1.46e-14!102;UBERON:0002791!1.54e-14!29;UBERON:0003528!1.54e-14!29;UBERON:0001893!1.54e-14!29;UBERON:0002020!1.98e-14!34;UBERON:0000956!2.55e-14!21;UBERON:0001869!2.55e-14!21;UBERON:0000203!2.55e-14!21;UBERON:0002616!4.57e-14!49;UBERON:0000955!1.49e-13!50;UBERON:0006238!1.49e-13!50;UBERON:0002780!2.38e-13!39;UBERON:0001890!2.38e-13!39;UBERON:0006240!2.38e-13!39;UBERON:0001049!5.20e-13!52;UBERON:0005068!5.20e-13!52;UBERON:0006241!5.20e-13!52;UBERON:0007135!5.20e-13!52;UBERON:0000033!5.49e-13!63;UBERON:0003080!9.04e-13!40;UBERON:0002346!5.11e-12!71;UBERON:0003075!5.11e-12!71;UBERON:0007284!5.11e-12!71;UBERON:0003056!6.66e-12!49;UBERON:0002619!1.86e-10!17;UBERON:0007811!6.29e-10!86;UBERON:0002410!1.82e-09!9;UBERON:0000010!1.81e-08!11;UBERON:0000153!5.68e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.74e-29,21;UBERON:0001869,1.74e-29,21;UBERON:0000203,1.74e-29,21;UBERON:0003528,1.48e-23,29;UBERON:0002791,1.48e-23,29;UBERON:0001893,1.48e-23,29;UBERON:0001017,1.52e-22,73;UBERON:0001016,7.92e-22,75;UBERON:0002020,1.19e-19,34;UBERON:0002619,1.87e-18,17;UBERON:0002616,2.80e-18,46;UBERON:0000955,8.11e-18,47;UBERON:0006238,8.11e-18,47;UBERON:0002346,8.52e-18,64;UBERON:0003075,8.52e-18,64;UBERON:0007284,8.52e-18,64;UBERON:0000073,5.66e-17,54;UBERON:0002780,9.51e-17,39;UBERON:0001890,9.51e-17,39;UBERON:0006240,9.51e-17,39;UBERON:0004121,2.59e-16,95;UBERON:0000924,2.59e-16,95;UBERON:0006601,2.59e-16,95;UBERON:0003080,2.97e-16,40;UBERON:0001049,8.95e-16,52;UBERON:0005068,8.95e-16,52;UBERON:0006241,8.95e-16,52;UBERON:0007135,8.95e-16,52;UBERON:0010371,4.10e-15,73;UBERON:0002410,9.64e-13,9;UBERON:0003056,1.02e-12,49;UBERON:0002021,7.81e-12,10;UBERON:0000411,7.81e-12,10;UBERON:0001950,7.81e-12,10;UBERON:0010313,2.95e-11,3;UBERON:0002342,2.95e-11,3;UBERON:0002005,2.95e-11,3;UBERON:0005428,2.95e-11,3;UBERON:0005062,2.95e-11,3;UBERON:0010314,3.60e-11,92;UBERON:0000010,2.52e-10,11;UBERON:0001954,4.97e-08,7;UBERON:0003022,4.97e-08,7;UBERON:0002421,4.97e-08,7;UBERON:0000349,4.97e-08,7;UBERON:0002600,4.97e-08,7 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,1.39912375625629,0,0.137114433605739,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,4.56234294157302,5.94026128659439,2.52389953621658,0,0,2.08234358665422,0.287536413054709,1.83843757322004,0,1.0214987046815,0.768032666281217,0.263772575460388,0.182975287204819,0,0.558365998002762,0,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0,0.151143120213571,0,0.860423876981386,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22058876712702,6.28340120440365,0,0,0,0,0,0,1.00523481690292,1.91206752211504,2.30143911597297,0.20778804455956,0.324482526135515,0.203678727700633,0,0,0.210441855886474,0.130120442962704,0,0,0,0.136072998302656,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,3.99550902271842,4.83651678182637,0,0,0,0.232236671860439,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0.252470927204373,3.47059041357882,2.34263246577983,6.24727853425117,1.19484398976276,0.668396022247182,0.566153061577665,0.809621403349789,1.46127928955656,1.18586333383957,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0,0.316335993581135,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,1.6942555278512,5.52390283808612,4.01026859407578,2.92150409984269,0,3.0215755895588,0.675022500231806,0.900642406448441,0,1.55328093525546,0.103787347584177,0,0,0,0.419226325255965,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.0936415074698824,0.320125762024346,0.34461281373368,0.476293691283074,0,0.38581844092741,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0,0.188218760830661,0.25384382367503,0.548783918618318,0.263069711437843,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0.309873682371932,0,0.499621155875892,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr1:179377484..179377506,+ | |||
}} |
Latest revision as of 09:08, 5 August 2015
Short description: | p@chr1:179377484..179377506, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:179377484..179377506, + |
Coexpression cluster: | MCL_coexpression_mm9:923 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 2.82e-14 | 6 |
autonomic neuron | 9.64e-13 | 9 |
neuron | 2.56e-12 | 33 |
neuronal stem cell | 2.56e-12 | 33 |
neuroblast | 2.56e-12 | 33 |
electrically signaling cell | 2.56e-12 | 33 |
electrically responsive cell | 4.47e-10 | 39 |
electrically active cell | 4.47e-10 | 39 |
neural cell | 6.26e-09 | 43 |
ectodermal cell | 1.12e-08 | 44 |
neurectodermal cell | 1.12e-08 | 44 |