FFCP PHASE1:Hg19::chr7:114562172..114562243,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29969 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28870 | |||
|TSSclassifier=strong | |||
|UniProt=Q9P1T7 | |||
|association_with_transcript=0bp_to_ENST00000257724,ENST00000393486,NM_001166345,NM_001166346,NM_199072,uc003vhf.2_5end | |||
|cluster_id=chr7:114562172..114562243,+ | |||
|description=CAGE_peak_3_at_MDFIC_5end | |||
|id=chr7:114562172..114562243,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.42e-10!180;CL:0000136!2.50e-08!15;CL:0000057!1.13e-07!75;CL:0002194!2.44e-07!63;CL:0000576!2.44e-07!63;CL:0000040!2.44e-07!63;CL:0000559!2.44e-07!63;CL:0002009!8.00e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.02e-07;13!CL:0000473;1.38e-07;39!CL:0000234;1.38e-07;39!CL:0000860;5.96e-07;33!CL:0002057;5.96e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.08e-08,59;CL:0000576,1.08e-08,59;CL:0000040,1.08e-08,59;CL:0000559,1.08e-08,59;CL:0000136,1.72e-08,15;CL:0002009,5.82e-08,61;CL:0000057,6.83e-08,76;CL:0000048,1.21e-07,427;CL:0000473,7.64e-07,48;CL:0000234,7.64e-07,48;CL:0000723,8.90e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!8.96e-13!167;UBERON:0000468!1.67e-09!659;UBERON:0000926!2.23e-09!448;UBERON:0004120!2.23e-09!448;UBERON:0006603!2.23e-09!448;UBERON:0000467!9.20e-09!625;UBERON:0000480!1.46e-08!626;UBERON:0000914!8.51e-08!83;UBERON:0002329!8.51e-08!83;UBERON:0003077!8.51e-08!83;UBERON:0003059!8.51e-08!83;UBERON:0007282!8.51e-08!83;UBERON:0009618!8.51e-08!83;UBERON:0007285!8.51e-08!83;UBERON:0000062!1.32e-07!511;UBERON:0000479!3.05e-07!787;UBERON:0002050!6.50e-07!605;UBERON:0005423!6.50e-07!605;UBERON:0000922!9.94e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;7.55e-07;31!UBERON:0001015;7.55e-07;31!UBERON:0000383;7.55e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.38e-15,167;UBERON:0000926,2.53e-12,315;UBERON:0004120,2.53e-12,315;UBERON:0006603,2.53e-12,315;UBERON:0000479,1.86e-07,773;UBERON:0001434,2.02e-07,100;UBERON:0002385,4.47e-07,64;UBERON:0001015,4.47e-07,64;UBERON:0000383,4.47e-07,64;UBERON:0001134,6.62e-07,62;UBERON:0002036,6.62e-07,62;UBERON:0003082,6.62e-07,62;UBERON:0007524,7.39e-07,73;UBERON:0002329,7.71e-07,71;UBERON:0003059,7.71e-07,71;UBERON:0007282,7.71e-07,71;UBERON:0004290,7.71e-07,71;UBERON:0009618,7.71e-07,71;UBERON:0003077,8.09e-07,72;UBERON:0007285,8.09e-07,72 | |||
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| |||
|short_description=p3@MDFIC | |||
}} |
Latest revision as of 06:21, 25 September 2015
Short description: | p3@MDFIC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MDFIC_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000257724, ENST00000393486, NM_001166345, NM_001166346, NM_199072, uc003vhf.2_5end |
EntrezGene: | MDFIC |
HGNC: | 28870 |
UniProt: | Q9P1T7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.08e-08 | 59 |
monocyte | 1.08e-08 | 59 |
monoblast | 1.08e-08 | 59 |
promonocyte | 1.08e-08 | 59 |
fat cell | 1.72e-08 | 15 |
macrophage dendritic cell progenitor | 5.82e-08 | 61 |
fibroblast | 6.83e-08 | 76 |
multi fate stem cell | 1.21e-07 | 427 |
defensive cell | 7.64e-07 | 48 |
phagocyte | 7.64e-07 | 48 |
somatic stem cell | 8.90e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 5.38e-15 | 167 |
mesoderm | 2.53e-12 | 315 |
mesoderm-derived structure | 2.53e-12 | 315 |
presumptive mesoderm | 2.53e-12 | 315 |
tissue | 1.86e-07 | 773 |
skeletal system | 2.02e-07 | 100 |
muscle tissue | 4.47e-07 | 64 |
musculature | 4.47e-07 | 64 |
musculature of body | 4.47e-07 | 64 |
skeletal muscle tissue | 6.62e-07 | 62 |
striated muscle tissue | 6.62e-07 | 62 |
myotome | 6.62e-07 | 62 |
dense mesenchyme tissue | 7.39e-07 | 73 |
somite | 7.71e-07 | 71 |
presomitic mesoderm | 7.71e-07 | 71 |
presumptive segmental plate | 7.71e-07 | 71 |
dermomyotome | 7.71e-07 | 71 |
trunk paraxial mesoderm | 7.71e-07 | 71 |
paraxial mesoderm | 8.09e-07 | 72 |
presumptive paraxial mesoderm | 8.09e-07 | 72 |