FFCP PHASE1:Mm9::chr2:22895612..22895647,-: Difference between revisions
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{{FFCP|EntrezGene=11308|HGNC=|MCL_coexpression_id=36|UniProt=Q8CBW3,B7ZCU2|association_with_transcript=0bp_to_ENSMUST00000123948,ENSMUST00000153931_5end|description=CAGE_peak_2_at_Abi1_5end|id=chr2:22895612..22895647,-|ontology_enrichment_celltype=CL:0000838!1.20e-08!12;CL:0000542!1.23e-08!13;CL:0000051!1.23e-08!13;CL:0000738!2.20e-08!17;CL:0002087!2.20e-08!17;CL:0000084!5.20e-08!11;CL:0000827!5.20e-08!11;CL:0000988!1.22e-07!32;CL:0002032!1.22e-07!32;CL:0000037!1.22e-07!32;CL:0000566!1.22e-07!32;CL:0000837!1.22e-07!32;CL:0000791!3.12e-07!9;CL:0000789!3.12e-07!9;CL:0002420!3.12e-07!9;CL:0002419!3.12e-07!9;CL:0000790!3.12e-07!9|ontology_enrichment_celltype_v019_2=CL:0000838,1.20e-08,12;CL:0000542,1.23e-08,13;CL:0000051,1.23e-08,13;CL:0000738,2.20e-08,17;CL:0002087,2.20e-08,17;CL:0000084,5.20e-08,11;CL:0000827,5.20e-08,11;CL:0000988,1.21e-07,32;CL:0002032,1.21e-07,32;CL:0000037,1.21e-07,32;CL:0000837,1.21e-07,32;CL:0000791,3.12e-07,9;CL:0000789,3.12e-07,9;CL:0002420,3.12e-07,9;CL:0002419,3.12e-07,9;CL:0000790,3.12e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.81e-13!48;UBERON:0002390!4.16e-12!45;UBERON:0003061!4.16e-12!45;UBERON:0003081!1.87e-10!88;UBERON:0004177!1.86e-09!29;UBERON:0001004!3.85e-08!42;UBERON:0003408!4.05e-08!24;UBERON:0002370!5.42e-08!23;UBERON:0000974!5.42e-08!23;UBERON:0004807!5.42e-08!23;UBERON:0005058!5.42e-08!23;UBERON:0003351!5.42e-08!23;UBERON:0009113!5.42e-08!23;UBERON:0003295!5.42e-08!23;UBERON:0009722!5.42e-08!23;UBERON:0005562!5.42e-08!23;UBERON:0007690!5.42e-08!23;UBERON:0000065!5.54e-08!41;UBERON:0006562!1.73e-07!24;UBERON:0001557!1.73e-07!24;UBERON:0001042!1.73e-07!24;UBERON:0008814!1.73e-07!24;UBERON:0009145!1.73e-07!24;UBERON:0000926!9.52e-07!193;UBERON:0004120!9.52e-07!193;UBERON:0006603!9.52e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.79e-13,48;UBERON:0002405,5.79e-13,48;UBERON:0002390,4.14e-12,45;UBERON:0003061,4.14e-12,45;UBERON:0003081,5.98e-10,87;UBERON:0004177,1.85e-09,29;UBERON:0005057,1.85e-09,29;UBERON:0000926,6.07e-09,120;UBERON:0004120,6.07e-09,120;UBERON:0006603,6.07e-09,120;UBERON:0000077,1.90e-08,35;UBERON:0001004,3.84e-08,42;UBERON:0003408,4.03e-08,24;UBERON:0002370,5.39e-08,23;UBERON:0000974,5.39e-08,23;UBERON:0004807,5.39e-08,23;UBERON:0005058,5.39e-08,23;UBERON:0003351,5.39e-08,23;UBERON:0009113,5.39e-08,23;UBERON:0003295,5.39e-08,23;UBERON:0009722,5.39e-08,23;UBERON:0005562,5.39e-08,23;UBERON:0007690,5.39e-08,23;UBERON:0000065,5.52e-08,41;UBERON:0006562,1.72e-07,24;UBERON:0001557,1.72e-07,24;UBERON:0001042,1.72e-07,24;UBERON:0008814,1.72e-07,24;UBERON:0009145,1.72e-07,24|phase1_expression=10.7299727560212,10.4692622291808,11.3749809847384,2.11724947914781,4.00716583957078,10.2406355866253,7.94282978024787,57.3307556080599,70.535149797985,57.3458089488884,35.4421194226795,33.1852181420599,56.4962408772979,50.0918905860855,9.66018309265422,12.3509913107794,3.49780939064073,44.9533585635489,41.2714445153274,34.3755617956405,9.60989178707088,23.6312463858107,24.291580389921,16.1592347021341,11.9292826154928,11.4846392823004,13.7843838770904,14.0056301245828,6.65081968097309,4.28451220591882,8.64748991555688,1.90509202037889,1.84519436275371,0,6.06588401477677,3.32469290716985,6.12508068787107,23.8563029520037,14.8453715459522,21.4644735029257,31.7645003536748,24.589637458504,19.9059244742773,7.93149953246137,8.41428529121971,6.79122982998222,1.56478268869608,4.57852828398938,6.81027166476863,6.02732687130279,4.05960622713551,0,51.0059122415519,57.3036092188962,63.5217280379257,15.9500850342287,14.8997388768154,22.6895720602075,11.5320382689971,9.52183762689659,5.07065122804943,2.03306719241479,0.889294796111139,21.5975932147536,22.7439263390404,14.9200824138681,12.2836045312546,6.53171119046643,9.33206510776299,5.94026128659439,6.73039876324422,11.7116903605559,14.7981922437581,5.63457676388789,8.05101956553185,5.51531271966013,5.50579404996943,13.2794831608595,11.981309593987,11.0784481693363,11.8019060247108,9.37644067002168,7.53794097303729,5.6276261003168,8.86229837105499,11.7851434189467,14.5219114415085,9.13357284543973,12.7977266733081,8.31287161174641,26.087803983151,6.0229671388697,4.75979933595425,1.61910957491345,5.19821133958135,3.58421509677868,10.1119982494861,13.6344258062446,6.23486411046885,7.42013106471715,7.32385782838739,7.69958864485907,5.09610479413291,0,3.030874574157,4.30711771307668,3.53867111510348,11.5325718516251,95.8070169494535,9.79718117827843,7.98032503124225,10.3518262626128,6.22661842591358,7.83757730873637,17.1679512418129,9.17366116706631,9.14621380617183,16.33972733195,15.0383793831479,11.6472131962135,14.3546986999256,19.3950101254089,16.775258509631,6.44117753425404,12.3573557019938,4.08731288333746,32.8293441146222,19.196887391789,26.3035370041244,12.4326230706003,10.980014467647,13.0680526197379,12.1677024134594,11.7629110371952,9.14267396062064,13.6282660976916,17.4145312184041,19.9051152976149,11.3725241295154,8.62811609134543,9.49879233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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11308 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CBW3,B7ZCU2 | |||
|association_with_transcript=0bp_to_ENSMUST00000123948,ENSMUST00000153931_5end | |||
|cluster_id=chr2:22895612..22895647,- | |||
|description=CAGE_peak_2_at_Abi1_5end | |||
|id=chr2:22895612..22895647,- | |||
|ontology_enrichment_celltype=CL:0000838!1.20e-08!12;CL:0000542!1.23e-08!13;CL:0000051!1.23e-08!13;CL:0000738!2.20e-08!17;CL:0002087!2.20e-08!17;CL:0000084!5.20e-08!11;CL:0000827!5.20e-08!11;CL:0000988!1.22e-07!32;CL:0002032!1.22e-07!32;CL:0000037!1.22e-07!32;CL:0000566!1.22e-07!32;CL:0000837!1.22e-07!32;CL:0000791!3.12e-07!9;CL:0000789!3.12e-07!9;CL:0002420!3.12e-07!9;CL:0002419!3.12e-07!9;CL:0000790!3.12e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.20e-08,12;CL:0000542,1.23e-08,13;CL:0000051,1.23e-08,13;CL:0000738,2.20e-08,17;CL:0002087,2.20e-08,17;CL:0000084,5.20e-08,11;CL:0000827,5.20e-08,11;CL:0000988,1.21e-07,32;CL:0002032,1.21e-07,32;CL:0000037,1.21e-07,32;CL:0000837,1.21e-07,32;CL:0000791,3.12e-07,9;CL:0000789,3.12e-07,9;CL:0002420,3.12e-07,9;CL:0002419,3.12e-07,9;CL:0000790,3.12e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.81e-13!48;UBERON:0002390!4.16e-12!45;UBERON:0003061!4.16e-12!45;UBERON:0003081!1.87e-10!88;UBERON:0004177!1.86e-09!29;UBERON:0001004!3.85e-08!42;UBERON:0003408!4.05e-08!24;UBERON:0002370!5.42e-08!23;UBERON:0000974!5.42e-08!23;UBERON:0004807!5.42e-08!23;UBERON:0005058!5.42e-08!23;UBERON:0003351!5.42e-08!23;UBERON:0009113!5.42e-08!23;UBERON:0003295!5.42e-08!23;UBERON:0009722!5.42e-08!23;UBERON:0005562!5.42e-08!23;UBERON:0007690!5.42e-08!23;UBERON:0000065!5.54e-08!41;UBERON:0006562!1.73e-07!24;UBERON:0001557!1.73e-07!24;UBERON:0001042!1.73e-07!24;UBERON:0008814!1.73e-07!24;UBERON:0009145!1.73e-07!24;UBERON:0000926!9.52e-07!193;UBERON:0004120!9.52e-07!193;UBERON:0006603!9.52e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.79e-13,48;UBERON:0002405,5.79e-13,48;UBERON:0002390,4.14e-12,45;UBERON:0003061,4.14e-12,45;UBERON:0003081,5.98e-10,87;UBERON:0004177,1.85e-09,29;UBERON:0005057,1.85e-09,29;UBERON:0000926,6.07e-09,120;UBERON:0004120,6.07e-09,120;UBERON:0006603,6.07e-09,120;UBERON:0000077,1.90e-08,35;UBERON:0001004,3.84e-08,42;UBERON:0003408,4.03e-08,24;UBERON:0002370,5.39e-08,23;UBERON:0000974,5.39e-08,23;UBERON:0004807,5.39e-08,23;UBERON:0005058,5.39e-08,23;UBERON:0003351,5.39e-08,23;UBERON:0009113,5.39e-08,23;UBERON:0003295,5.39e-08,23;UBERON:0009722,5.39e-08,23;UBERON:0005562,5.39e-08,23;UBERON:0007690,5.39e-08,23;UBERON:0000065,5.52e-08,41;UBERON:0006562,1.72e-07,24;UBERON:0001557,1.72e-07,24;UBERON:0001042,1.72e-07,24;UBERON:0008814,1.72e-07,24;UBERON:0009145,1.72e-07,24 | |||
|phase1_expression=10.7299727560212,10.4692622291808,11.3749809847384,2.11724947914781,4.00716583957078,10.2406355866253,7.94282978024787,57.3307556080599,70.535149797985,57.3458089488884,35.4421194226795,33.1852181420599,56.4962408772979,50.0918905860855,9.66018309265422,12.3509913107794,3.49780939064073,44.9533585635489,41.2714445153274,34.3755617956405,9.60989178707088,23.6312463858107,24.291580389921,16.1592347021341,11.9292826154928,11.4846392823004,13.7843838770904,14.0056301245828,6.65081968097309,4.28451220591882,8.64748991555688,1.90509202037889,1.84519436275371,0,6.06588401477677,3.32469290716985,6.12508068787107,23.8563029520037,14.8453715459522,21.4644735029257,31.7645003536748,24.589637458504,19.9059244742773,7.93149953246137,8.41428529121971,6.79122982998222,1.56478268869608,4.57852828398938,6.81027166476863,6.02732687130279,4.05960622713551,0,51.0059122415519,57.3036092188962,63.5217280379257,15.9500850342287,14.8997388768154,22.6895720602075,11.5320382689971,9.52183762689659,5.07065122804943,2.03306719241479,0.889294796111139,21.5975932147536,22.7439263390404,14.9200824138681,12.2836045312546,6.53171119046643,9.33206510776299,5.94026128659439,6.73039876324422,11.7116903605559,14.7981922437581,5.63457676388789,8.05101956553185,5.51531271966013,5.50579404996943,13.2794831608595,11.981309593987,11.0784481693363,11.8019060247108,9.37644067002168,7.53794097303729,5.6276261003168,8.86229837105499,11.7851434189467,14.5219114415085,9.13357284543973,12.7977266733081,8.31287161174641,26.087803983151,6.0229671388697,4.75979933595425,1.61910957491345,5.19821133958135,3.58421509677868,10.1119982494861,13.6344258062446,6.23486411046885,7.42013106471715,7.32385782838739,7.69958864485907,5.09610479413291,0,3.030874574157,4.30711771307668,3.53867111510348,11.5325718516251,95.8070169494535,9.79718117827843,7.98032503124225,10.3518262626128,6.22661842591358,7.83757730873637,17.1679512418129,9.17366116706631,9.14621380617183,16.33972733195,15.0383793831479,11.6472131962135,14.3546986999256,19.3950101254089,16.775258509631,6.44117753425404,12.3573557019938,4.08731288333746,32.8293441146222,19.196887391789,26.3035370041244,12.4326230706003,10.980014467647,13.0680526197379,12.1677024134594,11.7629110371952,9.14267396062064,13.6282660976916,17.4145312184041,19.9051152976149,11.3725241295154,8.62811609134543,9.49879233627737,7.58676944630461,10.4436035287103,12.2070902446929,12.1104968489364,11.4021211053516,11.2442069471675,10.8655415710387,10.1316956678436,9.64441008855878,10.381116325673,8.11024209982027,7.78532297831674,16.3678518265418,10.906453229621,11.3449532086541,24.5774615559632,20.3304846620625,21.0280989552739,9.11353399156208,11.2572508790926,9.18316513451176,16.3353867553795,11.0187969778546,12.9584374825398,11.1616293480196,9.65784245038629,15.5297905348335,9.70903114489535,18.5509234409378,13.8627664323413,12.5731989185786,16.4662586468288,13.1522290385164,25.6553737248235,15.6415010816512,6.27795687669216,4.23120906661671,14.0770245353254,10.2184135618593,11.3403365963442,9.88249270654378,7.33847544688072,6.27744566171445,10.4396393539793,8.89374355509659,8.79673230800943,6.56556357735798,8.77338392036041,10.7858329038507,9.29393614461185,8.76221602319216,13.0870851657626,11.3106027483632,24.7957018480777,10.1825663922657,12.6069116658957,13.1855341393799,12.6473074248515,11.9564219863478,10.047918581848,10.8589504251184,6.22550516883013,6.34011401721157,6.87956482896211,5.39669069723649,7.1001042485976,6.02942899381042,7.89340140522401,11.7955416354832,15.0785760900783,8.78596522201861,17.2521847832825,13.3970741160661,13.1055822708115,9.09283960609602,7.3552939543984,14.9557491622644,28.2672380954905,10.6115190591471,12.548303186036,8.99648954608497,9.85699042811709,18.9282070909252,15.7108802984769,25.172240573656,20.8078390220172,29.0118743439895,23.4398509926506,35.0667493491679,27.4569121166774,27.0493739547427,66.3481649332798,27.1952841909355,13.277635371514,24.0064969285117,8.18808008937739,13.9481907044722,11.639381121744,8.33154059774431,13.566853434899,14.055794794679,12.2791336707695,11.9484398976276,13.590719119026,9.90767857760913,15.7876173653209,14.6127928955656,15.8115111178609,15.1021018718249,18.1683309066584,9.79360820169904,14.8227133011754,19.7964147567043,5.30980553359851,9.46844481004428,5.74414758233027,11.5049098651098,6.20133975049623,11.9899707698132,13.1798429515793,16.3590178264877,15.329387270543,11.6933600436252,7.37930260024991,10.3135543248187,6.46835250932197,10.443543453816,7.37344497561701,7.93047029616891,8.6896714484714,10.5237602385222,9.05019613311665,9.43841342255258,9.38686832254841,4.66030555900404,15.4369878638473,13.5206727412014,25.8343082713449,14.4751019827574,9.66915986425405,10.0125948844487,9.91034844541493,8.90041449650446,22.7258271461144,13.8279201535359,16.2971184085346,13.7508973613424,19.6839687918276,16.7008066440762,25.6667429290722,25.4711643229058,27.5017947870803,10.5013767981662,8.54107182669065,11.9958485604841,8.7484326065659,11.499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| |||
|short_description=p2@Abi1 | |||
}} |
Latest revision as of 09:20, 26 September 2015
Short description: | p2@Abi1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Abi1_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000123948, ENSMUST00000153931_5end |
EntrezGene: | Abi1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.20e-08 | 12 |
lymphocyte | 1.23e-08 | 13 |
common lymphoid progenitor | 1.23e-08 | 13 |
leukocyte | 2.20e-08 | 17 |
nongranular leukocyte | 2.20e-08 | 17 |
T cell | 5.20e-08 | 11 |
pro-T cell | 5.20e-08 | 11 |
hematopoietic cell | 1.21e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.21e-07 | 32 |
hematopoietic stem cell | 1.21e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.21e-07 | 32 |
mature alpha-beta T cell | 3.12e-07 | 9 |
alpha-beta T cell | 3.12e-07 | 9 |
immature T cell | 3.12e-07 | 9 |
mature T cell | 3.12e-07 | 9 |
immature alpha-beta T cell | 3.12e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.79e-13 | 48 |
immune system | 5.79e-13 | 48 |
hematopoietic system | 4.14e-12 | 45 |
blood island | 4.14e-12 | 45 |
lateral plate mesoderm | 5.98e-10 | 87 |
hemopoietic organ | 1.85e-09 | 29 |
immune organ | 1.85e-09 | 29 |
mesoderm | 6.07e-09 | 120 |
mesoderm-derived structure | 6.07e-09 | 120 |
presumptive mesoderm | 6.07e-09 | 120 |
mixed endoderm/mesoderm-derived structure | 1.90e-08 | 35 |
respiratory system | 3.84e-08 | 42 |
gland of gut | 4.03e-08 | 24 |
thymus | 5.39e-08 | 23 |
neck | 5.39e-08 | 23 |
respiratory system epithelium | 5.39e-08 | 23 |
hemolymphoid system gland | 5.39e-08 | 23 |
pharyngeal epithelium | 5.39e-08 | 23 |
thymic region | 5.39e-08 | 23 |
pharyngeal gland | 5.39e-08 | 23 |
entire pharyngeal arch endoderm | 5.39e-08 | 23 |
thymus primordium | 5.39e-08 | 23 |
early pharyngeal endoderm | 5.39e-08 | 23 |
respiratory tract | 5.52e-08 | 41 |
pharynx | 1.72e-07 | 24 |
upper respiratory tract | 1.72e-07 | 24 |
chordate pharynx | 1.72e-07 | 24 |
pharyngeal arch system | 1.72e-07 | 24 |
pharyngeal region of foregut | 1.72e-07 | 24 |